BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006087
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874971.1| pentatricopeptide repeat-containing protein ...    67   1e-09
gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]                          66   3e-09
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar...    66   3e-09
ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09
gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]              65   7e-09

>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320808|gb|EFH51230.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 802

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/82 (37%), Positives = 50/82 (60%)
 Frame = +2

Query: 14  GHMLDNVTYGTMLHGLCKNQYVDKALSLFHLMRFHGLIPDRNTFNIIIRGCLRNKKYNEA 193
           GH  DN TY  ++ G CK+  +D A+ +F  M+++G +PD   +N ++ G L+ +K  EA
Sbjct: 317 GHEPDNSTYRILIQGCCKSYRMDDAMRIFGEMQYNGFVPDTVVYNCLLDGTLKARKVTEA 376

Query: 194 CKLVDKMVYCGFLADAITSSLL 259
           C+L +KMV  G  A   T ++L
Sbjct: 377 CQLFEKMVQEGVRASCWTYNIL 398


>gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]
          Length = 508

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/82 (36%), Positives = 50/82 (60%)
 Frame = +2

Query: 14  GHMLDNVTYGTMLHGLCKNQYVDKALSLFHLMRFHGLIPDRNTFNIIIRGCLRNKKYNEA 193
           GH  DN TY  ++ G CK+  +D A+ ++  M+++G +PD   +N ++ G L+ +K  EA
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378

Query: 194 CKLVDKMVYCGFLADAITSSLL 259
           C+L +KMV  G  A   T ++L
Sbjct: 379 CQLFEKMVQEGVRASCWTYNIL 400


>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
           [Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
           At4g01570/T15B16_21 [Arabidopsis thaliana]
           gi|332656643|gb|AEE82043.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 805

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/82 (36%), Positives = 50/82 (60%)
 Frame = +2

Query: 14  GHMLDNVTYGTMLHGLCKNQYVDKALSLFHLMRFHGLIPDRNTFNIIIRGCLRNKKYNEA 193
           GH  DN TY  ++ G CK+  +D A+ ++  M+++G +PD   +N ++ G L+ +K  EA
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378

Query: 194 CKLVDKMVYCGFLADAITSSLL 259
           C+L +KMV  G  A   T ++L
Sbjct: 379 CQLFEKMVQEGVRASCWTYNIL 400


>ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/86 (39%), Positives = 53/86 (61%)
 Frame = +2

Query: 2   IQDQGHMLDNVTYGTMLHGLCKNQYVDKALSLFHLMRFHGLIPDRNTFNIIIRGCLRNKK 181
           I D G   + +TY  ML  LCK Q VDKA+ LF+LM   GL P+ +++NI+I G  ++K+
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 182 YNEACKLVDKMVYCGFLADAITSSLL 259
            +EA  L ++M     + D++T + L
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCL 504


>gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
 Frame = +2

Query: 11   QGHMLDNVTYGTMLHGLCKNQYVDKALSLFHLMRFHGLIPDRNTFNIIIRGCLRNKKYNE 190
            +G   D VTY T++ G CK++ V+  + LF  M + GL+ D  T+N +I G  +  K N 
Sbjct: 843  KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 902

Query: 191  ACKLVDKMVYCGFLADAITSSLLQRLLLSEVQDPTLLAIHQKCLRSGM--*LLLMNISLS 364
            A K+ ++MV CG   D +T ++L   L +  +    L + +   +S M   ++  NI + 
Sbjct: 903  AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 962

Query: 365  KLVTPDKI 388
             L   DK+
Sbjct: 963  GLCRTDKL 970