BLASTX nr result
ID: Cnidium21_contig00006087
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00006087 (436 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002874971.1| pentatricopeptide repeat-containing protein ... 67 1e-09 gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana] 66 3e-09 ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar... 66 3e-09 ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containi... 65 4e-09 gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana] 65 7e-09 >ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297320808|gb|EFH51230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 802 Score = 67.4 bits (163), Expect = 1e-09 Identities = 31/82 (37%), Positives = 50/82 (60%) Frame = +2 Query: 14 GHMLDNVTYGTMLHGLCKNQYVDKALSLFHLMRFHGLIPDRNTFNIIIRGCLRNKKYNEA 193 GH DN TY ++ G CK+ +D A+ +F M+++G +PD +N ++ G L+ +K EA Sbjct: 317 GHEPDNSTYRILIQGCCKSYRMDDAMRIFGEMQYNGFVPDTVVYNCLLDGTLKARKVTEA 376 Query: 194 CKLVDKMVYCGFLADAITSSLL 259 C+L +KMV G A T ++L Sbjct: 377 CQLFEKMVQEGVRASCWTYNIL 398 >gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana] Length = 508 Score = 66.2 bits (160), Expect = 3e-09 Identities = 30/82 (36%), Positives = 50/82 (60%) Frame = +2 Query: 14 GHMLDNVTYGTMLHGLCKNQYVDKALSLFHLMRFHGLIPDRNTFNIIIRGCLRNKKYNEA 193 GH DN TY ++ G CK+ +D A+ ++ M+++G +PD +N ++ G L+ +K EA Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378 Query: 194 CKLVDKMVYCGFLADAITSSLL 259 C+L +KMV G A T ++L Sbjct: 379 CQLFEKMVQEGVRASCWTYNIL 400 >ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21 [Arabidopsis thaliana] gi|24797024|gb|AAN64524.1| At4g01570/T15B16_21 [Arabidopsis thaliana] gi|332656643|gb|AEE82043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 805 Score = 66.2 bits (160), Expect = 3e-09 Identities = 30/82 (36%), Positives = 50/82 (60%) Frame = +2 Query: 14 GHMLDNVTYGTMLHGLCKNQYVDKALSLFHLMRFHGLIPDRNTFNIIIRGCLRNKKYNEA 193 GH DN TY ++ G CK+ +D A+ ++ M+++G +PD +N ++ G L+ +K EA Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378 Query: 194 CKLVDKMVYCGFLADAITSSLL 259 C+L +KMV G A T ++L Sbjct: 379 CQLFEKMVQEGVRASCWTYNIL 400 >ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like [Glycine max] Length = 550 Score = 65.5 bits (158), Expect = 4e-09 Identities = 34/86 (39%), Positives = 53/86 (61%) Frame = +2 Query: 2 IQDQGHMLDNVTYGTMLHGLCKNQYVDKALSLFHLMRFHGLIPDRNTFNIIIRGCLRNKK 181 I D G + +TY ML LCK Q VDKA+ LF+LM GL P+ +++NI+I G ++K+ Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478 Query: 182 YNEACKLVDKMVYCGFLADAITSSLL 259 +EA L ++M + D++T + L Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCL 504 >gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana] Length = 1048 Score = 64.7 bits (156), Expect = 7e-09 Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 2/128 (1%) Frame = +2 Query: 11 QGHMLDNVTYGTMLHGLCKNQYVDKALSLFHLMRFHGLIPDRNTFNIIIRGCLRNKKYNE 190 +G D VTY T++ G CK++ V+ + LF M + GL+ D T+N +I G + K N Sbjct: 843 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 902 Query: 191 ACKLVDKMVYCGFLADAITSSLLQRLLLSEVQDPTLLAIHQKCLRSGM--*LLLMNISLS 364 A K+ ++MV CG D +T ++L L + + L + + +S M ++ NI + Sbjct: 903 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 962 Query: 365 KLVTPDKI 388 L DK+ Sbjct: 963 GLCRTDKL 970