BLASTX nr result

ID: Cnidium21_contig00006060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006060
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADO61003.1| sleepy 1 [Helianthus annuus]                           227   2e-57
gb|ADO61004.1| sleepy 1 [Helianthus annuus]                           226   4e-57
ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|2...   223   3e-56
ref|XP_002510145.1| F-box protein GID2, putative [Ricinus commun...   221   2e-55
ref|XP_002285053.2| PREDICTED: F-box protein GID2-like [Vitis vi...   216   4e-54

>gb|ADO61003.1| sleepy 1 [Helianthus annuus]
          Length = 176

 Score =  227 bits (578), Expect = 2e-57
 Identities = 118/173 (68%), Positives = 131/173 (75%), Gaps = 19/173 (10%)
 Frame = -2

Query: 620 KKIK----PESESVEDK-------IESVLLDENLLYEVLKHADARTLGSAACVNKQWHKT 474
           KKI+    PE++ V D          +VLLDENLLYEVLKH DARTLG+A CV+KQWH+T
Sbjct: 3   KKIRADPVPETDPVPDNSPDTPETTTAVLLDENLLYEVLKHVDARTLGAAGCVSKQWHRT 62

Query: 473 SQDERLWELICTKQWANIGCGKQQLRSVVLALGGFRRLHALYLWPLAKPAVVAPV----- 309
           +QDERLWELICTK WANIGCG  QLRSVVLALGGFRRLH+ YLWPL+KP+  A       
Sbjct: 63  AQDERLWELICTKHWANIGCGNTQLRSVVLALGGFRRLHSHYLWPLSKPSSSAATSSSSS 122

Query: 308 TQATTSAWPCLPPP---VTKSGPAKTRWGKDEVHLSLSLLSIRYYEKMNFSSR 159
           T ATTS+WPCLPPP   V     AK RWGKDEV LSLSLLSIRYYEKMNFS+R
Sbjct: 123 TVATTSSWPCLPPPRAIVPAKPTAKARWGKDEVQLSLSLLSIRYYEKMNFSNR 175


>gb|ADO61004.1| sleepy 1 [Helianthus annuus]
          Length = 176

 Score =  226 bits (576), Expect = 4e-57
 Identities = 112/160 (70%), Positives = 124/160 (77%), Gaps = 8/160 (5%)
 Frame = -2

Query: 614 IKPESESVEDKIESVLLDENLLYEVLKHADARTLGSAACVNKQWHKTSQDERLWELICTK 435
           +   S    +   +VLLDENLLYEVLKH DARTLG+A CV+KQWH+T+QDERLWELICTK
Sbjct: 16  VPENSPDTPETTTAVLLDENLLYEVLKHVDARTLGAAGCVSKQWHRTAQDERLWELICTK 75

Query: 434 QWANIGCGKQQLRSVVLALGGFRRLHALYLWPLAKPAVVAPV-----TQATTSAWPCLPP 270
            WANIGCG  QLRSVVLALGGFRRLH+ YLWPL+KP+  A       T ATTS+WPCLPP
Sbjct: 76  HWANIGCGNTQLRSVVLALGGFRRLHSHYLWPLSKPSSSAATSSSSSTVATTSSWPCLPP 135

Query: 269 P---VTKSGPAKTRWGKDEVHLSLSLLSIRYYEKMNFSSR 159
           P   V     AK RWGKDEV LSLSLLSIRYYEKMNFS+R
Sbjct: 136 PRAIVPAKPTAKARWGKDEVQLSLSLLSIRYYEKMNFSNR 175


>ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|222835498|gb|EEE73933.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  223 bits (568), Expect = 3e-56
 Identities = 118/187 (63%), Positives = 141/187 (75%), Gaps = 10/187 (5%)
 Frame = -2

Query: 683 MKRSLISGADSDHLTGADRKMKKIKPESES-VEDKIES--------VLLDENLLYEVLKH 531
           MKR L +G +  + T  D KMKK + + E  ++++IES        + LDENLL+EVLKH
Sbjct: 1   MKRPLDTGPEIHNKT--DMKMKKKRHQEEGEIKEEIESETNTGTGFMNLDENLLFEVLKH 58

Query: 530 ADARTLGSAACVNKQWHKTSQDERLWELICTKQWANIGCGKQQLRSVVLALGGFRRLHAL 351
            DARTLG A+CV+KQWH+T QDERLWELICTK WANIGCG QQLRSVVLALGGFRRLH+ 
Sbjct: 59  VDARTLGRASCVSKQWHRTVQDERLWELICTKHWANIGCGNQQLRSVVLALGGFRRLHSQ 118

Query: 350 YLWPLAKP-AVVAPVTQATTSAWPCLPPPVTKSGPAKTRWGKDEVHLSLSLLSIRYYEKM 174
           YLWPL+KP +  AP + ++ SAW   P  +    PA  RWGKDEVHLSLSLLSIRYYEKM
Sbjct: 119 YLWPLSKPHSTPAPSSSSSPSAWNPFPKMIGNKPPA--RWGKDEVHLSLSLLSIRYYEKM 176

Query: 173 NFSSRGK 153
           NFS+RG+
Sbjct: 177 NFSNRGR 183


>ref|XP_002510145.1| F-box protein GID2, putative [Ricinus communis]
           gi|223550846|gb|EEF52332.1| F-box protein GID2, putative
           [Ricinus communis]
          Length = 179

 Score =  221 bits (562), Expect = 2e-55
 Identities = 118/181 (65%), Positives = 140/181 (77%), Gaps = 6/181 (3%)
 Frame = -2

Query: 683 MKRSLISGADSDHLTGADRKMKK-IKPESES--VEDKIES---VLLDENLLYEVLKHADA 522
           MKRSL +   ++++TG D KMKK IK + E    +++I     V LDENLLYEVLKH DA
Sbjct: 1   MKRSLET--QTENITGQDIKMKKKIKHQGEEKFADEEISGTGFVNLDENLLYEVLKHVDA 58

Query: 521 RTLGSAACVNKQWHKTSQDERLWELICTKQWANIGCGKQQLRSVVLALGGFRRLHALYLW 342
           RTLG AACV+KQWH+T+QDERLWELICT+ WANIGCG QQLRSVVLALGGFRRLH+ YLW
Sbjct: 59  RTLGRAACVSKQWHRTAQDERLWELICTRHWANIGCGNQQLRSVVLALGGFRRLHSQYLW 118

Query: 341 PLAKPAVVAPVTQATTSAWPCLPPPVTKSGPAKTRWGKDEVHLSLSLLSIRYYEKMNFSS 162
           PL+KP   +    +++S+WP   PP+    PA  RWGKDEVHLSLSLLSIRYYEKMNF +
Sbjct: 119 PLSKPQ-SSTSAASSSSSWPSF-PPIRSKPPA--RWGKDEVHLSLSLLSIRYYEKMNFGN 174

Query: 161 R 159
           R
Sbjct: 175 R 175


>ref|XP_002285053.2| PREDICTED: F-box protein GID2-like [Vitis vinifera]
          Length = 184

 Score =  216 bits (550), Expect = 4e-54
 Identities = 113/188 (60%), Positives = 134/188 (71%), Gaps = 11/188 (5%)
 Frame = -2

Query: 683 MKRSLISGADSDHLTGADRKMKKIKPESESVEDKIES-----VLLDENLLYEVLKHADAR 519
           MKR  ++    D L  AD+KMK  K E +  + ++       V LDENLLYEVLKH DAR
Sbjct: 1   MKRPFVA---DDDLESADQKMKNPKLEDDEEDGEVRGETTGFVNLDENLLYEVLKHVDAR 57

Query: 518 TLGSAACVNKQWHKTSQDERLWELICTKQWANIGCGKQQLRSVVLALGGFRRLHALYLWP 339
           TL  A CV+K WH+TSQDERLWELICT+ WANIGCG QQ+RSVVLALGGFRRLH+LYLWP
Sbjct: 58  TLAIAGCVSKLWHRTSQDERLWELICTRHWANIGCGNQQVRSVVLALGGFRRLHSLYLWP 117

Query: 338 LAKPAVVAPVTQATTSAWP--CLPPPVTKSGPAK----TRWGKDEVHLSLSLLSIRYYEK 177
           L+KP   +  +   +S+WP   L PP       +    TRWGKDEVHLSLSLLSIRYYEK
Sbjct: 118 LSKPQ-ASSSSSPPSSSWPSTALSPPFAPHSMMRPKFPTRWGKDEVHLSLSLLSIRYYEK 176

Query: 176 MNFSSRGK 153
           MNF++RG+
Sbjct: 177 MNFNNRGR 184


Top