BLASTX nr result

ID: Cnidium21_contig00006040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006040
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278896.1| PREDICTED: uncharacterized membrane protein ...   367   3e-99
ref|XP_002326733.1| predicted protein [Populus trichocarpa] gi|2...   366   5e-99
ref|XP_002527655.1| conserved hypothetical protein [Ricinus comm...   366   6e-99
ref|XP_003612863.1| Membrane protein, putative [Medicago truncat...   365   8e-99
gb|AFK33460.1| unknown [Medicago truncatula]                          363   3e-98

>ref|XP_002278896.1| PREDICTED: uncharacterized membrane protein At4g09580 [Vitis
            vinifera]
          Length = 254

 Score =  367 bits (942), Expect = 3e-99
 Identities = 185/225 (82%), Positives = 203/225 (90%), Gaps = 1/225 (0%)
 Frame = -3

Query: 1066 VVLGFGVGLSCVYLTMPHSDYSFLKLPRTLNDIQTLRDDLESYTNDYTAQVLTGYCMVYI 887
            VV  F +GL+CVYLTMP SDYSFLKLPR+L DIQ LRD LE YT+DYT QVL GYCMVYI
Sbjct: 30   VVGAFVLGLACVYLTMPASDYSFLKLPRSLEDIQILRDHLEDYTSDYTVQVLVGYCMVYI 89

Query: 886  FMQTFMIPGTVFMSLLAGSLFGVSRGVALVVFNATAGASSCFFLSKLIGRPLLFSLWPDK 707
            FMQTFMIPGTVFMSLLAGSLFGV +GVALVVF ATAGASSC+FLSKLIGRPL+  LWPDK
Sbjct: 90   FMQTFMIPGTVFMSLLAGSLFGVFKGVALVVFTATAGASSCYFLSKLIGRPLVSFLWPDK 149

Query: 706  LSFFQAQVAKRHDSLLNYMLFLRVTPTLPNTFINLASPIVGIPFHIFFFATLVGLIPAAF 527
            LSFFQAQVAKR + LLNYMLFLRVTPTLPNTFIN+ASP+V +P+HIFF AT +GLIPAA+
Sbjct: 150  LSFFQAQVAKRRERLLNYMLFLRVTPTLPNTFINVASPMVDVPYHIFFLATFIGLIPAAY 209

Query: 526  VTVRAGIALGDLRSMGDLYDMHSIATLFLIGIVSVTPTLMN-NKS 395
            VTVRAGIALG+LRS+GDLYD  SIATLFLIG+VSVTPTLM+ NKS
Sbjct: 210  VTVRAGIALGELRSVGDLYDFQSIATLFLIGVVSVTPTLMSKNKS 254


>ref|XP_002326733.1| predicted protein [Populus trichocarpa] gi|222834055|gb|EEE72532.1|
            predicted protein [Populus trichocarpa]
          Length = 249

 Score =  366 bits (940), Expect = 5e-99
 Identities = 182/226 (80%), Positives = 208/226 (92%)
 Frame = -3

Query: 1066 VVLGFGVGLSCVYLTMPHSDYSFLKLPRTLNDIQTLRDDLESYTNDYTAQVLTGYCMVYI 887
            V+LGF +GL  VYLTMP SDYSFLKLPRTL D+Q LRD LE+YT+DYTAQVL GYC+VYI
Sbjct: 25   VLLGFVLGLLGVYLTMPESDYSFLKLPRTLEDLQILRDHLETYTSDYTAQVLVGYCVVYI 84

Query: 886  FMQTFMIPGTVFMSLLAGSLFGVSRGVALVVFNATAGASSCFFLSKLIGRPLLFSLWPDK 707
            FMQTFMIPGTVFMSLLAG+LFGV +GVALVVF ATAGASSC+FLSKLIGRPL+FSLWPDK
Sbjct: 85   FMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKLIGRPLVFSLWPDK 144

Query: 706  LSFFQAQVAKRHDSLLNYMLFLRVTPTLPNTFINLASPIVGIPFHIFFFATLVGLIPAAF 527
            LSFFQ QVA+R   LLNYMLFLR+TPTLPNTFIN+ASPIV +P+HIFF ATL+GL+PAA+
Sbjct: 145  LSFFQEQVARRRGGLLNYMLFLRLTPTLPNTFINVASPIVDVPYHIFFLATLIGLVPAAY 204

Query: 526  VTVRAGIALGDLRSMGDLYDMHSIATLFLIGIVSVTPTLMNNKSKS 389
            VTV+AGIALG+L+S+GDLYD +SIATLFLIGIVS+TPTL+ +KSKS
Sbjct: 205  VTVKAGIALGELQSIGDLYDFNSIATLFLIGIVSITPTLI-SKSKS 249


>ref|XP_002527655.1| conserved hypothetical protein [Ricinus communis]
            gi|223532960|gb|EEF34726.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 263

 Score =  366 bits (939), Expect = 6e-99
 Identities = 181/226 (80%), Positives = 208/226 (92%)
 Frame = -3

Query: 1066 VVLGFGVGLSCVYLTMPHSDYSFLKLPRTLNDIQTLRDDLESYTNDYTAQVLTGYCMVYI 887
            VV GF VGL  VYLTMP SDYSFLKLPR+L D+Q LRD LE+YT+DYTAQVL GYC+VYI
Sbjct: 39   VVFGFVVGLLGVYLTMPPSDYSFLKLPRSLQDLQILRDHLETYTSDYTAQVLIGYCVVYI 98

Query: 886  FMQTFMIPGTVFMSLLAGSLFGVSRGVALVVFNATAGASSCFFLSKLIGRPLLFSLWPDK 707
            FMQTFMIPGTVFMSLLAG+LFGV +GVALVVF ATAGASSC+FLSK+IGRPL+FSLWPDK
Sbjct: 99   FMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKVIGRPLVFSLWPDK 158

Query: 706  LSFFQAQVAKRHDSLLNYMLFLRVTPTLPNTFINLASPIVGIPFHIFFFATLVGLIPAAF 527
            LSFFQ QVA+R DSLLNYMLFLR+TPTLPNTFIN+ASPIV +P+HIFF AT +GLIPAA+
Sbjct: 159  LSFFQEQVARRKDSLLNYMLFLRLTPTLPNTFINVASPIVDVPYHIFFLATFIGLIPAAY 218

Query: 526  VTVRAGIALGDLRSMGDLYDMHSIATLFLIGIVSVTPTLMNNKSKS 389
            VTV+AGIALG+L+S+GDLYD +S+ATLFLIG+VS+TPTLM +KSK+
Sbjct: 219  VTVKAGIALGELQSLGDLYDFNSVATLFLIGVVSITPTLM-SKSKT 263


>ref|XP_003612863.1| Membrane protein, putative [Medicago truncatula]
            gi|355514198|gb|AES95821.1| Membrane protein, putative
            [Medicago truncatula]
          Length = 260

 Score =  365 bits (938), Expect = 8e-99
 Identities = 180/220 (81%), Positives = 201/220 (91%)
 Frame = -3

Query: 1066 VVLGFGVGLSCVYLTMPHSDYSFLKLPRTLNDIQTLRDDLESYTNDYTAQVLTGYCMVYI 887
            V LGF +GL  VYLTMP SDYSFLKLPRTL+D+Q LRD+LESYT+DYTAQVL GYC+VYI
Sbjct: 36   VALGFILGLLGVYLTMPDSDYSFLKLPRTLHDLQLLRDNLESYTSDYTAQVLVGYCVVYI 95

Query: 886  FMQTFMIPGTVFMSLLAGSLFGVSRGVALVVFNATAGASSCFFLSKLIGRPLLFSLWPDK 707
            FMQTFMIPGTVFMSLLAG+LFGV +GVALVVF ATAGASSCFFLSK+IGRPLLFSLWPDK
Sbjct: 96   FMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCFFLSKIIGRPLLFSLWPDK 155

Query: 706  LSFFQAQVAKRHDSLLNYMLFLRVTPTLPNTFINLASPIVGIPFHIFFFATLVGLIPAAF 527
            L FFQ QVAKR  SLLNYMLFLR+TPTLPNTFIN ASPIV +P+HIFF  T++GLIPAA+
Sbjct: 156  LKFFQTQVAKRRKSLLNYMLFLRLTPTLPNTFINFASPIVDVPYHIFFLGTVIGLIPAAY 215

Query: 526  VTVRAGIALGDLRSMGDLYDMHSIATLFLIGIVSVTPTLM 407
            VTVRAG+ALG+L+S+GDLYD +SIATLF IGI+SVTPTLM
Sbjct: 216  VTVRAGLALGELQSVGDLYDFNSIATLFFIGIISVTPTLM 255


>gb|AFK33460.1| unknown [Medicago truncatula]
          Length = 244

 Score =  363 bits (933), Expect = 3e-98
 Identities = 179/220 (81%), Positives = 200/220 (90%)
 Frame = -3

Query: 1066 VVLGFGVGLSCVYLTMPHSDYSFLKLPRTLNDIQTLRDDLESYTNDYTAQVLTGYCMVYI 887
            V LGF +GL  VYLTMP SDYSFLKLPRTL+D+Q LRD+LESYT+DYTAQVL GYC+VYI
Sbjct: 20   VALGFILGLLGVYLTMPDSDYSFLKLPRTLHDLQLLRDNLESYTSDYTAQVLVGYCVVYI 79

Query: 886  FMQTFMIPGTVFMSLLAGSLFGVSRGVALVVFNATAGASSCFFLSKLIGRPLLFSLWPDK 707
            FMQTFMIPGTVFMSLLAG+LFGV +GVALVVF ATAGASSCFFLSK+IGRPLLFSLWPDK
Sbjct: 80   FMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCFFLSKIIGRPLLFSLWPDK 139

Query: 706  LSFFQAQVAKRHDSLLNYMLFLRVTPTLPNTFINLASPIVGIPFHIFFFATLVGLIPAAF 527
            L FFQ QVAKR  SLLNYMLFLR+TPTLPNTFIN ASPIV +P+HIFF  T++GLIPAA+
Sbjct: 140  LKFFQTQVAKRRKSLLNYMLFLRLTPTLPNTFINFASPIVDVPYHIFFLGTVIGLIPAAY 199

Query: 526  VTVRAGIALGDLRSMGDLYDMHSIATLFLIGIVSVTPTLM 407
            VTVRAG+ALG+L+S+GDLYD + IATLF IGI+SVTPTLM
Sbjct: 200  VTVRAGLALGELQSVGDLYDFNPIATLFFIGIISVTPTLM 239


Top