BLASTX nr result

ID: Cnidium21_contig00006033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006033
         (1160 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE20168.1| ribosomal protein S4 [Panax ginseng]                  506   e-141
ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatul...   493   e-137
ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   492   e-137
ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   491   e-136
ref|XP_003516980.1| PREDICTED: 40S ribosomal protein S4-like [Gl...   491   e-136

>dbj|BAE20168.1| ribosomal protein S4 [Panax ginseng]
          Length = 264

 Score =  506 bits (1302), Expect = e-141
 Identities = 246/255 (96%), Positives = 253/255 (99%)
 Frame = -2

Query: 1042 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYRE 863
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 862  VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK 683
            VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE+K
Sbjct: 61   VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 682  FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLENNKIADFIKFDVGNV 503
            FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE NKIADFIKFDVGNV
Sbjct: 121  FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKIADFIKFDVGNV 180

Query: 502  VMVTGGRNTGRVGILKNREKHKGSFETVHIQDNLGHEFATRLSNVFTIGKGSRPWVSLPK 323
            VMVTGGRNTGRVG++KNREKHKGSFETVHIQD+LGHEFATRL NVFTIGKG++PWVSLPK
Sbjct: 181  VMVTGGRNTGRVGVIKNREKHKGSFETVHIQDSLGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 322  GKGIKLTIIEEARKR 278
            GKGIKLTIIEEARKR
Sbjct: 241  GKGIKLTIIEEARKR 255


>ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatula]
            gi|355505623|gb|AES86765.1| 40S ribosomal protein S4
            [Medicago truncatula]
          Length = 264

 Score =  493 bits (1269), Expect = e-137
 Identities = 236/255 (92%), Positives = 249/255 (97%)
 Frame = -2

Query: 1042 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYRE 863
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 862  VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK 683
            V +ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRD+E+K
Sbjct: 61   VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 682  FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLENNKIADFIKFDVGNV 503
            FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLENNKI DFIKFDVGNV
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNV 180

Query: 502  VMVTGGRNTGRVGILKNREKHKGSFETVHIQDNLGHEFATRLSNVFTIGKGSRPWVSLPK 323
            VMVTGGRN GRVG++KNREKHKG+FET+H+QD  GHEFATRL NVFTIGKG++PWVSLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 322  GKGIKLTIIEEARKR 278
            GKGIKLT+IEEARKR
Sbjct: 241  GKGIKLTVIEEARKR 255


>ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
            gi|449496881|ref|XP_004160252.1| PREDICTED: 40S ribosomal
            protein S4-like [Cucumis sativus]
          Length = 264

 Score =  492 bits (1266), Expect = e-137
 Identities = 237/255 (92%), Positives = 250/255 (98%)
 Frame = -2

Query: 1042 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYRE 863
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 862  VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK 683
            V +ILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE+K
Sbjct: 61   VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 682  FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLENNKIADFIKFDVGNV 503
            +KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIADFIKFDVGNV
Sbjct: 121  YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 502  VMVTGGRNTGRVGILKNREKHKGSFETVHIQDNLGHEFATRLSNVFTIGKGSRPWVSLPK 323
            VMVTGGRN GRVG++KNREKHKGSFET+HIQD  GHEFATRL NVFTIGKG++PWVSLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 322  GKGIKLTIIEEARKR 278
            GKGIKL+IIEEARKR
Sbjct: 241  GKGIKLSIIEEARKR 255


>ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  491 bits (1265), Expect = e-136
 Identities = 237/255 (92%), Positives = 249/255 (97%)
 Frame = -2

Query: 1042 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYRE 863
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 862  VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK 683
            V +ILMQRHVLVD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61   VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 682  FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLENNKIADFIKFDVGNV 503
            FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIADFIKFDVGNV
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 502  VMVTGGRNTGRVGILKNREKHKGSFETVHIQDNLGHEFATRLSNVFTIGKGSRPWVSLPK 323
            VMVTGGRN GRVG++KNREKHKGSFET+HIQD  GHEFATRL NVFTIGKG++PWVSLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 322  GKGIKLTIIEEARKR 278
            GKGIKLTIIEEARKR
Sbjct: 241  GKGIKLTIIEEARKR 255


>ref|XP_003516980.1| PREDICTED: 40S ribosomal protein S4-like [Glycine max]
          Length = 264

 Score =  491 bits (1263), Expect = e-136
 Identities = 236/255 (92%), Positives = 248/255 (97%)
 Frame = -2

Query: 1042 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYRE 863
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 862  VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK 683
            V +ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK
Sbjct: 61   VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK 120

Query: 682  FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLENNKIADFIKFDVGNV 503
            FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI DFIKFDVGNV
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180

Query: 502  VMVTGGRNTGRVGILKNREKHKGSFETVHIQDNLGHEFATRLSNVFTIGKGSRPWVSLPK 323
            VMVTGGRN GRVG++KNREKHKGSFET+H+QD  GHEFATR+ NVF IGKG++PWVSLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFIIGKGTKPWVSLPK 240

Query: 322  GKGIKLTIIEEARKR 278
            GKGIKL+IIEEARKR
Sbjct: 241  GKGIKLSIIEEARKR 255


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