BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006019
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin...   395   e-108
ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin...   381   e-103
ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin...   376   e-102
ref|XP_002511264.1| nucleic acid binding protein, putative [Rici...   376   e-102
ref|XP_002318105.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101

>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
            [Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
            protein product [Vitis vinifera]
          Length = 484

 Score =  395 bits (1016), Expect = e-108
 Identities = 191/366 (52%), Positives = 245/366 (66%), Gaps = 39/366 (10%)
 Frame = +1

Query: 52   RNGKEQYDEEPHWSGNAK------------RDSVGLNDGNFGSYLYPLRPDAEDCSFFMR 195
            R  +++ DEE   +G  K             D     D     + YP+RPDA DCSF++R
Sbjct: 81   REEEKEEDEESDSNGEVKASDDEEEQCENLEDESAAKDDKSARFQYPVRPDAVDCSFYLR 140

Query: 196  TGTCKFGSNCKFNHPLK-KNQAARDTFKQKE--EIYDSPGQTECKYYLSSGGCKYGKACR 366
            TGTCKFGSNCKFNHP++ KNQ A++  K+KE  E  + PGQTECKYYL +GGCK+GKACR
Sbjct: 141  TGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACR 200

Query: 367  YNHGKGKAAVTPNSELNFLGLPIRVGEKECAYYMQNGSCKYGSNCRFHHPDPTVAGGGDT 546
            YNH K K +  P  ELNFLGLPIR+GEKEC YYM+ GSCKYG+NCRF+HPDPT AGG ++
Sbjct: 201  YNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYES 260

Query: 547  AAPGRDG----------------TSARTLNKTAPFRPVIYPPNPSA-PPNAEWNGYQAPV 675
             +   +G                +S R LN+ APF P+++ P     PPN EWNGYQAP+
Sbjct: 261  PSGYGNGGSVPLQGASQSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQAPL 320

Query: 676  Y--PTPGRSLPIPPGLALNIPATGSNFYAH--PRSQLIVDEFPERPGQPECKFYLKTGDC 843
            Y  P P RS+  PP   +N  AT +N Y H   + Q ++++FPERPGQPEC ++LKTGDC
Sbjct: 321  YPPPPPERSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDC 380

Query: 844  KYRSSCKFDHPKT---LKTSVTRSDEGLPLRPGQSICSHFSRFGICKFGPSCKYDHSVTN 1014
            K+R++CK+ HPK         T SD+GLPLRP Q+IC+H++R+GICKFGP+CK+DH V  
Sbjct: 381  KFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHPVNY 440

Query: 1015 GTSASS 1032
            G SAS+
Sbjct: 441  GNSASA 446


>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
            [Vitis vinifera]
          Length = 481

 Score =  381 bits (978), Expect = e-103
 Identities = 186/364 (51%), Positives = 240/364 (65%), Gaps = 37/364 (10%)
 Frame = +1

Query: 52   RNGKEQYDEEPHWSGNAK------------RDSVGLNDGNFGSYLYPLRPDAEDCSFFMR 195
            R  +++ DEE   +G  K             D     D     + YP+RPDA DCSF++R
Sbjct: 81   REEEKEEDEESDSNGEVKASDDEEEQCENLEDESAAKDDKSARFQYPVRPDAVDCSFYLR 140

Query: 196  TGTCKFGSNCKFNHPLK-KNQAARDTFKQKE--EIYDSPGQTECKYYLSSGGCKYGKACR 366
            TGTCKFGSNCKFNHP++ KNQ A++  K+KE  E  + PGQTECKYYL +GGCK+GKACR
Sbjct: 141  TGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACR 200

Query: 367  YNHGKGKAAVTPNSELNFLGLPIRVGEKECAYYMQNGSCKYGSNCRFHHPDPTVAGGGDT 546
            YNH K K +  P  ELNFLGLPIR+GEKEC YYM+ GSCKYG+NCRF+HPDPT AGG ++
Sbjct: 201  YNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYES 260

Query: 547  AAPGRDG----------------TSARTLNKTAPFRPVIYPPNPSA-PPNAEWNGYQAPV 675
             +   +G                +S R LN+ APF P+++ P     PPN EWNGYQ  +
Sbjct: 261  PSGYGNGGSVPLQGASQSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQVFM 320

Query: 676  YPTPGRSLPIPPGLALNIPATGSNFYAH--PRSQLIVDEFPERPGQPECKFYLKTGDCKY 849
                 RS+  PP   +N  AT +N Y H   + Q ++++FPERPGQPEC ++LKTGDCK+
Sbjct: 321  LLLK-RSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKF 379

Query: 850  RSSCKFDHPKT---LKTSVTRSDEGLPLRPGQSICSHFSRFGICKFGPSCKYDHSVTNGT 1020
            R++CK+ HPK         T SD+GLPLRP Q+IC+H++R+GICKFGP+CK+DH V  G 
Sbjct: 380  RAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHPVNYGN 439

Query: 1021 SASS 1032
            SAS+
Sbjct: 440  SASA 443


>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
            [Glycine max]
          Length = 570

 Score =  376 bits (966), Expect = e-102
 Identities = 173/305 (56%), Positives = 226/305 (74%), Gaps = 21/305 (6%)
 Frame = +1

Query: 151  YPLRPDAEDCSFFMRTGTCKFGSNCKFNHPLK-KNQAARDTFKQKEEIYDSPGQTECKYY 327
            YPLRP+AEDC+F+++TGTCKFG NCKFNHPL+ KNQA ++   ++EE  +  GQ ECKYY
Sbjct: 230  YPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRKNQAKKENAGEREEQAERSGQMECKYY 289

Query: 328  LSSGGCKYGKACRYNHGKGKAAVTPNSELNFLGLPIRVGEKECAYYMQNGSCKYGSNCRF 507
            L SGGCK+GKAC++NH +GK++    +ELNFLGLPIRVGEKEC YYM+ GSCK+G+NCRF
Sbjct: 290  LRSGGCKFGKACKFNHTRGKSSSASATELNFLGLPIRVGEKECLYYMRTGSCKFGANCRF 349

Query: 508  HHPDPTVAGGGDTAAPGRDG----------------TSARTLNKTAPFRPVIYPPNPS-A 636
            +HPDPT  GGGD+ +   +G                +S R LN++APF PVI  PNP  +
Sbjct: 350  NHPDPTTVGGGDSPSGYGNGSSISLQGVSQSSISSWSSTRPLNESAPFVPVILSPNPGVS 409

Query: 637  PPNAEWNGYQAPVYPTPGRSLPIPPGLALNIPATGSNFYAHPRSQLIVDEFPERPGQPEC 816
            P ++EWNGYQAPVY +  RSL  P    +N PA  SN Y H + Q++V+EFPERPG+PEC
Sbjct: 410  PQSSEWNGYQAPVYLSE-RSLHPPSTYVMNNPAMESNVYMHHQKQMLVEEFPERPGEPEC 468

Query: 817  KFYLKTGDCKYRSSCKFDHPKTLKTSV---TRSDEGLPLRPGQSICSHFSRFGICKFGPS 987
             ++LKTGDCK++S+CKF HPK     +     SD+GLPLRP Q++C+++ R+GICKFGP+
Sbjct: 469  SYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTYYRRYGICKFGPA 528

Query: 988  CKYDH 1002
            CK+DH
Sbjct: 529  CKFDH 533



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
 Frame = +1

Query: 232 NHPLKKNQAARDTFKQK--EEIYDSPGQTECKYYLSSGGCKYGKACRYNHGKGKAAVTPN 405
           N+P  ++       KQ   EE  + PG+ EC Y+L +G CK+   C+++H K + A  P 
Sbjct: 438 NNPAMESNVYMHHQKQMLVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPL 497

Query: 406 SELNFLGLPIRVGEKECAYYMQNGSCKYGSNCRFHHPDPTVAGGGD 543
             L+  GLP+R  +  C YY + G CK+G  C+F HP P+   G D
Sbjct: 498 CNLSDKGLPLRPDQNVCTYYRRYGICKFGPACKFDHPAPSTMAGHD 543



 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
 Frame = +1

Query: 763  RSQLIVDEFPERPGQPECKFYLKTGDCKYRSSCKFDHPKTLKTSVTRSDEG----LPLRP 930
            RS     ++P RP   +C FYLKTG CK+  +CKF+HP   K    + + G       R 
Sbjct: 222  RSSGRAQQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRKNQAKKENAGEREEQAERS 281

Query: 931  GQSICSHFSRFGICKFGPSCKYDHSVTNGTSASS 1032
            GQ  C ++ R G CKFG +CK++H+    +SAS+
Sbjct: 282  GQMECKYYLRSGGCKFGKACKFNHTRGKSSSASA 315


>ref|XP_002511264.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223550379|gb|EEF51866.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 495

 Score =  376 bits (966), Expect = e-102
 Identities = 187/384 (48%), Positives = 244/384 (63%), Gaps = 45/384 (11%)
 Frame = +1

Query: 19   WYGNAEGNSVRRNGKEQYDEEPHWSGNAKRDSVGLNDGN------------------FGS 144
            W+ +   NS   NG E+  E+ +   N   D VG +D +                     
Sbjct: 81   WHQDDGFNSGESNGGEE--EQEYNINNNDYDKVGNDDDDDDDVEKKDERSNNGVNRRHNQ 138

Query: 145  YLYPLRPDAEDCSFFMRTGTCKFGSNCKFNHPLK-KNQAARDTFKQKEEIYDSPGQTECK 321
            Y YP+RP+AEDCS++M+TGTCKFGSNCKFNHP+K K Q +++  K++EE  D PGQTECK
Sbjct: 139  YQYPVRPEAEDCSYYMKTGTCKFGSNCKFNHPVKRKMQVSKEKVKEREEATDRPGQTECK 198

Query: 322  YYLSSGGCKYGKACRYNHGKGK-------AAVTPNSELNFLGLPIRVGEKECAYYMQNGS 480
            YYL +GGCKYGKACRYNH + K        AV P  +LNFLGLPIR GE+EC YYM+NGS
Sbjct: 199  YYLRTGGCKYGKACRYNHSRAKPLLLQAKTAVFPALDLNFLGLPIRPGERECPYYMRNGS 258

Query: 481  CKYGSNCRFHHPDPTVAGGGDTAAPGRDG---------------TSARTLNKTAPFRPVI 615
            CKYG+NCRF+HPDPT  GG D  A    G               +S   LN+T  F  ++
Sbjct: 259  CKYGANCRFNHPDPTTVGGSDPLAFSNGGSASLQNSLQSNIASWSSPGGLNETPSFMSIM 318

Query: 616  YPPNPSAP-PNAEWNGYQAPVYPTPGRSLPIPPGLALNIPATGSNFYAHPRSQLIVDEFP 792
            + P    P  N EWNGYQ   +P   RS+  PP   ++ PAT +N YAH + Q+ V+EFP
Sbjct: 319  FSPTQGVPSQNPEWNGYQVCYFPLYERSMHQPPAYVISNPATDTNVYAH-QQQIQVEEFP 377

Query: 793  ERPGQPECKFYLKTGDCKYRSSCKFDHPK---TLKTSVTRSDEGLPLRPGQSICSHFSRF 963
            ERPGQPEC +++KTGDCK++S+CK+ HPK   +       SD+GLPLRPGQ+ICS++SR+
Sbjct: 378  ERPGQPECSYFMKTGDCKFKSNCKYHHPKNHISKSPPCVLSDKGLPLRPGQNICSYYSRY 437

Query: 964  GICKFGPSCKYDHSVTNGTSASSN 1035
            GICKFGP+CK+DH +   +S + +
Sbjct: 438  GICKFGPACKFDHPIQPVSSTTGS 461


>ref|XP_002318105.1| predicted protein [Populus trichocarpa] gi|222858778|gb|EEE96325.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  373 bits (958), Expect = e-101
 Identities = 178/335 (53%), Positives = 233/335 (69%), Gaps = 31/335 (9%)
 Frame = +1

Query: 124  NDGNFGSYLYPLRPDAEDCSFFMRTGTCKFGSNCKFNHPLK-KNQA---ARDTFKQKEEI 291
            N+ + G + YP+RP+AEDC+F+M+TGTCKFG+NCKFNHPL+ KNQ     ++  K++EE 
Sbjct: 114  NNNSSGYHQYPVRPEAEDCAFYMKTGTCKFGANCKFNHPLRRKNQVQLTVKEKTKEREEA 173

Query: 292  YDSPGQTECKYYLSSGGCKYGKACRYNHGKGKAAV-------TPNSELNFLGLPIRVGEK 450
             + P   ECKYYL +GGCKYG ACR+NH + K +V       +P  ELNFLGLPIR+GEK
Sbjct: 174  TEKPSLIECKYYLKTGGCKYGTACRFNHSRAKYSVPPVKIPMSPALELNFLGLPIRLGEK 233

Query: 451  ECAYYMQNGSCKYGSNCRFHHPDPTVAGGGDTAAPGRDGTSA----------------RT 582
            EC Y+M+NGSCK+G+NC+++HPDPT  GG D  +   +G SA                R 
Sbjct: 234  ECEYFMRNGSCKFGANCKYNHPDPTAVGGSDHPSTFLNGGSASLPVPSSSSVGSWSSPRA 293

Query: 583  LNKTAPFRPVIYPPNPSAPPNA-EWNGYQAPVYPTPGRSLPIPPGLALNIPATGSNFYAH 759
            LN    F P+++ PN   PP + +WNGYQAP+YP P RSL  P   AL   AT SN YA 
Sbjct: 294  LNDPTSFVPIMFSPNQGVPPQSPDWNGYQAPLYP-PERSLHPPLSYALINIATESNVYAP 352

Query: 760  PRSQLIVDEFPERPGQPECKFYLKTGDCKYRSSCKFDHPK---TLKTSVTRSDEGLPLRP 930
             + Q++VDEFPERPGQP+C FY+K GDCK++S+CK+ HPK   +    +T SD+GLPLRP
Sbjct: 353  QQQQIVVDEFPERPGQPQCSFYMKFGDCKFKSNCKYHHPKNRISKSPPLTLSDKGLPLRP 412

Query: 931  GQSICSHFSRFGICKFGPSCKYDHSVTNGTSASSN 1035
             Q+ICSH+SR+GICKFGPSCK+DHS+   +S  S+
Sbjct: 413  DQNICSHYSRYGICKFGPSCKFDHSIQPASSIGSS 447



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 29/87 (33%), Positives = 47/87 (54%)
 Frame = +1

Query: 151 YPLRPDAEDCSFFMRTGTCKFGSNCKFNHPLKKNQAARDTFKQKEEIYDSPGQTECKYYL 330
           +P RP    CSF+M+ G CKF SNCK++HP  +   +       + +   P Q  C +Y 
Sbjct: 362 FPERPGQPQCSFYMKFGDCKFKSNCKYHHPKNRISKSPPLTLSDKGLPLRPDQNICSHYS 421

Query: 331 SSGGCKYGKACRYNHGKGKAAVTPNSE 411
             G CK+G +C+++H    A+   +S+
Sbjct: 422 RYGICKFGPSCKFDHSIQPASSIGSSD 448