BLASTX nr result

ID: Cnidium21_contig00005998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005998
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]   122   1e-27
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]   119   1e-26
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   124   3e-26
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]   117   4e-26
ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820...   121   3e-25

>emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]
          Length = 332

 Score =  122 bits (306), Expect(2) = 1e-27
 Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 23/256 (8%)
 Frame = +2

Query: 266 KIMEIQLASKRKLGFVEGTELMR--TTGLTKAVQWDTCNNIVISWIHNNVCDTIKQSILF 439
           + M I L +K KLGF++GT  M   T    +   W  CN++++SWI N++   +  S++F
Sbjct: 45  RAMTISLNAKSKLGFIDGTTTMSSATDKPDEHASWKKCNDMILSWILNSLSQDLADSVIF 104

Query: 440 VNTTSEIWKILEKRFQLSNGSRKYKLNRDLYNSKQNGKTLVEYYTSLSTLWEEIEAMNVL 619
             T  E+W+ L  RF  SN  R +++ RD+    Q+  T+  YYT L  LW+E+ + N  
Sbjct: 105 STTAQEVWEDLRDRFSQSNAPRIFQIERDIACLTQDQMTVAAYYTRLKKLWDELGSYN-- 162

Query: 620 PSLTTTSDENKALLTAIQVQKD*SKLFQSFNGLDEMFSPQRSQLLMLSPLPSVEMACAAI 799
            ++ +   ++K             +L Q   GL+E ++  R Q+L+++PLP V  A ++I
Sbjct: 163 DTVCSCGADHKR-----------RRLMQFLMGLNESYNAIRGQILLMNPLPDVARAYSSI 211

Query: 800 QQEESHRDVLHT-VNEDISAMF--------------------SKGVATQPETCTECKKRC 916
            QEE  R +  T    + SAM                     S     +P  C+ C +  
Sbjct: 212 VQEEKQRSLGATRETTENSAMVVQRAEPMALAVRHGQGSSSRSNPSNRKPLHCSYCDRDH 271

Query: 917 HTADVCWSVVGYPKWH 964
           H  + CW + GYP  H
Sbjct: 272 HVRETCWKLNGYPPEH 287



 Score = 27.7 bits (60), Expect(2) = 1e-27
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 171 DMQNPLFLHPSDSPISISVTKLQGAADYRT*RRSWRFS 284
           D  NP FLH SD P  + V+K     +Y T  R+   S
Sbjct: 13  DAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTIS 50


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score =  119 bits (297), Expect(2) = 1e-26
 Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 23/256 (8%)
 Frame = +2

Query: 266 KIMEIQLASKRKLGFVEGTELM--RTTGLTKAVQWDTCNNIVISWIHNNVCDTIKQSILF 439
           + M I L +K KLGF++GT  M   T    +   W  CN++++SWI N++   +  S++F
Sbjct: 45  RAMTISLNAKSKLGFIDGTTTMPSATDKPDEHASWKKCNDMILSWILNSLSQDLADSVIF 104

Query: 440 VNTTSEIWKILEKRFQLSNGSRKYKLNRDLYNSKQNGKTLVEYYTSLSTLWEEIEAMNVL 619
             T  E+W+ L  RF  SN  R + +  D+    Q+  T+  YYT L  LW+E+ + N  
Sbjct: 105 STTAQEVWEDLXDRFSQSNAPRIFXIEXDIACLTQDQMTVAAYYTRLKKLWDELGSYN-- 162

Query: 620 PSLTTTSDENKALLTAIQVQKD*SKLFQSFNGLDEMFSPQRSQLLMLSPLPSVEMACAAI 799
            ++ +   ++K             +L Q   GL+E ++  R Q+L+++PLP V  A ++I
Sbjct: 163 DTVCSCGADHKR-----------XRLMQFLMGLNESYNAIRGQILLMNPLPDVAKAYSSI 211

Query: 800 QQEESHRDVLHT-VNEDISAMF--------------------SKGVATQPETCTECKKRC 916
            QEE  R +  T    + SAM                     S     +P  C+ C +  
Sbjct: 212 VQEEKQRSLGATRETTENSAMVVQRAEPMALAVRHGQGSSSRSNPSNRKPLHCSYCDRDH 271

Query: 917 HTADVCWSVVGYPKWH 964
           H  + CW + GYP  H
Sbjct: 272 HVRETCWKLNGYPPEH 287



 Score = 27.7 bits (60), Expect(2) = 1e-26
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 171 DMQNPLFLHPSDSPISISVTKLQGAADYRT*RRSWRFS 284
           D  NP FLH SD P  + V+K     +Y T  R+   S
Sbjct: 13  DAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTIS 50


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score =  124 bits (312), Expect = 3e-26
 Identities = 74/243 (30%), Positives = 127/243 (52%), Gaps = 15/243 (6%)
 Frame = +2

Query: 272 MEIQLASKRKLGFVEGTELMRTTGLTKAVQWDTCNNIVISWIHNNVCDTIKQSILFVNTT 451
           M + L +K K+ FV+GT             W  CN++V SWI N+V   I +SIL  N  
Sbjct: 93  MFVSLYAKNKIAFVDGTLPRPPESDPSFRVWSRCNSMVKSWILNSVTKQIYKSILRFNDA 152

Query: 452 SEIWKILEKRFQLSNGSRKYKLNRDLYNSKQNGKTLVEYYTSLSTLWEEIEAMNVLPSLT 631
           +EIWK L+ RF ++N  R Y+L + +++ +Q   +L +YYT+L TLW++++  +    ++
Sbjct: 153 AEIWKDLDTRFHITNLPRSYQLTQQIWSLQQGTMSLSDYYTALKTLWDDLDGAS---CVS 209

Query: 632 TTSDENKALLTAIQVQKD*SKLFQSFNGLDEMFSPQRSQLLMLSPLPSVEMACAAIQQEE 811
           T  +    + TA  ++   SK+ +  +GL+E +S  RSQ++M   +P +      + Q+ 
Sbjct: 210 TCKNCTCCIATASMIEH--SKIVKFLSGLNESYSTIRSQIIMKKTIPDLAEIYNLLDQDH 267

Query: 812 SHRDVL------HTVN------EDISAMFSKGVATQPE---TCTECKKRCHTADVCWSVV 946
           S R+++       T N      +  +   +K   TQP+    C+ C    H AD C+ + 
Sbjct: 268 SQRNIVTMPTNASTFNVSAPQSDQFAVNLAKSFGTQPKPKVQCSHCGYTGHNADTCYKIH 327

Query: 947 GYP 955
           GYP
Sbjct: 328 GYP 330


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score =  117 bits (293), Expect(2) = 4e-26
 Identities = 75/257 (29%), Positives = 124/257 (48%), Gaps = 24/257 (9%)
 Frame = +2

Query: 266 KIMEIQLASKRKLGFVEGTELM--RTTGLTKAVQWDTCNNIVISWIHNNVCDTIKQSILF 439
           + M I L +K KLGF++GT  M   T    +   W  CN++++SWI N++   +  S++F
Sbjct: 45  RAMTISLNAKSKLGFIDGTTTMPSATDKPBEHASWKKCNDMILSWILNSLSQDLADSVIF 104

Query: 440 VNTTSEIWKILEKRFQLSNGSRKYKLNRDLYNSKQNGKTLVEYYTSLSTLWEEIEAMNVL 619
             T  E+W+ L   F  SN  R +++ RD+    Q+  T+  YYT L  LW+E+ + N  
Sbjct: 105 STTAQEVWEDLRDHFSQSNAPRIFQIERDIACLTQDQMTVXAYYTRLKKLWDELGSYN-- 162

Query: 620 PSLTTTSDENKALLTAIQVQKD*SKLFQSFNGLDEMFSPQRSQLLMLSPLPSVEMACAAI 799
            ++ +   ++K             +L Q   GL+E ++  R Q+L+++PLP V  A ++I
Sbjct: 163 DTVCSCGADHKR-----------RRLMQFLMGLNESYNAIRGQILLMNPLPDVAKAYSSI 211

Query: 800 QQEESHRDVLHTVNE--DISAM-------------FSKGVATQPET-------CTECKKR 913
            QE   R  L  + E  + SAM               +G +++          CT C + 
Sbjct: 212 VQEXKQRS-LGAIRETTENSAMVVQRAEPMALXVRXGQGSSSRSNPSNRKSLHCTYCDRD 270

Query: 914 CHTADVCWSVVGYPKWH 964
            H  + CW + GYP  H
Sbjct: 271 HHVRETCWKLNGYPPEH 287



 Score = 27.7 bits (60), Expect(2) = 4e-26
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 171 DMQNPLFLHPSDSPISISVTKLQGAADYRT*RRSWRFS 284
           D  NP FLH SD P  + V+K     +Y T  R+   S
Sbjct: 13  DAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTIS 50


>ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820591 [Glycine max]
          Length = 1057

 Score =  121 bits (303), Expect = 3e-25
 Identities = 75/229 (32%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
 Frame = +2

Query: 278 IQLASKRKLGFVEGTELMRTTGLTKAVQWDTCNNIVISWIHNNVCDTIKQSILFVNTTSE 457
           +  + K K+ F++G+  M TT       W   NN+VISW++N+V   I  SILF NT  E
Sbjct: 2   VAFSVKNKVAFIDGSLPMPTTVDPTYAAWTCGNNLVISWLYNSVFKDIISSILFANTAKE 61

Query: 458 IWKILEKRFQLSNGSRKYKLNRDLYNSKQNGKTLVEYYTSLSTLWEEIEAMNVLPSLTTT 637
           IW+ L+ RF   NG R ++L R L + +Q       YYT L ++WEE+      P+    
Sbjct: 62  IWEDLKTRFSRKNGPRIFQLKRQLMSLQQGNDDASTYYTKLKSVWEELSGYK--PTFRCK 119

Query: 638 SDENKALLTAIQVQKD*SKLFQSF-NGLDEMFSPQRSQLLMLSPLPSVEMACAAIQQEES 814
               + L   I+     S+   SF  GL++ F+  R Q+L+  PLP +    + + QEE+
Sbjct: 120 CGGLQTLQDYIE-----SEYVMSFLMGLNDSFAQVRGQILLSDPLPPIGNVFSLVIQEEA 174

Query: 815 HRDVL--HTVNEDISAMFSKGVATQPETCTECKKRCHTADVCWSVVGYP 955
            R+++  H    + + M  K    +   C  C    HT D C+ +VGYP
Sbjct: 175 QREIVVNHIPYLNSNTMAKK----ERPQCAHCNLLGHTKDKCYKLVGYP 219


Top