BLASTX nr result
ID: Cnidium21_contig00005979
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00005979 (522 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003599987.1| DNA polymerase [Medicago truncatula] gi|3554... 95 7e-18 ref|XP_003599989.1| DNA polymerase [Medicago truncatula] gi|3554... 93 2e-17 gb|AAG50942.1|AC079284_17 DNA polymerase A family protein, putat... 89 3e-16 ref|NP_175498.2| polymerase gamma 2 [Arabidopsis thaliana] gi|33... 89 3e-16 ref|XP_002891595.1| hypothetical protein ARALYDRAFT_474208 [Arab... 89 3e-16 >ref|XP_003599987.1| DNA polymerase [Medicago truncatula] gi|355489035|gb|AES70238.1| DNA polymerase [Medicago truncatula] Length = 1112 Score = 94.7 bits (234), Expect = 7e-18 Identities = 45/49 (91%), Positives = 48/49 (97%) Frame = -3 Query: 520 VILEGPTESAEVAKDIVVDCMSKPFNGQNILKVGLSVDAKFAQNWYAAK 374 VILEGPTESAEVAK+IV+DCMSKPFNGQNILKVGL+VDAK AQNWYAAK Sbjct: 1064 VILEGPTESAEVAKNIVIDCMSKPFNGQNILKVGLTVDAKCAQNWYAAK 1112 >ref|XP_003599989.1| DNA polymerase [Medicago truncatula] gi|355489037|gb|AES70240.1| DNA polymerase [Medicago truncatula] Length = 1098 Score = 93.2 bits (230), Expect = 2e-17 Identities = 44/49 (89%), Positives = 48/49 (97%) Frame = -3 Query: 520 VILEGPTESAEVAKDIVVDCMSKPFNGQNILKVGLSVDAKFAQNWYAAK 374 VILEGPT+SAEVAK+IV+DCMSKPFNGQNILKVGL+VDAK AQNWYAAK Sbjct: 1050 VILEGPTKSAEVAKNIVIDCMSKPFNGQNILKVGLTVDAKCAQNWYAAK 1098 >gb|AAG50942.1|AC079284_17 DNA polymerase A family protein, putative [Arabidopsis thaliana] Length = 1067 Score = 89.4 bits (220), Expect = 3e-16 Identities = 43/49 (87%), Positives = 45/49 (91%) Frame = -3 Query: 520 VILEGPTESAEVAKDIVVDCMSKPFNGQNILKVGLSVDAKFAQNWYAAK 374 VILEGP ESAE+AKDIVVDCMSKPFNG+NIL V LSVDAK AQNWYAAK Sbjct: 1019 VILEGPIESAEIAKDIVVDCMSKPFNGRNILSVDLSVDAKCAQNWYAAK 1067 >ref|NP_175498.2| polymerase gamma 2 [Arabidopsis thaliana] gi|332194474|gb|AEE32595.1| polymerase gamma 2 [Arabidopsis thaliana] Length = 1050 Score = 89.4 bits (220), Expect = 3e-16 Identities = 43/49 (87%), Positives = 45/49 (91%) Frame = -3 Query: 520 VILEGPTESAEVAKDIVVDCMSKPFNGQNILKVGLSVDAKFAQNWYAAK 374 VILEGP ESAE+AKDIVVDCMSKPFNG+NIL V LSVDAK AQNWYAAK Sbjct: 1002 VILEGPIESAEIAKDIVVDCMSKPFNGRNILSVDLSVDAKCAQNWYAAK 1050 >ref|XP_002891595.1| hypothetical protein ARALYDRAFT_474208 [Arabidopsis lyrata subsp. lyrata] gi|297337437|gb|EFH67854.1| hypothetical protein ARALYDRAFT_474208 [Arabidopsis lyrata subsp. lyrata] Length = 1047 Score = 89.4 bits (220), Expect = 3e-16 Identities = 43/49 (87%), Positives = 45/49 (91%) Frame = -3 Query: 520 VILEGPTESAEVAKDIVVDCMSKPFNGQNILKVGLSVDAKFAQNWYAAK 374 VILEGP ESAE+AKDIVVDCMSKPFNG+NIL V LSVDAK AQNWYAAK Sbjct: 999 VILEGPIESAEIAKDIVVDCMSKPFNGRNILSVDLSVDAKCAQNWYAAK 1047