BLASTX nr result

ID: Cnidium21_contig00005962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005962
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM78522.1| SUPPRESSOR OF GENE SILENCING 3 [Nicotiana tabacum]     67   2e-09
dbj|BAM78523.1| SUPPRESSOR OF GENE SILENCING 3 [Nicotiana tabacum]     64   1e-08
ref|NP_001234711.1| protein SUPPRESSOR OF GENE SILENCING 3 [Sola...    61   8e-08
emb|CBI27700.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENC...    60   2e-07

>dbj|BAM78522.1| SUPPRESSOR OF GENE SILENCING 3 [Nicotiana tabacum]
          Length = 635

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/69 (47%), Positives = 49/69 (71%)
 Frame = -1

Query: 477 KDRQFRSEQGATLILSQQKAMDNFADERDKLVKDLVDRKTELIRQRYEEDVKLEKEFDEE 298
           +D + R+E+ A  I  Q K M+ F +ER+ L++   DR  EL R+ +EE+V+LEK+FD E
Sbjct: 562 EDHRVRAERVAKFIKLQDKEMEEFVEERENLMRSHEDRIAELRRKYWEEEVELEKKFDLE 621

Query: 297 LARMMEKYS 271
           LA++MEKYS
Sbjct: 622 LAKLMEKYS 630


>dbj|BAM78523.1| SUPPRESSOR OF GENE SILENCING 3 [Nicotiana tabacum]
          Length = 635

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/69 (46%), Positives = 47/69 (68%)
 Frame = -1

Query: 477 KDRQFRSEQGATLILSQQKAMDNFADERDKLVKDLVDRKTELIRQRYEEDVKLEKEFDEE 298
           +D + R+E+ A  I  Q K M+ F +ER+ L++   DR   L R+ +EE+V+LEK FD E
Sbjct: 562 EDHRVRAERVAKFIKLQDKEMEEFVEERENLMRSHEDRIAALRRKYWEEEVELEKNFDFE 621

Query: 297 LARMMEKYS 271
           LA++MEKYS
Sbjct: 622 LAKLMEKYS 630


>ref|NP_001234711.1| protein SUPPRESSOR OF GENE SILENCING 3 [Solanum lycopersicum]
           gi|189046708|sp|A5YVF1.1|SGS3_SOLLC RecName:
           Full=Protein SUPPRESSOR OF GENE SILENCING 3; AltName:
           Full=SlSGS3 gi|148613844|gb|ABQ96272.1| SGS3-like
           protein [Solanum lycopersicum]
           gi|397529817|gb|AFO53519.1| suppressor of gene silencing
           3 protein [Solanum lycopersicum]
          Length = 633

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/69 (43%), Positives = 48/69 (69%)
 Frame = -1

Query: 477 KDRQFRSEQGATLILSQQKAMDNFADERDKLVKDLVDRKTELIRQRYEEDVKLEKEFDEE 298
           +D + R+E+ A  I  Q K M+ F +ER+ L++   DR   L R+ +EE+V+LE++FD E
Sbjct: 552 EDHRVRAEKVAKFIKLQDKEMEEFVEERENLMRTHDDRIAALRRKYWEEEVELERKFDLE 611

Query: 297 LARMMEKYS 271
           L+++MEKYS
Sbjct: 612 LSKLMEKYS 620


>emb|CBI27700.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/67 (41%), Positives = 47/67 (70%)
 Frame = -1

Query: 471 RQFRSEQGATLILSQQKAMDNFADERDKLVKDLVDRKTELIRQRYEEDVKLEKEFDEELA 292
           R+ R E+ A  I  Q K M+NF  ER++L++   ++   + ++ +EE+V LEKEFD+EL+
Sbjct: 399 RRSRVEEVAKFIKFQDKEMENFVAEREELIRAHEEKVVAMKQRHWEEEVGLEKEFDDELS 458

Query: 291 RMMEKYS 271
           ++MEKY+
Sbjct: 459 KLMEKYT 465


>ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like [Vitis
           vinifera]
          Length = 718

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/67 (41%), Positives = 47/67 (70%)
 Frame = -1

Query: 471 RQFRSEQGATLILSQQKAMDNFADERDKLVKDLVDRKTELIRQRYEEDVKLEKEFDEELA 292
           R+ R E+ A  I  Q K M+NF  ER++L++   ++   + ++ +EE+V LEKEFD+EL+
Sbjct: 648 RRSRVEEVAKFIKFQDKEMENFVAEREELIRAHEEKVVAMKQRHWEEEVGLEKEFDDELS 707

Query: 291 RMMEKYS 271
           ++MEKY+
Sbjct: 708 KLMEKYT 714


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