BLASTX nr result

ID: Cnidium21_contig00005944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005944
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170243.1| PREDICTED: mechanosensitive ion channel prot...   387   e-105
ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel prot...   387   e-105
ref|XP_002278453.1| PREDICTED: uncharacterized mscS family prote...   374   e-101
emb|CAN67321.1| hypothetical protein VITISV_039348 [Vitis vinifera]   369   e-100
ref|NP_177982.1| mechanosensitive channel of small conductance-l...   366   5e-99

>ref|XP_004170243.1| PREDICTED: mechanosensitive ion channel protein 8-like [Cucumis
            sativus]
          Length = 923

 Score =  387 bits (995), Expect = e-105
 Identities = 208/356 (58%), Positives = 248/356 (69%), Gaps = 19/356 (5%)
 Frame = -3

Query: 1011 WRWGXXXXXXXXXXLVAGWGIRVVVFFIELNCMLRKRVLYFVYGLRSAVKNCLWLGLILI 832
            W+W           LV+GWGIRV+VFFIE N +LRKRVLYFVYG+R AV+NCLWLGL+LI
Sbjct: 343  WKWEVMILVLICGRLVSGWGIRVIVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGLVLI 402

Query: 831  ASRFVLVDRVENLVHGKVLSYVTKAWVCLLVGTLIWFVKTLLVKVLASSFHVSTFFDRIQ 652
            A  F+  D+V+  V    L YVTK  VCLLV TL+W VKTL+VKVLASSFHVST+FDRIQ
Sbjct: 403  AWNFLFDDKVQREVKSNALEYVTKVLVCLLVSTLVWLVKTLMVKVLASSFHVSTYFDRIQ 462

Query: 651  DALFNQYVIETLSGPPLDGIHVEPVEEEQIKAEVHQLHNAG-----KLKRIT-------- 511
            DALFNQYVIETLSGPPL  I     EEE++  EV +L NAG      LK           
Sbjct: 463  DALFNQYVIETLSGPPLIEIQKNEEEEERLAEEVIKLQNAGATIPPDLKATAFSTAQKGG 522

Query: 510  ------XXXXXXXXXXXXXXSTVATKKENEGITIAHLHRLNQKNISAWNMKKLMNIVRKG 349
                                 T++ K  +EGITI HLH+L+ KN+SAWNMK+LMNIVR G
Sbjct: 523  RVIGSGGLQKSPRGRSGKLSRTLSKKGGDEGITIDHLHKLSPKNVSAWNMKRLMNIVRHG 582

Query: 348  TLSTLDEQMGDSICEHEGAVQITSEFQAKLAAKKIFCNVAKPGSKHIFQDDLMQFMRGDE 169
            TLSTLDEQ+ D+  E E   +I SE++AK+AAKKIF NVA+ GSK+I+ +DLM+FM  DE
Sbjct: 583  TLSTLDEQIKDTAHEDESTTEIKSEYEAKVAAKKIFLNVARNGSKYIYLEDLMRFMEKDE 642

Query: 168  ALKTMSLFEGASGWKGISRKELKNWMVNTFRERRALVLSLNDTKKAVNKLHQMLNI 1
            A KTM LFEGA   + IS+  LKNW+VN FRERRAL L+LNDTK AVNKLH+M+NI
Sbjct: 643  ASKTMGLFEGACESRKISKSSLKNWVVNAFRERRALALTLNDTKTAVNKLHRMVNI 698


>ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel protein 8-like [Cucumis
            sativus]
          Length = 923

 Score =  387 bits (995), Expect = e-105
 Identities = 208/356 (58%), Positives = 248/356 (69%), Gaps = 19/356 (5%)
 Frame = -3

Query: 1011 WRWGXXXXXXXXXXLVAGWGIRVVVFFIELNCMLRKRVLYFVYGLRSAVKNCLWLGLILI 832
            W+W           LV+GWGIRV+VFFIE N +LRKRVLYFVYG+R AV+NCLWLGL+LI
Sbjct: 343  WKWEVMILVLICGRLVSGWGIRVIVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGLVLI 402

Query: 831  ASRFVLVDRVENLVHGKVLSYVTKAWVCLLVGTLIWFVKTLLVKVLASSFHVSTFFDRIQ 652
            A  F+  D+V+  V    L YVTK  VCLLV TL+W VKTL+VKVLASSFHVST+FDRIQ
Sbjct: 403  AWNFLFDDKVQREVKSNALEYVTKVLVCLLVSTLVWLVKTLMVKVLASSFHVSTYFDRIQ 462

Query: 651  DALFNQYVIETLSGPPLDGIHVEPVEEEQIKAEVHQLHNAG-----KLKRIT-------- 511
            DALFNQYVIETLSGPPL  I     EEE++  EV +L NAG      LK           
Sbjct: 463  DALFNQYVIETLSGPPLIEIQKNEEEEERLAEEVIKLQNAGATIPPDLKATAFSTAQKGG 522

Query: 510  ------XXXXXXXXXXXXXXSTVATKKENEGITIAHLHRLNQKNISAWNMKKLMNIVRKG 349
                                 T++ K  +EGITI HLH+L+ KN+SAWNMK+LMNIVR G
Sbjct: 523  RVIGSGGLQKSPRGRSGKLSRTLSKKGGDEGITIDHLHKLSPKNVSAWNMKRLMNIVRHG 582

Query: 348  TLSTLDEQMGDSICEHEGAVQITSEFQAKLAAKKIFCNVAKPGSKHIFQDDLMQFMRGDE 169
            TLSTLDEQ+ D+  E E   +I SE++AK+AAKKIF NVA+ GSK+I+ +DLM+FM  DE
Sbjct: 583  TLSTLDEQIKDTAHEDESTTEIKSEYEAKVAAKKIFLNVARNGSKYIYLEDLMRFMEKDE 642

Query: 168  ALKTMSLFEGASGWKGISRKELKNWMVNTFRERRALVLSLNDTKKAVNKLHQMLNI 1
            A KTM LFEGA   + IS+  LKNW+VN FRERRAL L+LNDTK AVNKLH+M+NI
Sbjct: 643  ASKTMGLFEGACESRKISKSSLKNWVVNAFRERRALALTLNDTKTAVNKLHRMVNI 698


>ref|XP_002278453.1| PREDICTED: uncharacterized mscS family protein At1g78610-like [Vitis
            vinifera]
          Length = 897

 Score =  374 bits (959), Expect = e-101
 Identities = 202/341 (59%), Positives = 240/341 (70%), Gaps = 4/341 (1%)
 Frame = -3

Query: 1011 WRWGXXXXXXXXXXLVAGWGIRVVVFFIELNCMLRKRVLYFVYGLRSAVKNCLWLGLILI 832
            WRW           LV+GWGIR+VVFFIE N +LRKRVLYFVYGLR AV+NCLWLGL+LI
Sbjct: 322  WRWEVMVLVLICGRLVSGWGIRLVVFFIERNFLLRKRVLYFVYGLRKAVQNCLWLGLVLI 381

Query: 831  ASRFVLVDRVENLVHGKVLSYVTKAWVCLLVGTLIWFVKTLLVKVLASSFHVSTFFDRIQ 652
            A   +   +VE       L YVTK  VCLLVG L+W +KTL+VKVLASSFHVSTFFDRIQ
Sbjct: 382  AWHIMFDKKVERETKNDSLKYVTKILVCLLVGVLLWLLKTLMVKVLASSFHVSTFFDRIQ 441

Query: 651  DALFNQYVIETLSGPPLDGIHVEPVEEEQIKAEVHQLHNAGKLK----RITXXXXXXXXX 484
            +ALFNQYVIETLSG P   I     EE+ + AEV +L NAG       R           
Sbjct: 442  EALFNQYVIETLSGRPSLEIQHHKDEEQSVLAEVTKLQNAGITVPPELRAAALRPSSGRV 501

Query: 483  XXXXXSTVATKKENEGITIAHLHRLNQKNISAWNMKKLMNIVRKGTLSTLDEQMGDSICE 304
                     +  +NEGITI  LH+LN +N+SAWNMK+LM++VR G+L+TLDEQ+ DS  +
Sbjct: 502  IGSGGLQKGSVGKNEGITIDDLHKLNHENVSAWNMKRLMHMVRHGSLATLDEQIHDSTHK 561

Query: 303  HEGAVQITSEFQAKLAAKKIFCNVAKPGSKHIFQDDLMQFMRGDEALKTMSLFEGASGWK 124
             E A QI SE +AK+AA+KIF NVAKP  K+I  +D+M+FMR DEALKTMSLFEGAS   
Sbjct: 562  DESATQIKSEHEAKIAARKIFHNVAKPNCKYIDLEDIMRFMREDEALKTMSLFEGASQSG 621

Query: 123  GISRKELKNWMVNTFRERRALVLSLNDTKKAVNKLHQMLNI 1
             IS+  LKNW+VN FRERRAL L+LNDTK AVNKLHQM+N+
Sbjct: 622  KISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHQMVNV 662


>emb|CAN67321.1| hypothetical protein VITISV_039348 [Vitis vinifera]
          Length = 922

 Score =  369 bits (948), Expect = e-100
 Identities = 202/351 (57%), Positives = 243/351 (69%), Gaps = 16/351 (4%)
 Frame = -3

Query: 1011 WRWGXXXXXXXXXXLVAGWGIRVVVFFIELNCMLRKRVLYFVYGLRSAVKNCLWLGLILI 832
            WRW           LV+GWGIR+VVFFIE N +LRKRVLYFVYGLR AV+NCLWLGL+LI
Sbjct: 352  WRWEVMVLVLICGRLVSGWGIRLVVFFIERNFLLRKRVLYFVYGLRKAVQNCLWLGLVLI 411

Query: 831  ASRFVLVDRVENLVHGKVLSYVTKAWVCLLVGTLIWFVKTLLVKVLASSFHVSTFFDRIQ 652
            A   +   +VE       L YVTK  VCLLVG L+W +KTL+VKVLASSFHVSTFFDRIQ
Sbjct: 412  AWHIMFDKKVERETKNDSLKYVTKILVCLLVGVLLWLLKTLMVKVLASSFHVSTFFDRIQ 471

Query: 651  DALFNQYVIETLSGPPLDGIHVEPVEEEQIKAEVHQLHNAG-------KLKRITXXXXXX 493
            +ALFNQYVIETLSG P   I     EE+ + AEV +L NAG       +   +       
Sbjct: 472  EALFNQYVIETLSGRPSLEIQHHKDEEQSVLAEVTKLQNAGITVPPELRAAALRPSSGRV 531

Query: 492  XXXXXXXXSTVA---------TKKENEGITIAHLHRLNQKNISAWNMKKLMNIVRKGTLS 340
                     +V          +KK++EGITI  LH+LN +N+SAWNMK+LM++VR G+L+
Sbjct: 532  IGSGGLQKGSVGKSLRLSRTISKKQDEGITIDDLHKLNHENVSAWNMKRLMHMVRHGSLA 591

Query: 339  TLDEQMGDSICEHEGAVQITSEFQAKLAAKKIFCNVAKPGSKHIFQDDLMQFMRGDEALK 160
            TLDEQ+ DS  + E A QI SE +AK+AA+KIF NVAKP  K+I  +D+M+FMR DEALK
Sbjct: 592  TLDEQIHDSTHKDESATQIKSEHEAKIAARKIFHNVAKPNCKYIDLEDIMRFMREDEALK 651

Query: 159  TMSLFEGASGWKGISRKELKNWMVNTFRERRALVLSLNDTKKAVNKLHQML 7
            TMSLFEGAS    IS+  LKNW+VN FRERRAL L+LNDTK AVNKLHQM+
Sbjct: 652  TMSLFEGASQSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHQMM 702


>ref|NP_177982.1| mechanosensitive channel of small conductance-like 6 [Arabidopsis
            thaliana] gi|75213461|sp|Q9SYM1.1|MSL6_ARATH RecName:
            Full=Mechanosensitive ion channel protein 6; AltName:
            Full=Mechanosensitive channel of small conductance-like
            6; AltName: Full=MscS-Like protein 6
            gi|4836872|gb|AAD30575.1|AC007260_6 Hypothetical protein
            [Arabidopsis thaliana] gi|332198006|gb|AEE36127.1|
            mechanosensitive channel of small conductance-like 6
            [Arabidopsis thaliana]
          Length = 856

 Score =  366 bits (939), Expect = 5e-99
 Identities = 191/343 (55%), Positives = 241/343 (70%), Gaps = 6/343 (1%)
 Frame = -3

Query: 1011 WRWGXXXXXXXXXXLVAGWGIRVVVFFIELNCMLRKRVLYFVYGLRSAVKNCLWLGLILI 832
            W+W           LV+ W +++VVFFIE N +LRKRVLYFVYG+R AV+NCLWLGL+L+
Sbjct: 276  WKWESMVLVLICGRLVSSWIVKIVVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGLVLL 335

Query: 831  ASRFVLVDRVENLVHGKVLSYVTKAWVCLLVGTLIWFVKTLLVKVLASSFHVSTFFDRIQ 652
            A  F+  ++V    + K L  VTK +VCLLVG L+W VKTLLVKVLASSFH+ST+FDRIQ
Sbjct: 336  AWHFLFDEKVAKAANTKALRVVTKIFVCLLVGFLLWLVKTLLVKVLASSFHMSTYFDRIQ 395

Query: 651  DALFNQYVIETLSGPPLDGIHVEPVEEEQIKAEVHQLHNAGKLKRITXXXXXXXXXXXXX 472
            ++LF QYVIETLSGPPL  I     EEE+I  EV +  N G ++  +             
Sbjct: 396  ESLFTQYVIETLSGPPLIEIQKNEEEEERISVEVKKFQNPGGVEIQSGAQKSPMKTGKSP 455

Query: 471  XSTVATKK------ENEGITIAHLHRLNQKNISAWNMKKLMNIVRKGTLSTLDEQMGDSI 310
              +           EN+GITI  LH+LN KN+SAW MK+LMNI+R G+L+TLDEQ+ D  
Sbjct: 456  FLSHVLSNGGGGGGENKGITIDSLHKLNPKNVSAWKMKRLMNIIRNGSLTTLDEQLQDPS 515

Query: 309  CEHEGAVQITSEFQAKLAAKKIFCNVAKPGSKHIFQDDLMQFMRGDEALKTMSLFEGASG 130
             + +   QI SEF+AKLAA+KIF NVAKPGSK I+ +D+M+F+  DEALKT+SLFEGAS 
Sbjct: 516  LDDDKGNQIRSEFEAKLAARKIFHNVAKPGSKFIYANDIMRFLPDDEALKTLSLFEGASE 575

Query: 129  WKGISRKELKNWMVNTFRERRALVLSLNDTKKAVNKLHQMLNI 1
               IS+  LKNW+VN FRERRAL L+LNDTK AVN+LH+M+NI
Sbjct: 576  TNRISKSSLKNWVVNAFRERRALALTLNDTKTAVNRLHKMVNI 618


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