BLASTX nr result

ID: Cnidium21_contig00005885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005885
         (2559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542106.1| PREDICTED: coatomer subunit beta'-2-like [Gl...    70   2e-09
ref|XP_002304182.1| predicted protein [Populus trichocarpa] gi|1...    69   8e-09
gb|AFW75500.1| hypothetical protein ZEAMMB73_206786 [Zea mays]         68   1e-08
gb|AFW75499.1| hypothetical protein ZEAMMB73_206786 [Zea mays]         68   1e-08
gb|AFW75498.1| hypothetical protein ZEAMMB73_206786 [Zea mays]         68   1e-08

>ref|XP_003542106.1| PREDICTED: coatomer subunit beta'-2-like [Glycine max]
          Length = 538

 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 36/54 (66%), Positives = 40/54 (74%)
 Frame = +3

Query: 2376 HSHEVLNLNKLNSMSSVVHFLESRGMIEDALEVATDHDYRFELAILLGKLQIAK 2537
            H+H V   +   S   V HFLESRGMIEDALEVATD DYRF+LAI LGKL +AK
Sbjct: 228  HTHNVSASSVFGSEVFVAHFLESRGMIEDALEVATDPDYRFDLAIQLGKLDVAK 281


>ref|XP_002304182.1| predicted protein [Populus trichocarpa] gi|118486249|gb|ABK94966.1|
            unknown [Populus trichocarpa] gi|222841614|gb|EEE79161.1|
            predicted protein [Populus trichocarpa]
          Length = 470

 Score = 68.6 bits (166), Expect = 8e-09
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +3

Query: 2418 SSVVHFLESRGMIEDALEVATDHDYRFELAILLGKLQIAK 2537
            +SV HFLESRGMIEDALEVATD DYRFELAI LG+L++AK
Sbjct: 179  NSVAHFLESRGMIEDALEVATDPDYRFELAIQLGRLEVAK 218


>gb|AFW75500.1| hypothetical protein ZEAMMB73_206786 [Zea mays]
          Length = 900

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 31/54 (57%), Positives = 43/54 (79%)
 Frame = +3

Query: 2376 HSHEVLNLNKLNSMSSVVHFLESRGMIEDALEVATDHDYRFELAILLGKLQIAK 2537
            H++E+L+       +SV HFLESRGM+E+ALE+ATD DY+F+LA+ LGKL +AK
Sbjct: 605  HANEILSSIPKAQYNSVAHFLESRGMLEEALEIATDADYKFDLAVQLGKLDVAK 658


>gb|AFW75499.1| hypothetical protein ZEAMMB73_206786 [Zea mays]
          Length = 864

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 31/54 (57%), Positives = 43/54 (79%)
 Frame = +3

Query: 2376 HSHEVLNLNKLNSMSSVVHFLESRGMIEDALEVATDHDYRFELAILLGKLQIAK 2537
            H++E+L+       +SV HFLESRGM+E+ALE+ATD DY+F+LA+ LGKL +AK
Sbjct: 605  HANEILSSIPKAQYNSVAHFLESRGMLEEALEIATDADYKFDLAVQLGKLDVAK 658


>gb|AFW75498.1| hypothetical protein ZEAMMB73_206786 [Zea mays]
          Length = 855

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 31/54 (57%), Positives = 43/54 (79%)
 Frame = +3

Query: 2376 HSHEVLNLNKLNSMSSVVHFLESRGMIEDALEVATDHDYRFELAILLGKLQIAK 2537
            H++E+L+       +SV HFLESRGM+E+ALE+ATD DY+F+LA+ LGKL +AK
Sbjct: 557  HANEILSSIPKAQYNSVAHFLESRGMLEEALEIATDADYKFDLAVQLGKLDVAK 610


Top