BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005847
         (1405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41814.1| unknown [Lotus japonicus]                              566   e-162
ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...   575   e-161
ref|XP_002298425.1| predicted protein [Populus trichocarpa] gi|2...   572   e-160
gb|ACJ86307.1| unknown [Medicago truncatula]                          561   e-157
ref|XP_004165383.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   558   e-156

>gb|AFK41814.1| unknown [Lotus japonicus]
          Length = 425

 Score =  566 bits (1459), Expect(2) = e-162
 Identities = 274/366 (74%), Positives = 310/366 (84%)
 Frame = +3

Query: 234  VAPMMDWTDNHYRTLARLISKHAWLYTEMVAAETIVHQTENLDRFLAYRPEQHPIVLQIG 413
            VAPMM+WTD+HYRTLARLISKHAWLYTEM+AAETIV+Q +NLDRFLA+ P+QHPIVLQIG
Sbjct: 63   VAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIG 122

Query: 414  GNKLDRLARATELASPYGYDEINLNCGCPSSKVAGHGCFGVSLMLEPKLVAEAMTVIAAN 593
            G+ +++LA+ATELA+ YGYDEINLNCGCPS KVAGHGCFGVSLML+PK VAEAM+ I AN
Sbjct: 123  GSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAITAN 182

Query: 594  CDVPVSVKCRIGVDEHDSYNELCDFISEVSSKSPTKHFIIHSRKALLNGISPADNRKIPP 773
             +VPVSVKCRIGVD+HDSY+ELCDFI +VSS SPTKHFIIHSRKALLNGISPA+NR IPP
Sbjct: 183  TNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPP 242

Query: 774  LKYEFYYALLRDFPDLMFTINGGIKSIDEVNAARREGAHGVMVGRAAYNTPWHSLGLVDT 953
            LKYE++Y LLRDFPDL FTINGGI S+DEV AAR  GA+GV VGRAAYN PWH LG VDT
Sbjct: 243  LKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVTVGRAAYNNPWHILGHVDT 302

Query: 954  AVYGAPHSGLTRRQVLEQYQKYGDSILGKQGNSRPNIRDIVKPTLGLFHSAPGNGLWKRK 1133
             +YGAP   LTRRQVLE+Y  YGDS+LGK G  RP +RDIVKP L LFHSAPGNGLWKRK
Sbjct: 303  VIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGR-RPTVRDIVKPLLNLFHSAPGNGLWKRK 361

Query: 1134 ADVSLRRCTTVKSFFEETLDAIPDWVLDETLEETSSSTVQTFANSKTLLPPPYTTYRDCE 1313
            AD + R CTT+KSFFEETL AIPD VLD  + E +      FAN  +LLPPPYTT    E
Sbjct: 362  ADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRRDLFANMDSLLPPPYTTRE--E 419

Query: 1314 QIVLCA 1331
             +++CA
Sbjct: 420  AVIICA 425



 Score = 35.0 bits (79), Expect(2) = e-162
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = +2

Query: 8   LSVSYTPVYSVILGRRGRFSQNSICRTKSQRLCTYFQKHNQHTLPVQQHLSPLFSVAP 181
           L+VS++PV S ++    RF      R+ S+      Q H++  LP   +L P FSVAP
Sbjct: 9   LAVSFSPVGSTVIRNNCRFHVGRNFRSSSRFFSAKQQSHDKGVLP-NYYLPPWFSVAP 65


>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
            gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
            A, putative [Ricinus communis]
          Length = 375

 Score =  575 bits (1482), Expect = e-161
 Identities = 275/355 (77%), Positives = 305/355 (85%)
 Frame = +3

Query: 234  VAPMMDWTDNHYRTLARLISKHAWLYTEMVAAETIVHQTENLDRFLAYRPEQHPIVLQIG 413
            VAPMMDWTD+HYRTLARLISKH+WLYTEM+AAETIV+Q  NLDRFLA+ P+QHPIVLQIG
Sbjct: 13   VAPMMDWTDHHYRTLARLISKHSWLYTEMLAAETIVYQQGNLDRFLAFSPQQHPIVLQIG 72

Query: 414  GNKLDRLARATELASPYGYDEINLNCGCPSSKVAGHGCFGVSLMLEPKLVAEAMTVIAAN 593
            G+ LD LA+ATELA+ YGYDEIN NCGCPS +VAGHGCFGV LML+PK V EAM+VIAAN
Sbjct: 73   GSNLDNLAKATELATAYGYDEINFNCGCPSPRVAGHGCFGVRLMLDPKFVGEAMSVIAAN 132

Query: 594  CDVPVSVKCRIGVDEHDSYNELCDFISEVSSKSPTKHFIIHSRKALLNGISPADNRKIPP 773
             DVPVSVKCRIGVD HDSYNELCDFI +VSS SPTKHFIIHSRKALLNGISPA+NRKIPP
Sbjct: 133  TDVPVSVKCRIGVDNHDSYNELCDFIYKVSSLSPTKHFIIHSRKALLNGISPAENRKIPP 192

Query: 774  LKYEFYYALLRDFPDLMFTINGGIKSIDEVNAARREGAHGVMVGRAAYNTPWHSLGLVDT 953
            LKYE+Y+ALLRDFPDL FTINGGI  IDEVN A REGAHGVMVGRAA+N PW  LG VD+
Sbjct: 193  LKYEYYFALLRDFPDLRFTINGGINCIDEVNLALREGAHGVMVGRAAFNNPWTVLGHVDS 252

Query: 954  AVYGAPHSGLTRRQVLEQYQKYGDSILGKQGNSRPNIRDIVKPTLGLFHSAPGNGLWKRK 1133
            A+YGAP SGLTRRQVLEQYQ Y D+ILG  GN+RPN+RD+VKP LGLF+S PGNGLWKR+
Sbjct: 253  AIYGAPESGLTRRQVLEQYQAYADAILGTYGNNRPNVRDVVKPLLGLFYSEPGNGLWKRR 312

Query: 1134 ADVSLRRCTTVKSFFEETLDAIPDWVLDETLEETSSSTVQTFANSKTLLPPPYTT 1298
            AD + + CTT+KSFFEETL AIPD VLD  + E  S     F N + LLPPPY T
Sbjct: 313  ADAAFQSCTTIKSFFEETLVAIPDTVLDSPIAEAPSGRQDLFTNVRGLLPPPYAT 367


>ref|XP_002298425.1| predicted protein [Populus trichocarpa] gi|222845683|gb|EEE83230.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  572 bits (1473), Expect = e-160
 Identities = 280/365 (76%), Positives = 310/365 (84%), Gaps = 2/365 (0%)
 Frame = +3

Query: 234  VAPMMDWTDNHYRTLARLISKHAWLYTEMVAAETIVHQTENLDRFLAYRPEQHPIVLQIG 413
            VAPMMDWTDNHYRT+AR+ISKHAWLYTEM+AAETIVHQ  +LDRFLA+ PEQHPIVLQIG
Sbjct: 13   VAPMMDWTDNHYRTVARIISKHAWLYTEMLAAETIVHQQGDLDRFLAFSPEQHPIVLQIG 72

Query: 414  GNKLDRLARATELASPYGYDEINLNCGCPSSKVAGHGCFGVSLMLEPKLVAEAMTVIAAN 593
            GN LD +A+AT LA+ YGYDEINLNCGCPS KVAGHGCFGV LML+PK V EAM+VIAAN
Sbjct: 73   GNNLDNIAKATRLANSYGYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVGEAMSVIAAN 132

Query: 594  CDVPVSVKCRIGVDEHDSYNELCDFISEVSSKSPTKHFIIHSRKALLNGISPADNRKIPP 773
             DVPVSVKCRIG+D+HDSYNELCDFI +VSS SPTKHFIIHSRKALLNGISPADNR+IPP
Sbjct: 133  TDVPVSVKCRIGLDDHDSYNELCDFIYKVSSLSPTKHFIIHSRKALLNGISPADNRRIPP 192

Query: 774  LKYEFYYALLRDFPDLMFTINGGIKSIDEVNAARREGAHGVMVGRAAYNTPWHSLGLVDT 953
            LKYE+YYALLRDFPDL FTINGGI  +DEVNAA REGAHGVMVGRAAYN  W++L  VDT
Sbjct: 193  LKYEYYYALLRDFPDLRFTINGGINCVDEVNAALREGAHGVMVGRAAYNYLWNTLAHVDT 252

Query: 954  AVYGAPHSGLTRRQVLEQYQKYGDSILGKQGNSRPNIRDIVKPTLGLFHSAPGNGLWKRK 1133
            A+YGAP SGLTRRQVLEQYQ YGD++LG  GNSRPNIRD++KP  G F+S PGN LWKRK
Sbjct: 253  AIYGAPSSGLTRRQVLEQYQVYGDAVLGTYGNSRPNIRDLIKPLFGFFYSEPGNNLWKRK 312

Query: 1134 ADVS--LRRCTTVKSFFEETLDAIPDWVLDETLEETSSSTVQTFANSKTLLPPPYTTYRD 1307
            AD +  ++  TTVKSFFEETL AIPD VLD    E  S     FAN + LLPPPY T R+
Sbjct: 313  ADAAFQMKNITTVKSFFEETLVAIPDAVLDSHAAELPSGRKDLFANVRGLLPPPYET-RE 371

Query: 1308 CEQIV 1322
             E +V
Sbjct: 372  QEVVV 376


>gb|ACJ86307.1| unknown [Medicago truncatula]
          Length = 432

 Score =  561 bits (1447), Expect = e-157
 Identities = 274/366 (74%), Positives = 307/366 (83%)
 Frame = +3

Query: 234  VAPMMDWTDNHYRTLARLISKHAWLYTEMVAAETIVHQTENLDRFLAYRPEQHPIVLQIG 413
            VAPMMDWTDNHYRTLARLISKHAWLYTEM+AAETIVHQ +NLDRFLAY PEQHPIVLQIG
Sbjct: 71   VAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIVHQKDNLDRFLAYSPEQHPIVLQIG 130

Query: 414  GNKLDRLARATELASPYGYDEINLNCGCPSSKVAGHGCFGVSLMLEPKLVAEAMTVIAAN 593
            G+ ++ LA+ATELA+ Y YDEINLNCGCPS +VAGHG FGVSLML+PK VAEAM+ IAAN
Sbjct: 131  GSNIESLAKATELANAYCYDEINLNCGCPSPRVAGHGSFGVSLMLDPKFVAEAMSAIAAN 190

Query: 594  CDVPVSVKCRIGVDEHDSYNELCDFISEVSSKSPTKHFIIHSRKALLNGISPADNRKIPP 773
             +VPVSVKCRIGVD+ DSY+ELC+F+S VSS SPTKHFIIHSRKALLNGISPA+NR IPP
Sbjct: 191  TNVPVSVKCRIGVDDRDSYDELCEFVSTVSSLSPTKHFIIHSRKALLNGISPAENRSIPP 250

Query: 774  LKYEFYYALLRDFPDLMFTINGGIKSIDEVNAARREGAHGVMVGRAAYNTPWHSLGLVDT 953
            LKYE++Y LLRDFPDL FTINGGI S+DEVNAAR  GAHGVM+GRAA+  PWH LG VDT
Sbjct: 251  LKYEYFYGLLRDFPDLTFTINGGITSVDEVNAARDAGAHGVMIGRAAFYNPWHILGHVDT 310

Query: 954  AVYGAPHSGLTRRQVLEQYQKYGDSILGKQGNSRPNIRDIVKPTLGLFHSAPGNGLWKRK 1133
            A+YGAP  GLTRRQVLE+Y  YGDS LGK G+ RP +RDIVKP L LFHSAPGNG WKR 
Sbjct: 311  AIYGAPSCGLTRRQVLEKYIVYGDSELGKYGH-RPTVRDIVKPLLNLFHSAPGNGQWKRN 369

Query: 1134 ADVSLRRCTTVKSFFEETLDAIPDWVLDETLEETSSSTVQTFANSKTLLPPPYTTYRDCE 1313
            AD + R CTT+KSFFEET+DAIPD VLD  + E        FAN  +LLPP Y T    E
Sbjct: 370  ADAAFRNCTTIKSFFEETIDAIPDSVLDSPVSEPPLGRTDLFANIDSLLPPRYETR---E 426

Query: 1314 QIVLCA 1331
            ++V+CA
Sbjct: 427  EVVICA 432


>ref|XP_004165383.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Cucumis sativus]
          Length = 431

 Score =  558 bits (1438), Expect = e-156
 Identities = 269/364 (73%), Positives = 308/364 (84%)
 Frame = +3

Query: 234  VAPMMDWTDNHYRTLARLISKHAWLYTEMVAAETIVHQTENLDRFLAYRPEQHPIVLQIG 413
            VAPMM+ TDNHYRTLARLISKHAWLYTEM+AAETIV+Q +NLDRFLA+ P+QHPIVLQIG
Sbjct: 69   VAPMMECTDNHYRTLARLISKHAWLYTEMLAAETIVYQKDNLDRFLAFSPDQHPIVLQIG 128

Query: 414  GNKLDRLARATELASPYGYDEINLNCGCPSSKVAGHGCFGVSLMLEPKLVAEAMTVIAAN 593
            GN LD +A+A ELA+PYGYDEINLNCGCPS KVAGHGCFGV LML+PK V EAM+VIAA 
Sbjct: 129  GNNLDNIAKAIELANPYGYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVGEAMSVIAAK 188

Query: 594  CDVPVSVKCRIGVDEHDSYNELCDFISEVSSKSPTKHFIIHSRKALLNGISPADNRKIPP 773
             D PVSVKCRIGVD+HDSYNELCDFI +VSS SPTKHF+IHSRKALLNGISPA+NR IPP
Sbjct: 189  TDAPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPTKHFVIHSRKALLNGISPAENRTIPP 248

Query: 774  LKYEFYYALLRDFPDLMFTINGGIKSIDEVNAARREGAHGVMVGRAAYNTPWHSLGLVDT 953
            LKYE++YAL+RDFPDL FTINGGI ++DE NAA R GAHGVM+GRAAY  PW +LG VDT
Sbjct: 249  LKYEYFYALMRDFPDLRFTINGGINTVDEANAALRLGAHGVMMGRAAYQNPWRTLGHVDT 308

Query: 954  AVYGAPHSGLTRRQVLEQYQKYGDSILGKQGNSRPNIRDIVKPTLGLFHSAPGNGLWKRK 1133
            A+YGAP SG+TRRQVLEQYQ YGDS+LG+ GN +PNIRD+VKP L LF++ PGNG WKRK
Sbjct: 309  AIYGAPSSGITRRQVLEQYQVYGDSVLGRYGN-KPNIRDVVKPLLHLFYTDPGNGPWKRK 367

Query: 1134 ADVSLRRCTTVKSFFEETLDAIPDWVLDETLEETSSSTVQTFANSKTLLPPPYTTYRDCE 1313
            AD +   C T+KSFFEET+ AIPD+VLD  + E  S     FAN+ +L+PPP   Y D E
Sbjct: 368  ADAAFMHCKTIKSFFEETIVAIPDYVLDAPVAEPPSGREDLFANTLSLMPPP---YEDRE 424

Query: 1314 QIVL 1325
            Q V+
Sbjct: 425  QKVV 428