BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005813
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA53967.1| TPA: importin alpha-1b subunit [Zea mays]              80   5e-13
ref|NP_001031011.1| importin alpha isoform 4 [Arabidopsis thalia...    79   8e-13
ref|NP_172398.1| importin alpha isoform 4 [Arabidopsis thaliana]...    79   8e-13
gb|EKX35427.1| hypothetical protein GUITHDRAFT_79857 [Guillardia...    79   1e-12
ref|XP_002889740.1| hypothetical protein ARALYDRAFT_888168 [Arab...    78   1e-12

>tpg|DAA53967.1| TPA: importin alpha-1b subunit [Zea mays]
          Length = 526

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
 Frame = +1

Query: 1   VEEIVVRKLFWLASHRYPWIAIPALMVVGNIVRYGQDQQIQSMIAKDMLTRLRRLL-DND 177
           +E  V  +L  L  H  P + IPAL  VGNIV  G DQQ Q +I    L RL  LL  N 
Sbjct: 278 IEAGVCPRLVELLLHPSPSVLIPALRTVGNIVT-GDDQQTQCIIDHQALPRLLNLLTQNH 336

Query: 178 SKLVQREACWIISNITATSRIEISS--SNSVLVRLCDFLKDEESDVQMDAAWSIFNIFT- 348
            K +++EACW ISNITA ++ +I +  S  ++  L   L+  E D++ +AAW+I N  + 
Sbjct: 337 KKSIKKEACWTISNITAGNKDQIQAVISAGIIAPLLQLLQGAEFDIKKEAAWAISNATSG 396

Query: 349 HDHTKIKW 372
             H +IK+
Sbjct: 397 GSHEQIKY 404


>ref|NP_001031011.1| importin alpha isoform 4 [Arabidopsis thaliana]
           gi|332190302|gb|AEE28423.1| importin alpha isoform 4
           [Arabidopsis thaliana]
          Length = 456

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
 Frame = +1

Query: 1   VEEIVVRKLFWLASHRYPWIAIPALMVVGNIVRYGQDQQIQSMIAKDMLTRLRRLL-DND 177
           +E  V  +L  L  H+ P + IPAL  VGNIV  G D Q Q +I   +L  L  LL  N 
Sbjct: 206 IEAGVCPRLVELLGHQSPTVLIPALRTVGNIVT-GDDSQTQFIIESGVLPHLYNLLTQNH 264

Query: 178 SKLVQREACWIISNITATSRIEISS--SNSVLVRLCDFLKDEESDVQMDAAWSIFN 339
            K +++EACW ISNITA ++++I +     +++ L   L++ E D++ +AAW+I N
Sbjct: 265 KKSIKKEACWTISNITAGNKLQIEAVVGAGIILPLVHLLQNAEFDIKKEAAWAISN 320


>ref|NP_172398.1| importin alpha isoform 4 [Arabidopsis thaliana]
           gi|30681049|ref|NP_849623.1| importin alpha isoform 4
           [Arabidopsis thaliana] gi|3249096|gb|AAC24079.1| Match
           to mRNA for importin alpha-like protein 4 (impa4)
           gb|Y14616 from A. thaliana. ESTs gb|N96440, gb|N37503,
           gb|N37498 and gb|T42198 come from this gene [Arabidopsis
           thaliana] gi|20259334|gb|AAM13992.1| putative importin
           alpha protein [Arabidopsis thaliana]
           gi|21436201|gb|AAM51388.1| putative importin alpha
           protein [Arabidopsis thaliana]
           gi|222422859|dbj|BAH19416.1| AT1G09270 [Arabidopsis
           thaliana] gi|332190300|gb|AEE28421.1| importin alpha
           isoform 4 [Arabidopsis thaliana]
           gi|332190301|gb|AEE28422.1| importin alpha isoform 4
           [Arabidopsis thaliana]
          Length = 538

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
 Frame = +1

Query: 1   VEEIVVRKLFWLASHRYPWIAIPALMVVGNIVRYGQDQQIQSMIAKDMLTRLRRLL-DND 177
           +E  V  +L  L  H+ P + IPAL  VGNIV  G D Q Q +I   +L  L  LL  N 
Sbjct: 288 IEAGVCPRLVELLGHQSPTVLIPALRTVGNIVT-GDDSQTQFIIESGVLPHLYNLLTQNH 346

Query: 178 SKLVQREACWIISNITATSRIEISS--SNSVLVRLCDFLKDEESDVQMDAAWSIFN 339
            K +++EACW ISNITA ++++I +     +++ L   L++ E D++ +AAW+I N
Sbjct: 347 KKSIKKEACWTISNITAGNKLQIEAVVGAGIILPLVHLLQNAEFDIKKEAAWAISN 402


>gb|EKX35427.1| hypothetical protein GUITHDRAFT_79857 [Guillardia theta CCMP2712]
          Length = 498

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   VEEIVVRKLFWLASHRYPWIAIPALMVVGNIVRYGQDQQIQSMIAKDMLTRLRRLLDNDS 180
           +E  V R+L  L  H  P +  PAL  VGNIV  G D Q Q +I   +L  L+ LL ND 
Sbjct: 274 IEAGVCRRLVELLMHHSPQVKTPALRTVGNIVT-GDDNQTQLVINCSVLPCLKALLTNDR 332

Query: 181 KLVQREACWIISNITATSRIEISS--SNSVLVRLCDFLKDEESDVQMDAAWSIFN 339
           K +++E CW ISNITA S+ ++ +   + ++  L   L +EE D++ +  W+I N
Sbjct: 333 KGIRKETCWTISNITAGSKEQLQAVIDHDIIPILIHMLDNEEFDIRKECTWAISN 387


>ref|XP_002889740.1| hypothetical protein ARALYDRAFT_888168 [Arabidopsis lyrata subsp.
           lyrata] gi|297335582|gb|EFH65999.1| hypothetical protein
           ARALYDRAFT_888168 [Arabidopsis lyrata subsp. lyrata]
          Length = 538

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
 Frame = +1

Query: 13  VVRKLFWLASHRYPWIAIPALMVVGNIVRYGQDQQIQSMIAKDMLTRLRRLL-DNDSKLV 189
           V  +L  L  H+ P + IPAL  VGNIV  G D Q Q +I   +L  L  LL  N  K +
Sbjct: 291 VCPRLVELLGHQSPTVLIPALRTVGNIVT-GDDSQTQFIIDSGVLPHLYNLLTQNHKKSI 349

Query: 190 QREACWIISNITATSRIEISS--SNSVLVRLCDFLKDEESDVQMDAAWSIFN 339
           ++EACW ISNITA ++++I +  +  +++ L   L++ E D++ +AAW+I N
Sbjct: 350 KKEACWTISNITAGNKVQIEAVVAAGIILPLVHLLQNAEFDIKKEAAWAISN 401