BLASTX nr result

ID: Cnidium21_contig00005812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005812
         (1645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL99157.1| importin subunit alpha-1, partial [Silene latifolia]    86   3e-14
gb|AEL99158.1| importin subunit alpha-1, partial [Silene latifolia]    86   4e-14
gb|ACU56981.1| importin alpha [Citrus sinensis]                        86   4e-14
ref|XP_002515324.1| importin alpha, putative [Ricinus communis] ...    84   8e-14
ref|XP_003521670.1| PREDICTED: importin subunit alpha-1-like [Gl...    83   2e-13

>gb|AEL99157.1| importin subunit alpha-1, partial [Silene latifolia]
          Length = 316

 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 52/112 (46%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = +2

Query: 899  HREYYIVISALRTIGNYVRWGDDEDIQFMIKQALLPRLAKLLCHEY-TIVRKEACWIISN 1075
            H    ++I ALRT+GN V  GDD   QF+I    LP L  LL H +   ++KEACW ISN
Sbjct: 88   HPSPSVLIPALRTVGNIVT-GDDVQTQFIINSGSLPCLLNLLTHNHKKSIKKEACWTISN 146

Query: 1076 IVVVANNLRIQEVIELDWIDTLVRLVRTDEFEVKEVAERAISNVVSGSDKKQ 1231
            I    N  +IQ VIE D I  LV L++T EF++K+ A   ISN  SG    Q
Sbjct: 147  I-TAGNREQIQAVIEADLIGPLVNLLQTAEFDIKKEAAWTISNATSGGSPDQ 197


>gb|AEL99158.1| importin subunit alpha-1, partial [Silene latifolia]
          Length = 316

 Score = 85.5 bits (210), Expect = 4e-14
 Identities = 51/112 (45%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = +2

Query: 899  HREYYIVISALRTIGNYVRWGDDEDIQFMIKQALLPRLAKLLCHEY-TIVRKEACWIISN 1075
            H    ++I ALRT+GN V  GDD   QF+I    LP L  LL H +   ++KEACW ISN
Sbjct: 88   HPSPSVLIPALRTVGNIVT-GDDVQTQFIINSGSLPCLLNLLTHNHKKSIKKEACWTISN 146

Query: 1076 IVVVANNLRIQEVIELDWIDTLVRLVRTDEFEVKEVAERAISNVVSGSDKKQ 1231
            I    N  +IQ VIE D I  L+ L++T EF++K+ A   ISN  SG    Q
Sbjct: 147  I-TAGNREQIQAVIEADLIGPLINLLQTAEFDIKKEAAWTISNATSGGSPDQ 197


>gb|ACU56981.1| importin alpha [Citrus sinensis]
          Length = 535

 Score = 85.5 bits (210), Expect = 4e-14
 Identities = 52/112 (46%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
 Frame = +2

Query: 899  HREYYIVISALRTIGNYVRWGDDEDIQFMIKQALLPRLAKLLCHEY-TIVRKEACWIISN 1075
            H    ++I ALRT+GN V  GDD   QF+I   +LP L +LL H +   ++KEACW ISN
Sbjct: 297  HPSATVLIPALRTVGNIVT-GDDAQTQFVIDNGVLPCLYQLLTHNHKKSIKKEACWTISN 355

Query: 1076 IVVVANNLRIQEVIELDWIDTLVRLVRTDEFEVKEVAERAISNVVSGSDKKQ 1231
            I    N  +IQ VIE + I  LV L++  EFE+K+ A  AISN  SG   +Q
Sbjct: 356  I-TAGNRAQIQAVIEANIILPLVHLLQHAEFEIKKEAAWAISNATSGGSHQQ 406


>ref|XP_002515324.1| importin alpha, putative [Ricinus communis]
            gi|223545804|gb|EEF47308.1| importin alpha, putative
            [Ricinus communis]
          Length = 454

 Score = 84.3 bits (207), Expect = 8e-14
 Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
 Frame = +2

Query: 899  HREYYIVISALRTIGNYVRWGDDEDIQFMIKQALLPRLAKLLCHEY-TIVRKEACWIISN 1075
            H    ++I ALRT+GN V  GDD   Q MI    LP L  LL H Y   ++KEACW ISN
Sbjct: 219  HPSPTVLIPALRTVGNIVT-GDDMQTQCMINHQALPCLLNLLTHNYKKSIKKEACWTISN 277

Query: 1076 IVVVANNLRIQEVIELDWIDTLVRLVRTDEFEVKEVAERAISNVVSGSDKKQ 1231
            I    N  +IQ +I+ D I  L++L++  EFE+K+ A  AISN  SG   +Q
Sbjct: 278  I-TAGNVNQIQAIIDADLIGPLIQLLQIAEFEIKKEAAWAISNATSGGTHEQ 328


>ref|XP_003521670.1| PREDICTED: importin subunit alpha-1-like [Glycine max]
          Length = 532

 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
 Frame = +2

Query: 899  HREYYIVISALRTIGNYVRWGDDEDIQFMIKQALLPRLAKLLCHEYT-IVRKEACWIISN 1075
            H    ++I ALRT+GN V  GDD   Q +I    LPRL  +L + Y   ++KEACW ISN
Sbjct: 297  HPSPSVLIPALRTVGNIVT-GDDLQTQVIINHQALPRLLNILTNNYKKSIKKEACWTISN 355

Query: 1076 IVVVANNLRIQEVIELDWIDTLVRLVRTDEFEVKEVAERAISNVVSGSDKKQ 1231
            I    N  +IQ+VIE   I  LV L++  EF++K+ A  AISN  SG   +Q
Sbjct: 356  ITA-GNKKQIQDVIEASIIAPLVHLLQNAEFDIKKEAAWAISNATSGGSHEQ 406


Top