BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005770
         (1160 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF52855.1| repressor of silencing 1 [Nicotiana tabacum]           89   2e-25
emb|CBI30244.3| unnamed protein product [Vitis vinifera]               77   1e-11
dbj|BAF52857.1| repressor of silencing 2b [Nicotiana tabacum]          58   3e-11
dbj|BAF52856.1| repressor of silencing 2a [Nicotiana tabacum]          58   3e-11
dbj|BAF52858.1| repressor of silencing 3 [Nicotiana tabacum]           55   1e-09

>dbj|BAF52855.1| repressor of silencing 1 [Nicotiana tabacum]
          Length = 1796

 Score = 89.0 bits (219), Expect(2) = 2e-25
 Identities = 66/198 (33%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
 Frame = +2

Query: 377  ILLQPSNSPNESNCSTSAPVSKEEHARRMKRGHP--SAAVDLYSNNIIGADHNSVQAYLA 550
            IL     SPN SNCS+SA + +E   R +KR H   +   +LYS N++GA  NS+QAY A
Sbjct: 454  ILEMTPKSPNGSNCSSSACLIQETPERALKRRHSFRTNEAELYSTNVMGAYFNSMQAYQA 513

Query: 551  MFXXXXXXXXXXXXMHFPAIYKKKRTDKCQNLIDKTTEYSPKANWGHAFTLERNYMSFAA 730
            +             MHFP IYKKKRT+K          +    ++   FT E NY+S  +
Sbjct: 514  ILPANEPYAHSTQGMHFPTIYKKKRTEK---------GHPTATSYAKPFTCETNYLSL-S 563

Query: 731  QCTKPLS--FITMLDTGNKE---------------TRKKRSEASTRVPDIASLIEIAESI 859
            QC   LS    +  D  N                  R+KRS+  ++V D+ASL+EI +  
Sbjct: 564  QCNIGLSQASTSANDKANNRMWSPERVPAFVEAEGLRRKRSKGISKVRDLASLLEICKHF 623

Query: 860  QSTRLSIKQVGTSHQPYS 913
             +T      +    + YS
Sbjct: 624  PTTPAKEASISEFGERYS 641



 Score = 53.9 bits (128), Expect(2) = 2e-25
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
 Frame = +1

Query: 46  NPARISLTNPVETNPGRPQRSCRRSLNFDILQXXXXXXXXXHASGFQSQISYAKIQSAMQ 225
           NPA     +P   N  RP+RSCRR LNFD              S         + +S++ 
Sbjct: 356 NPAEDETIDP--PNISRPRRSCRRPLNFDSESRLSDESSSHWPSSTVEDFHENQSRSSVH 413

Query: 226 LGQGPEGSAVK--GQSDQIADVQSWSTRGKCRIVFSDVTHDNESNVVQM 366
           LG+  E +  K  G    IA      +RGKC+I+FSD THD ++++++M
Sbjct: 414 LGKDIEVTTGKTEGTVYNIA-----CSRGKCKIIFSDETHDKQASILEM 457


>emb|CBI30244.3| unnamed protein product [Vitis vinifera]
          Length = 1470

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 64/168 (38%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
 Frame = +2

Query: 392 SNSPNESNCSTSAPVSKEEHARRMKRGHPSAA--VDLYSNNIIGADHNSVQAYLAMFXXX 565
           S SPN +NCSTSA + + EH R  KR H       D  + ++ G  +NSVQAY A F   
Sbjct: 301 SMSPNNTNCSTSASLKEREHRRGTKRVHSHIVDKADPRTMSMNGNQYNSVQAYHAKF--Q 358

Query: 566 XXXXXXXXXMHFPAIYKKKRTDKCQNLIDKTTEYSPKANWGHAFTLERNYMSFAAQC--- 736
                    MHFP IYKKKRT+K   L    T  SP           +N +  A  C   
Sbjct: 359 ANEQNRNPGMHFPEIYKKKRTEK--GLNSTATNLSP-------VMAAKNIVMLATACPQN 409

Query: 737 ---------TKPLSFITMLDTGNKE-TRKKRSEASTRVPDIASLIEIA 850
                     K  +F  ML  G +E   KKRS+  TRV D+ASL  IA
Sbjct: 410 HAIPKNGGQDKVQTFDCMLALGPRERLTKKRSKGLTRVRDLASLNGIA 457


>dbj|BAF52857.1| repressor of silencing 2b [Nicotiana tabacum]
          Length = 1673

 Score = 58.2 bits (139), Expect(2) = 3e-11
 Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
 Frame = +2

Query: 377  ILLQPSNSPNESNCSTSAPVSKEEHARRMKRGHP--SAAVDLYSNNIIGADHNSVQAYLA 550
            I+     SPN SNCS+S  +    H + +KR H   +     YS N  G   NS+QAY A
Sbjct: 523  IVQMTPQSPNCSNCSSSTCLP---HGKGLKRQHSYRTDEAQFYSLNARGVYFNSMQAYQA 579

Query: 551  MFXXXXXXXXXXXXMHFPAIYKKKRTDKCQNLIDKTTEYSPKANWGHAFTLERNYMSFAA 730
            +             MH PAIYKKKRT++          +S  A +   FT + N +  ++
Sbjct: 580  ILPANEPEVYSNLGMHCPAIYKKKRTEE---------GHSSAAFYIKHFTSKINCVP-SS 629

Query: 731  QCT------------------KPLSFITMLDTGNKETRKKRSEASTRVPDIASLIEIAES 856
            QC                   +   F+  +    K  RK+RS+ +T+V ++AS+ EI + 
Sbjct: 630  QCNISGSPSNNSSTNIAYNRLQNSDFVPAVVEAEK-LRKRRSKGATQVHELASVHEIYKQ 688

Query: 857  IQST 868
             Q++
Sbjct: 689  FQTS 692



 Score = 37.4 bits (85), Expect(2) = 3e-11
 Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 44/134 (32%)
 Frame = +1

Query: 97  PQRSCRRSLNFDILQXXXXXXXXXHASGF-----QSQISYAKIQSAMQLGQGPEGSAVK- 258
           P++SCRR+LNF+  +          +S       Q++ +   +QSA QLGQG E    K 
Sbjct: 394 PRKSCRRTLNFEFERQASDENSSYRSSTLDLHANQTESTAQCVQSA-QLGQGVEAPNEKT 452

Query: 259 --------------------------------------GQSDQIADVQSWSTRGKCRIVF 324
                                                      I   Q+ STRG  RI F
Sbjct: 453 AVGTTYNINCSLNQELRNYLSQHEVQYLGSPSLDKVGWNHDKVIVGNQNESTRGNYRINF 512

Query: 325 SDVTHDNESNVVQM 366
           SD+T D ++++VQM
Sbjct: 513 SDLTRDKQASIVQM 526


>dbj|BAF52856.1| repressor of silencing 2a [Nicotiana tabacum]
          Length = 1673

 Score = 58.2 bits (139), Expect(2) = 3e-11
 Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
 Frame = +2

Query: 377  ILLQPSNSPNESNCSTSAPVSKEEHARRMKRGHP--SAAVDLYSNNIIGADHNSVQAYLA 550
            I+     SPN SNCS+S  +    H + +KR H   +     YS N  G   NS+QAY A
Sbjct: 523  IVQMTPQSPNCSNCSSSTCLP---HGKGLKRQHSYRTDEAQFYSLNARGVYFNSMQAYQA 579

Query: 551  MFXXXXXXXXXXXXMHFPAIYKKKRTDKCQNLIDKTTEYSPKANWGHAFTLERNYMSFAA 730
            +             MH PAIYKKKRT++          +S  A +   FT + N +  ++
Sbjct: 580  ILPANEPEVYSNLGMHCPAIYKKKRTEE---------GHSSAAFYIKHFTSKINCVP-SS 629

Query: 731  QCT------------------KPLSFITMLDTGNKETRKKRSEASTRVPDIASLIEIAES 856
            QC                   +   F+  +    K  RK+RS+ +T+V ++AS+ EI + 
Sbjct: 630  QCNISGSPSNNSSTNIAYNRLQNSDFVPAVVEAEK-LRKRRSKGATQVHELASVHEIYKQ 688

Query: 857  IQST 868
             Q++
Sbjct: 689  FQTS 692



 Score = 37.4 bits (85), Expect(2) = 3e-11
 Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 44/134 (32%)
 Frame = +1

Query: 97  PQRSCRRSLNFDILQXXXXXXXXXHASGF-----QSQISYAKIQSAMQLGQGPEGSAVK- 258
           P++SCRR+LNF+  +          +S       Q++ +   +QSA QLGQG E    K 
Sbjct: 394 PRKSCRRTLNFEFERQASDENSSYRSSTLDLHANQTESTAQCVQSA-QLGQGVEAPNEKT 452

Query: 259 --------------------------------------GQSDQIADVQSWSTRGKCRIVF 324
                                                      I   Q+ STRG  RI F
Sbjct: 453 AVGTTYNINCSLNQELRNYLSQHEVQYLGSPSLDKVGWNHDKVIVGNQNESTRGNYRINF 512

Query: 325 SDVTHDNESNVVQM 366
           SD+T D ++++VQM
Sbjct: 513 SDLTRDKQASIVQM 526


>dbj|BAF52858.1| repressor of silencing 3 [Nicotiana tabacum]
          Length = 1662

 Score = 55.5 bits (132), Expect(2) = 1e-09
 Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
 Frame = +2

Query: 377  ILLQPSNSPNESNCSTSAPVSKEEHARRMKRGHP--SAAVDLYSNNIIGADHNSVQAYLA 550
            IL     S N SNCS+S  +    H + +KR H   +     YS N  G   NS+QAY A
Sbjct: 537  ILQMTPQSLNCSNCSSSTCLP---HGKGLKRQHSYRTNEAQFYSLNARGVYFNSMQAYQA 593

Query: 551  MFXXXXXXXXXXXXMHFPAIYKKKRTDKCQNLIDKTTEYSPKANWGHAFTLERNYM---- 718
            +             MH PA YKKKRT++          +S  A++   FT E N++    
Sbjct: 594  ILPANEPEVYSNLGMHCPATYKKKRTEE---------GHSSAASYIKHFTSEINHVPSSR 644

Query: 719  -------------SFAAQCTKPLSFITMLDTGNKETRKKRSEASTRVPDIASLIEIAESI 859
                         + A    +   F+  +    K  RK RS+ +T+V ++AS+ EI +  
Sbjct: 645  CNISGSPSNNSSTNIAYNRLQNSDFVPAVVEAGK-LRKGRSKGATQVHELASVHEIYKQF 703

Query: 860  QST 868
            Q++
Sbjct: 704  QTS 706



 Score = 34.3 bits (77), Expect(2) = 1e-09
 Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 44/134 (32%)
 Frame = +1

Query: 97  PQRSCRRSLNFDILQXXXXXXXXXHASGF-----QSQISYAKIQSAMQLGQGPEGSAVK- 258
           P++SCR++LNF+  +           S       Q++ +   +QSA QLGQG E    K 
Sbjct: 408 PRKSCRKTLNFEFERQASDENSSYRPSTLDLHANQTESTAQCVQSA-QLGQGMEAPHEKT 466

Query: 259 --------------------------------------GQSDQIADVQSWSTRGKCRIVF 324
                                                    + +   Q+ STRG  RI F
Sbjct: 467 GVGTTYNIKCSLNQELRNYLSQHEVQYLGSPSLDKVGWNHDEVMVGNQNESTRGNYRINF 526

Query: 325 SDVTHDNESNVVQM 366
           SD+T D +++++QM
Sbjct: 527 SDLTRDKQASILQM 540