BLASTX nr result

ID: Cnidium21_contig00005760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005760
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547025.1| PREDICTED: nucleolar complex protein 2 homol...    62   1e-15
gb|ABG37664.1| unknown [Populus trichocarpa]                           54   2e-15
ref|XP_003592650.1| Nucleolar complex protein-like protein [Medi...    57   2e-15
emb|CBI24319.3| unnamed protein product [Vitis vinifera]               55   4e-15
ref|XP_002268336.2| PREDICTED: nucleolar complex protein 2 homol...    55   4e-15

>ref|XP_003547025.1| PREDICTED: nucleolar complex protein 2 homolog [Glycine max]
          Length = 817

 Score = 61.6 bits (148), Expect(2) = 1e-15
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = -1

Query: 247 LRNFCKSTKVERSRREMRQLICQIEANSEYIIVKRMPISLL 125
           LR+FCKST+VER R+EMRQLICQIEA+S+Y+  KR+ IS L
Sbjct: 626 LRSFCKSTRVERFRKEMRQLICQIEASSDYLNGKRLSISFL 666



 Score = 46.2 bits (108), Expect(2) = 1e-15
 Identities = 21/36 (58%), Positives = 27/36 (75%)
 Frame = -2

Query: 117 VPIDPTASSFLEDERKSGSSPLSQYTAILRQKAQQK 10
           +P DP A+SFLEDE+K  SS LS+Y   L Q+A+QK
Sbjct: 666 LPNDPAAASFLEDEKKPASSALSKYVVTLHQRAEQK 701


>gb|ABG37664.1| unknown [Populus trichocarpa]
          Length = 1238

 Score = 53.9 bits (128), Expect(2) = 2e-15
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = -2

Query: 123 LVVPIDPTASSFLEDERKSGSSPLSQYTAILRQKAQQK 10
           + +P DPTA+SFLEDE+KSG+SPL +Y A LRQ AQQ+
Sbjct: 661 IFLPNDPTAASFLEDEKKSGASPLLRYVATLRQIAQQR 698



 Score = 53.1 bits (126), Expect(2) = 2e-15
 Identities = 27/49 (55%), Positives = 35/49 (71%)
 Frame = -1

Query: 271 IICSCRAGLRNFCKSTKVERSRREMRQLICQIEANSEYIIVKRMPISLL 125
           I  S    LR+FCKSTK+ER +++MR+LI QIEANS++   KRM I  L
Sbjct: 615 IAASTATRLRSFCKSTKIERFQKQMRELIRQIEANSKFTNEKRMSIIFL 663


>ref|XP_003592650.1| Nucleolar complex protein-like protein [Medicago truncatula]
           gi|355481698|gb|AES62901.1| Nucleolar complex
           protein-like protein [Medicago truncatula]
          Length = 731

 Score = 56.6 bits (135), Expect(2) = 2e-15
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = -1

Query: 247 LRNFCKSTKVERSRREMRQLICQIEANSEYIIVKRMPISLL 125
           LRNFCK TKVER RREMRQLI +IEAN +++  +RM IS L
Sbjct: 520 LRNFCKLTKVERFRREMRQLIREIEANVQFVNERRMSISFL 560



 Score = 50.4 bits (119), Expect(2) = 2e-15
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -2

Query: 117 VPIDPTASSFLEDERKSGSSPLSQYTAILRQKAQQK 10
           +P DP ASSFLEDE+KS SS LS+Y   LRQ+A+QK
Sbjct: 560 LPNDPAASSFLEDEKKSASSALSKYVITLRQRAKQK 595


>emb|CBI24319.3| unnamed protein product [Vitis vinifera]
          Length = 776

 Score = 54.7 bits (130), Expect(2) = 4e-15
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -1

Query: 247 LRNFCKSTKVERSRREMRQLICQIEANSEYIIVKRMPISLL 125
           LR+FCK+TK+ER RREMRQLI  I+ANSE+   +RM IS L
Sbjct: 535 LRSFCKATKIERFRREMRQLIHNIQANSEFTNERRMCISFL 575



 Score = 51.2 bits (121), Expect(2) = 4e-15
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -2

Query: 117 VPIDPTASSFLEDERKSGSSPLSQYTAILRQKAQQK 10
           +P DP A++FLE E+KSG+SPLSQY A L Q+AQQ+
Sbjct: 575 LPNDPAATTFLEAEKKSGASPLSQYVATLHQRAQQR 610


>ref|XP_002268336.2| PREDICTED: nucleolar complex protein 2 homolog [Vitis vinifera]
          Length = 744

 Score = 54.7 bits (130), Expect(2) = 4e-15
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -1

Query: 247 LRNFCKSTKVERSRREMRQLICQIEANSEYIIVKRMPISLL 125
           LR+FCK+TK+ER RREMRQLI  I+ANSE+   +RM IS L
Sbjct: 503 LRSFCKATKIERFRREMRQLIHNIQANSEFTNERRMCISFL 543



 Score = 51.2 bits (121), Expect(2) = 4e-15
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -2

Query: 117 VPIDPTASSFLEDERKSGSSPLSQYTAILRQKAQQK 10
           +P DP A++FLE E+KSG+SPLSQY A L Q+AQQ+
Sbjct: 543 LPNDPAATTFLEAEKKSGASPLSQYVATLHQRAQQR 578


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