BLASTX nr result

ID: Cnidium21_contig00005726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005726
         (1449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor ...   627   e-177
ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi...   627   e-177
ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor ...   622   e-176
ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor ...   621   e-175
gb|ACU19502.1| unknown [Glycine max]                                  616   e-174

>ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max]
          Length = 497

 Score =  627 bits (1618), Expect = e-177
 Identities = 304/412 (73%), Positives = 343/412 (83%), Gaps = 3/412 (0%)
 Frame = +3

Query: 33   DKAVVDVLKREVGQISNRTFAHRLAASEDLVLRLDLHGKLEKHRGCVNTVSFSSDGDILV 212
            +KA+ D+  RE+G +  R FA RL ASEDLVLRL+L   L+KHRGCVNTVSF++DGD LV
Sbjct: 12   NKAIPDLCNRELGHLPPRNFALRLGASEDLVLRLELLRNLQKHRGCVNTVSFNADGDTLV 71

Query: 213  SGSDDRRVILWDWQCGRIKLAFHTGHNNNVFQAKFMPFSDDRSIVTCAADGQVRHAKILE 392
            SGSDD  VILWDW+ GRIKL+FH+GH+NNVFQAKFMP S DR+IVTCAADGQVRHA+ILE
Sbjct: 72   SGSDDWGVILWDWETGRIKLSFHSGHSNNVFQAKFMPHSHDRTIVTCAADGQVRHAQILE 131

Query: 393  RGHVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQSVQD- 569
             G VETK LAKHQGRAHKLA+EPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQ ++D 
Sbjct: 132  NGRVETKCLAKHQGRAHKLAVEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQPIKDR 191

Query: 570  -GLMPVVRLNAIAVDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSSDFGQPADYFCPQHLI 746
               MPV+ LNAIA+DPRNPNLFAVAGSDEY RLYDIR+YKWDGS+DFGQP D+FCP HLI
Sbjct: 192  WSYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRRYKWDGSTDFGQPTDFFCPPHLI 251

Query: 747  GDGLVGITGLAFSDQSELLATYNDEFIYLFTKDMGLGPD-PDLTSPKYMDSDADXXXXXX 923
            GD  VGITGLAFS+Q ELL +YNDE IYLFT+DMGLGP+ PD  SPK M+SDA       
Sbjct: 252  GDQQVGITGLAFSEQRELLVSYNDELIYLFTQDMGLGPNPPDPGSPKSMNSDASEIGFSH 311

Query: 924  XXXXXXXXXXXXXXXXPQVYKGHRNSETVKGVNFFGPRCEYVVSGSDCGRIFIWRKRTGE 1103
                            PQV+KGHRN ETVKGVNFFGP+CEYVVSGSDCGRIFIW+K+ G+
Sbjct: 312  GSVSSQSNMDADDKITPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGQ 371

Query: 1104 LLRVMEADKQVVNCIEPHPHTTALASSGIESDIKLWIPKAVERATLPKNIEK 1259
            L+RVMEADK VVNCIE HPHT  LASSGIE+DIK+W PKA+E+ATLPKNIE+
Sbjct: 372  LIRVMEADKHVVNCIESHPHTMVLASSGIENDIKIWTPKALEKATLPKNIEQ 423


>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
            gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 482

 Score =  627 bits (1617), Expect = e-177
 Identities = 307/420 (73%), Positives = 347/420 (82%), Gaps = 2/420 (0%)
 Frame = +3

Query: 27   NLDKAVVDVLKREVGQISNRTFAHRLAASEDLVLRLDLHGKLEKHRGCVNTVSFSSDGDI 206
            N DKAV++V +REVG++S R FAHRLAASEDLVLRLDL+ KL+KHRGCVNTVSF+++GDI
Sbjct: 8    NPDKAVLNVWQREVGELSTRNFAHRLAASEDLVLRLDLYKKLDKHRGCVNTVSFNANGDI 67

Query: 207  LVSGSDDRRVILWDWQCGRIKLAFHTGHNNNVFQAKFMPFSDDRSIVTCAADGQVRHAKI 386
            LVSGSDDRRVILWDW+ GRIKL+FH+GH  NVFQAK MP++DDRSIVTCAADGQVR A+I
Sbjct: 68   LVSGSDDRRVILWDWESGRIKLSFHSGHTKNVFQAKIMPYTDDRSIVTCAADGQVRFAQI 127

Query: 387  LERGHVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQSVQ 566
            LE G VET LLAKHQGRAHKLAIEPGSP+I YTCGEDGLVQHFDLRT  ATELF+C+ + 
Sbjct: 128  LECGAVETTLLAKHQGRAHKLAIEPGSPYILYTCGEDGLVQHFDLRTRRATELFSCRPID 187

Query: 567  D--GLMPVVRLNAIAVDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSSDFGQPADYFCPQH 740
            D    MPVV LNAI +DPRNPNLFAVAGSDEYTRLYDIR YKWDGS++FGQP DYFCP H
Sbjct: 188  DRREYMPVVHLNAITIDPRNPNLFAVAGSDEYTRLYDIRMYKWDGSTEFGQPTDYFCPPH 247

Query: 741  LIGDGLVGITGLAFSDQSELLATYNDEFIYLFTKDMGLGPDPDLTSPKYMDSDADXXXXX 920
            LIGD  VGITGL+FSDQSELL +YNDE IYLFT+DMGLGP+PD +SP  + S A      
Sbjct: 248  LIGDERVGITGLSFSDQSELLVSYNDELIYLFTRDMGLGPNPDPSSPVSIGSSA------ 301

Query: 921  XXXXXXXXXXXXXXXXXPQVYKGHRNSETVKGVNFFGPRCEYVVSGSDCGRIFIWRKRTG 1100
                             PQVY+GH+N ETVKGV+FFGP CEYVVSGSDCGRIFIW+K+ G
Sbjct: 302  ----GELACMDVDGKVSPQVYEGHQNCETVKGVSFFGPGCEYVVSGSDCGRIFIWKKKGG 357

Query: 1101 ELLRVMEADKQVVNCIEPHPHTTALASSGIESDIKLWIPKAVERATLPKNIEKVLMPGRG 1280
            EL+R MEADK VVNCIEPHPH T LASSGIE+DIK+W PKA+ERATLP NI ++    RG
Sbjct: 358  ELIRAMEADKHVVNCIEPHPHATVLASSGIENDIKMWTPKAIERATLPTNIGRLKPKARG 417


>ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 2 [Glycine
            max]
          Length = 490

 Score =  622 bits (1605), Expect = e-176
 Identities = 303/421 (71%), Positives = 344/421 (81%), Gaps = 3/421 (0%)
 Frame = +3

Query: 27   NLDKAVVDVLKREVGQISNRTFAHRLAASEDLVLRLDLHGKLEKHRGCVNTVSFSSDGDI 206
            N  KA+ D+  REVG +S R FA RL +SEDLVLRL L   L+KHRGCVN VSF++DGDI
Sbjct: 2    NKRKALPDLCNREVGHLSPRNFALRLGSSEDLVLRLQLLRNLQKHRGCVNAVSFNADGDI 61

Query: 207  LVSGSDDRRVILWDWQCGRIKLAFHTGHNNNVFQAKFMPFSDDRSIVTCAADGQVRHAKI 386
            LVSGSDD  +ILWDW+ GRI+L+FH+GH+NNVFQAK MP SDDR+IVTCAADGQVRHA++
Sbjct: 62   LVSGSDDCGIILWDWETGRIRLSFHSGHSNNVFQAKIMPHSDDRTIVTCAADGQVRHAQL 121

Query: 387  LERGHVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQSVQ 566
            LE G VETK LAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQ FDLRTGAATELFTCQ ++
Sbjct: 122  LENGRVETKCLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQRFDLRTGAATELFTCQPIK 181

Query: 567  D--GLMPVVRLNAIAVDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSSDFGQPADYFCPQH 740
            D    MPV+ LNAIA+DPRNPNLFAVAGSDEY RLYDIRKYKWDGS+DFGQP ++FCP H
Sbjct: 182  DRWSYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRKYKWDGSTDFGQPTNFFCPPH 241

Query: 741  LIGDGLVGITGLAFSDQSELLATYNDEFIYLFTKDMGLGPD-PDLTSPKYMDSDADXXXX 917
            LIGD  VGITGLAFS+  ELL +YNDE IYLFT+DMGLGP+ PD  SPK M+SDA     
Sbjct: 242  LIGDQQVGITGLAFSELRELLVSYNDELIYLFTQDMGLGPNPPDPVSPKSMNSDASEIGF 301

Query: 918  XXXXXXXXXXXXXXXXXXPQVYKGHRNSETVKGVNFFGPRCEYVVSGSDCGRIFIWRKRT 1097
                              PQV+KGHRN ETVKGVNFFGP+CEYVVSGSDCGRIFIW+K++
Sbjct: 302  SHGSVSSQSKMDADEKVTPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKS 361

Query: 1098 GELLRVMEADKQVVNCIEPHPHTTALASSGIESDIKLWIPKAVERATLPKNIEKVLMPGR 1277
            G+L+RVMEADK VVNCIE HPHT  LASSGIE DIK+W PKA+E+ATLPKNIE++    +
Sbjct: 362  GQLIRVMEADKYVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKNIEQLKPKAK 421

Query: 1278 G 1280
            G
Sbjct: 422  G 422


>ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 1 [Glycine
            max]
          Length = 489

 Score =  621 bits (1601), Expect = e-175
 Identities = 302/414 (72%), Positives = 341/414 (82%), Gaps = 3/414 (0%)
 Frame = +3

Query: 27   NLDKAVVDVLKREVGQISNRTFAHRLAASEDLVLRLDLHGKLEKHRGCVNTVSFSSDGDI 206
            N  KA+ D+  REVG +S R FA RL +SEDLVLRL L   L+KHRGCVN VSF++DGDI
Sbjct: 2    NKRKALPDLCNREVGHLSPRNFALRLGSSEDLVLRLQLLRNLQKHRGCVNAVSFNADGDI 61

Query: 207  LVSGSDDRRVILWDWQCGRIKLAFHTGHNNNVFQAKFMPFSDDRSIVTCAADGQVRHAKI 386
            LVSGSDD  +ILWDW+ GRI+L+FH+GH+NNVFQAK MP SDDR+IVTCAADGQVRHA++
Sbjct: 62   LVSGSDDCGIILWDWETGRIRLSFHSGHSNNVFQAKIMPHSDDRTIVTCAADGQVRHAQL 121

Query: 387  LERGHVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQSVQ 566
            LE G VETK LAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQ FDLRTGAATELFTCQ ++
Sbjct: 122  LENGRVETKCLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQRFDLRTGAATELFTCQPIK 181

Query: 567  D--GLMPVVRLNAIAVDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSSDFGQPADYFCPQH 740
            D    MPV+ LNAIA+DPRNPNLFAVAGSDEY RLYDIRKYKWDGS+DFGQP ++FCP H
Sbjct: 182  DRWSYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRKYKWDGSTDFGQPTNFFCPPH 241

Query: 741  LIGDGLVGITGLAFSDQSELLATYNDEFIYLFTKDMGLGPD-PDLTSPKYMDSDADXXXX 917
            LIGD  VGITGLAFS+  ELL +YNDE IYLFT+DMGLGP+ PD  SPK M+SDA     
Sbjct: 242  LIGDQQVGITGLAFSELRELLVSYNDELIYLFTQDMGLGPNPPDPVSPKSMNSDASEIGF 301

Query: 918  XXXXXXXXXXXXXXXXXXPQVYKGHRNSETVKGVNFFGPRCEYVVSGSDCGRIFIWRKRT 1097
                              PQV+KGHRN ETVKGVNFFGP+CEYVVSGSDCGRIFIW+K++
Sbjct: 302  SHGSVSSQSKMDADEKVTPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKS 361

Query: 1098 GELLRVMEADKQVVNCIEPHPHTTALASSGIESDIKLWIPKAVERATLPKNIEK 1259
            G+L+RVMEADK VVNCIE HPHT  LASSGIE DIK+W PKA+E+ATLPKNIE+
Sbjct: 362  GQLIRVMEADKYVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKNIEQ 415


>gb|ACU19502.1| unknown [Glycine max]
          Length = 489

 Score =  616 bits (1589), Expect = e-174
 Identities = 301/414 (72%), Positives = 340/414 (82%), Gaps = 3/414 (0%)
 Frame = +3

Query: 27   NLDKAVVDVLKREVGQISNRTFAHRLAASEDLVLRLDLHGKLEKHRGCVNTVSFSSDGDI 206
            N  KA+ D+  REVG +S R FA RL +SEDLVLRL L   L+KHRGCVN VSF++DGDI
Sbjct: 2    NKRKALPDLCNREVGHLSPRNFALRLDSSEDLVLRLQLLRNLQKHRGCVNAVSFNADGDI 61

Query: 207  LVSGSDDRRVILWDWQCGRIKLAFHTGHNNNVFQAKFMPFSDDRSIVTCAADGQVRHAKI 386
            LVSGSDD  +ILWDW+ GRI+L+FH+GH+NNVFQAK MP SDDR+IVTCAADGQVRHA++
Sbjct: 62   LVSGSDDCGIILWDWETGRIRLSFHSGHSNNVFQAKIMPHSDDRTIVTCAADGQVRHAQL 121

Query: 387  LERGHVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQSVQ 566
            LE G VETK LAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQ FDLRTGAATELFTCQ ++
Sbjct: 122  LENGRVETKCLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQRFDLRTGAATELFTCQPIK 181

Query: 567  D--GLMPVVRLNAIAVDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSSDFGQPADYFCPQH 740
            D    MPV+ LNAIA+DPRNPNLFAVAGSDEY RLYDIRKYKWDGS+ FGQP ++FCP H
Sbjct: 182  DRWSYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRKYKWDGSTGFGQPTNFFCPPH 241

Query: 741  LIGDGLVGITGLAFSDQSELLATYNDEFIYLFTKDMGLGPD-PDLTSPKYMDSDADXXXX 917
            LIGD  VGITGLAFS+  ELL +YNDE IYLFT+DMGLGP+ PD  SPK M+SDA     
Sbjct: 242  LIGDQQVGITGLAFSELRELLVSYNDELIYLFTQDMGLGPNPPDPVSPKSMNSDASEIGF 301

Query: 918  XXXXXXXXXXXXXXXXXXPQVYKGHRNSETVKGVNFFGPRCEYVVSGSDCGRIFIWRKRT 1097
                              PQV+KGHRN ETVKGVNFFGP+CEYVVSGSDCGRIFIW+K++
Sbjct: 302  SHGSVSSQSKMDADEKVTPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWKKKS 361

Query: 1098 GELLRVMEADKQVVNCIEPHPHTTALASSGIESDIKLWIPKAVERATLPKNIEK 1259
            G+L+RVMEADK VVNCIE HPHT  LASSGIE DIK+W PKA+E+ATLPKNIE+
Sbjct: 362  GQLIRVMEADKYVVNCIEFHPHTMVLASSGIEHDIKIWTPKALEKATLPKNIEQ 415


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