BLASTX nr result

ID: Cnidium21_contig00005725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005725
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]         231   1e-58
ref|XP_002527284.1| Photosystem I reaction center subunit XI, ch...   229   6e-58
gb|AFW90576.1| photosystem I subunit XI Mrna (chloroplast) [Sola...   228   1e-57
ref|XP_002320562.1| hypothetical protein POPTRDRAFT_732598 [Popu...   223   3e-56
ref|XP_002303024.1| predicted protein [Populus trichocarpa] gi|2...   222   5e-56

>gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]
          Length = 220

 Score =  231 bits (589), Expect = 1e-58
 Identities = 116/152 (76%), Positives = 127/152 (83%), Gaps = 2/152 (1%)
 Frame = +1

Query: 271 NQLKSSFTSSLTRG--LVSPKGLCGAPLRVLPSRRNSSFTIKAVQADKPTYQVIQPINGD 444
           +QLKS F SSLTRG  LV+PKG+ G+P ++ PS R S FTIKAVQ DKPTYQVIQP+NGD
Sbjct: 10  SQLKSKFASSLTRGSGLVTPKGISGSPFKIFPSTRKSCFTIKAVQTDKPTYQVIQPLNGD 69

Query: 445 PFIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGLLLVGPFVKAGPLRNT 624
           PFIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHG LLVGPFVKAGPLRNT
Sbjct: 70  PFIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNT 129

Query: 625 EFXXXXXXXXXXXXVTILSICLTMYGIASFKE 720
           E+            V ILS+CLT+YGI+SFKE
Sbjct: 130 EYAGGAGSLAAAGLVVILSMCLTIYGISSFKE 161


>ref|XP_002527284.1| Photosystem I reaction center subunit XI, chloroplast precursor,
           putative [Ricinus communis] gi|223533377|gb|EEF35128.1|
           Photosystem I reaction center subunit XI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 218

 Score =  229 bits (583), Expect = 6e-58
 Identities = 112/150 (74%), Positives = 127/150 (84%)
 Frame = +1

Query: 271 NQLKSSFTSSLTRGLVSPKGLCGAPLRVLPSRRNSSFTIKAVQADKPTYQVIQPINGDPF 450
           +QLKSSF SS+TRGL  P+G+ G P RV P++R +SFT+KA+Q++KPT+QVIQPINGDPF
Sbjct: 10  SQLKSSFASSVTRGLGVPRGISGNPFRVSPAKRATSFTVKAIQSEKPTFQVIQPINGDPF 69

Query: 451 IGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGLLLVGPFVKAGPLRNTEF 630
           IGSLETPVTSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHG LLVGPFVKAGPLRNTEF
Sbjct: 70  IGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGPLRNTEF 129

Query: 631 XXXXXXXXXXXXVTILSICLTMYGIASFKE 720
                       V ILSICLTMYG+ASF E
Sbjct: 130 AGAAGSLAAGGLVAILSICLTMYGVASFNE 159


>gb|AFW90576.1| photosystem I subunit XI Mrna (chloroplast) [Solanum tuberosum]
          Length = 213

 Score =  228 bits (580), Expect = 1e-57
 Identities = 114/152 (75%), Positives = 128/152 (84%), Gaps = 2/152 (1%)
 Frame = +1

Query: 271 NQLKSSFTSSLTRG--LVSPKGLCGAPLRVLPSRRNSSFTIKAVQADKPTYQVIQPINGD 444
           +QLKSSF SSLTRG  LV+PKG+ GAP ++ PS R S FT+KAVQADKPT+QVIQP+NGD
Sbjct: 10  SQLKSSFASSLTRGHGLVTPKGISGAPFKIFPSTRKSCFTVKAVQADKPTFQVIQPLNGD 69

Query: 445 PFIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGLLLVGPFVKAGPLRNT 624
           PFIGS ETPVTSSPLIAWYLSNLPAYRTAV+PLLRGVEVGLAHG LLVGPFVKAGPLRNT
Sbjct: 70  PFIGSPETPVTSSPLIAWYLSNLPAYRTAVDPLLRGVEVGLAHGFLLVGPFVKAGPLRNT 129

Query: 625 EFXXXXXXXXXXXXVTILSICLTMYGIASFKE 720
           ++            V ILS+CLT+YGI+SFKE
Sbjct: 130 DYAGGAGSLAAAGLVVILSMCLTIYGISSFKE 161


>ref|XP_002320562.1| hypothetical protein POPTRDRAFT_732598 [Populus trichocarpa]
           gi|118487151|gb|ABK95404.1| unknown [Populus
           trichocarpa] gi|118488447|gb|ABK96038.1| unknown
           [Populus trichocarpa] gi|222861335|gb|EEE98877.1|
           hypothetical protein POPTRDRAFT_732598 [Populus
           trichocarpa]
          Length = 216

 Score =  223 bits (568), Expect = 3e-56
 Identities = 113/150 (75%), Positives = 124/150 (82%)
 Frame = +1

Query: 271 NQLKSSFTSSLTRGLVSPKGLCGAPLRVLPSRRNSSFTIKAVQADKPTYQVIQPINGDPF 450
           +QLKSS  SSL R LV P+G+ GAP RV P++R  SFT+KAVQADKPTYQV+QPINGDPF
Sbjct: 10  SQLKSSLASSLGRRLVIPRGISGAPFRVSPNKR--SFTVKAVQADKPTYQVVQPINGDPF 67

Query: 451 IGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGLLLVGPFVKAGPLRNTEF 630
           IGSLETPVTSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHG LLVGPFVKAGPLRNTE+
Sbjct: 68  IGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGPLRNTEY 127

Query: 631 XXXXXXXXXXXXVTILSICLTMYGIASFKE 720
                       + ILSICLTMYG ASF E
Sbjct: 128 AGAAGSLAAGGLIVILSICLTMYGAASFTE 157


>ref|XP_002303024.1| predicted protein [Populus trichocarpa] gi|222844750|gb|EEE82297.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  222 bits (566), Expect = 5e-56
 Identities = 111/150 (74%), Positives = 124/150 (82%)
 Frame = +1

Query: 271 NQLKSSFTSSLTRGLVSPKGLCGAPLRVLPSRRNSSFTIKAVQADKPTYQVIQPINGDPF 450
           +QLKSSF SSL R LV P  + GAP RV PS+R  SFT+KA+Q++KPTYQV+QPINGDPF
Sbjct: 10  SQLKSSFASSLARRLVIPTAISGAPFRVSPSKR--SFTVKAIQSEKPTYQVVQPINGDPF 67

Query: 451 IGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGLLLVGPFVKAGPLRNTEF 630
           IGSLETP+TSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHG LLVGPFVKAGPLRNTE+
Sbjct: 68  IGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGPLRNTEY 127

Query: 631 XXXXXXXXXXXXVTILSICLTMYGIASFKE 720
                       V ILSICLTMYG+ASF E
Sbjct: 128 AGAAGSLAAGGLVAILSICLTMYGVASFTE 157


Top