BLASTX nr result

ID: Cnidium21_contig00005712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005712
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23698.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257...   124   1e-26
emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]   124   1e-26
ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleop...   124   2e-26
ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homol...   123   2e-26

>emb|CBI23698.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  124 bits (311), Expect = 1e-26
 Identities = 61/99 (61%), Positives = 75/99 (75%), Gaps = 3/99 (3%)
 Frame = +3

Query: 342 AGRNCGGGENDRTKKIIVGGLPPDLSKGEFSHYFEYYGHVTDVEILYEEQTCQSRGFGVV 521
           + RN GGG N +TKKI VGGLPP LS+  F  YFE +GHVTDV ++Y++ T + RGFG V
Sbjct: 97  SARNSGGGGNVKTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFV 156

Query: 522 SFDSENVVDRVLHKKYHDLGGKRVEVKRAPPK---MGGG 629
           SFD+E+ VDRVL+K +HDL GK+VEVKRA PK    GGG
Sbjct: 157 SFDTEDAVDRVLYKTFHDLNGKQVEVKRALPKDANPGGG 195



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/75 (37%), Positives = 46/75 (61%)
 Frame = +3

Query: 384 KIIVGGLPPDLSKGEFSHYFEYYGHVTDVEILYEEQTCQSRGFGVVSFDSENVVDRVLHK 563
           K+ +GG+  + S+ +   YF  YG V+   ++ ++ T + RGFG V F   +++DRVL +
Sbjct: 7   KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66

Query: 564 KYHDLGGKRVEVKRA 608
           K H + G+ VE KRA
Sbjct: 67  K-HIIDGRTVEAKRA 80


>ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
          Length = 464

 Score =  124 bits (311), Expect = 1e-26
 Identities = 61/99 (61%), Positives = 75/99 (75%), Gaps = 3/99 (3%)
 Frame = +3

Query: 342 AGRNCGGGENDRTKKIIVGGLPPDLSKGEFSHYFEYYGHVTDVEILYEEQTCQSRGFGVV 521
           + RN GGG N +TKKI VGGLPP LS+  F  YFE +GHVTDV ++Y++ T + RGFG V
Sbjct: 97  SARNSGGGGNVKTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFV 156

Query: 522 SFDSENVVDRVLHKKYHDLGGKRVEVKRAPPK---MGGG 629
           SFD+E+ VDRVL+K +HDL GK+VEVKRA PK    GGG
Sbjct: 157 SFDTEDAVDRVLYKTFHDLNGKQVEVKRALPKDANPGGG 195



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/75 (37%), Positives = 46/75 (61%)
 Frame = +3

Query: 384 KIIVGGLPPDLSKGEFSHYFEYYGHVTDVEILYEEQTCQSRGFGVVSFDSENVVDRVLHK 563
           K+ +GG+  + S+ +   YF  YG V+   ++ ++ T + RGFG V F   +++DRVL +
Sbjct: 7   KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66

Query: 564 KYHDLGGKRVEVKRA 608
           K H + G+ VE KRA
Sbjct: 67  K-HIIDGRTVEAKRA 80


>emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
          Length = 464

 Score =  124 bits (311), Expect = 1e-26
 Identities = 61/99 (61%), Positives = 75/99 (75%), Gaps = 3/99 (3%)
 Frame = +3

Query: 342 AGRNCGGGENDRTKKIIVGGLPPDLSKGEFSHYFEYYGHVTDVEILYEEQTCQSRGFGVV 521
           + RN GGG N +TKKI VGGLPP LS+  F  YFE +GHVTDV ++Y++ T + RGFG V
Sbjct: 97  SARNSGGGGNVKTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFV 156

Query: 522 SFDSENVVDRVLHKKYHDLGGKRVEVKRAPPK---MGGG 629
           SFD+E+ VDRVL+K +HDL GK+VEVKRA PK    GGG
Sbjct: 157 SFDTEDAVDRVLYKTFHDLNGKQVEVKRALPKDANPGGG 195



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/75 (37%), Positives = 46/75 (61%)
 Frame = +3

Query: 384 KIIVGGLPPDLSKGEFSHYFEYYGHVTDVEILYEEQTCQSRGFGVVSFDSENVVDRVLHK 563
           K+ +GG+  + S+ +   YF  YG V+   ++ ++ T + RGFG V F   +++DRVL +
Sbjct: 7   KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66

Query: 564 KYHDLGGKRVEVKRA 608
           K H + G+ VE KRA
Sbjct: 67  K-HIIDGRTVEAKRA 80


>ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
           sativus]
          Length = 462

 Score =  124 bits (310), Expect = 2e-26
 Identities = 60/93 (64%), Positives = 71/93 (76%), Gaps = 2/93 (2%)
 Frame = +3

Query: 345 GRNCGG--GENDRTKKIIVGGLPPDLSKGEFSHYFEYYGHVTDVEILYEEQTCQSRGFGV 518
           GRN GG  G N RTKKI VGGLPP L++  F  YFE YGHVTDV ++Y++ T + RGFG 
Sbjct: 97  GRNSGGSGGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGF 156

Query: 519 VSFDSENVVDRVLHKKYHDLGGKRVEVKRAPPK 617
           +SFD+E  VDRVLHK +HDL GK+VEVKRA PK
Sbjct: 157 ISFDTEEAVDRVLHKTFHDLNGKQVEVKRALPK 189



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 30/75 (40%), Positives = 44/75 (58%)
 Frame = +3

Query: 384 KIIVGGLPPDLSKGEFSHYFEYYGHVTDVEILYEEQTCQSRGFGVVSFDSENVVDRVLHK 563
           K+ +GG+  + S+ +   YF  YG V    ++ ++ T + RGFG V F   +V+DRVL  
Sbjct: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66

Query: 564 KYHDLGGKRVEVKRA 608
           K H + GK VE KRA
Sbjct: 67  K-HTIDGKTVEAKRA 80


>ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
          Length = 471

 Score =  123 bits (309), Expect = 2e-26
 Identities = 57/92 (61%), Positives = 72/92 (78%)
 Frame = +3

Query: 342 AGRNCGGGENDRTKKIIVGGLPPDLSKGEFSHYFEYYGHVTDVEILYEEQTCQSRGFGVV 521
           +G N G G N RTKKI VGGLPP L++ +F  YFE YG+VTDV ++Y++ T + RGFG +
Sbjct: 99  SGMNSGNGGNIRTKKIFVGGLPPTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFI 158

Query: 522 SFDSENVVDRVLHKKYHDLGGKRVEVKRAPPK 617
           SFD+E+ VDRVLHK +HDL GK+VEVKRA PK
Sbjct: 159 SFDTEDAVDRVLHKSFHDLNGKQVEVKRALPK 190



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/75 (36%), Positives = 44/75 (58%)
 Frame = +3

Query: 384 KIIVGGLPPDLSKGEFSHYFEYYGHVTDVEILYEEQTCQSRGFGVVSFDSENVVDRVLHK 563
           K+ +GG+  D ++ +   +F  YG V    ++ E+ T + RGFG V F   N++DRVL  
Sbjct: 7   KLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLED 66

Query: 564 KYHDLGGKRVEVKRA 608
           K H + G+ V+ K+A
Sbjct: 67  K-HVIDGRTVDAKKA 80


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