BLASTX nr result

ID: Cnidium21_contig00005672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005672
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera]   112   8e-23
ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   100   2e-19
emb|CBI14966.3| unnamed protein product [Vitis vinifera]               99   7e-19
ref|XP_004138092.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    98   2e-18
ref|XP_002866536.1| hypothetical protein ARALYDRAFT_496494 [Arab...    97   3e-18

>emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera]
          Length = 692

 Score =  112 bits (280), Expect = 8e-23
 Identities = 67/111 (60%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = +2

Query: 401 TVMVLVLMTARLTHSSL-IH*LDIMEVGGGALSLQG*DVKDIKCVINYDFPSSLEDYVHX 577
           TVM LV++ ARLTH+S+ I+  D  E  G        DVKDIKCVINYDFPSSLEDYVH 
Sbjct: 549 TVMELVVVAARLTHTSIFINFSDGFESDGDG------DVKDIKCVINYDFPSSLEDYVHR 602

Query: 578 XXXXXXXXXXXXXXXFFTHSNAKHARDLIKILQEAGQVVPIPLSSLARSSG 730
                          FFTHSNAK ARDLIKILQEAGQVV   LS++ARSSG
Sbjct: 603 IGRTGRAGAKGTAITFFTHSNAKFARDLIKILQEAGQVVSPALSAMARSSG 653


>ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Vitis
           vinifera]
          Length = 611

 Score =  100 bits (250), Expect = 2e-19
 Identities = 53/80 (66%), Positives = 58/80 (72%)
 Frame = +2

Query: 491 LSLQG*DVKDIKCVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHSNAKHARDLIKI 670
           ++ +G DVKDIKCVINYDFPSSLEDYVH                FFTHSNAK ARDLIKI
Sbjct: 493 VAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAITFFTHSNAKFARDLIKI 552

Query: 671 LQEAGQVVPIPLSSLARSSG 730
           LQEAGQVV   LS++ARSSG
Sbjct: 553 LQEAGQVVSPALSAMARSSG 572


>emb|CBI14966.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 52/74 (70%), Positives = 54/74 (72%)
 Frame = +2

Query: 509 DVKDIKCVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHSNAKHARDLIKILQEAGQ 688
           DVKDIKCVINYDFPSSLEDYVH                FFTHSNAK ARDLIKILQEAGQ
Sbjct: 20  DVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAITFFTHSNAKFARDLIKILQEAGQ 79

Query: 689 VVPIPLSSLARSSG 730
           VV   LS++ARSSG
Sbjct: 80  VVSPALSAMARSSG 93


>ref|XP_004138092.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
           sativus] gi|449522189|ref|XP_004168110.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
           sativus]
          Length = 622

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 50/80 (62%), Positives = 57/80 (71%)
 Frame = +2

Query: 491 LSLQG*DVKDIKCVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHSNAKHARDLIKI 670
           ++ +G DVKDIKCVIN+DFPSSLEDYVH                FFTH NAKHARDLIKI
Sbjct: 505 VAARGLDVKDIKCVINFDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHENAKHARDLIKI 564

Query: 671 LQEAGQVVPIPLSSLARSSG 730
           L+EAGQ+V   LS+LA SSG
Sbjct: 565 LREAGQIVTPALSALASSSG 584


>ref|XP_002866536.1| hypothetical protein ARALYDRAFT_496494 [Arabidopsis lyrata subsp.
           lyrata] gi|297312371|gb|EFH42795.1| hypothetical protein
           ARALYDRAFT_496494 [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 48/80 (60%), Positives = 57/80 (71%)
 Frame = +2

Query: 491 LSLQG*DVKDIKCVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXFFTHSNAKHARDLIKI 670
           ++ +G DVKDIKCV+NYDFP++LEDY+H                FFTH NAK AR+LIKI
Sbjct: 466 VAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELIKI 525

Query: 671 LQEAGQVVPIPLSSLARSSG 730
           LQEAGQVVP  LS+L RSSG
Sbjct: 526 LQEAGQVVPPTLSALVRSSG 545


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