BLASTX nr result

ID: Cnidium21_contig00005655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005655
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140162.1| PREDICTED: DNA polymerase epsilon subunit 3-...   162   3e-38
ref|NP_001237961.1| uncharacterized protein LOC100306382 [Glycin...   149   3e-34
ref|XP_002312821.1| predicted protein [Populus trichocarpa] gi|1...   146   2e-33
ref|XP_002275482.1| PREDICTED: nuclear transcription factor Y su...   145   4e-33
ref|XP_003540799.1| PREDICTED: uncharacterized protein LOC100819...   143   2e-32

>ref|XP_004140162.1| PREDICTED: DNA polymerase epsilon subunit 3-like [Cucumis sativus]
          Length = 160

 Score =  162 bits (410), Expect = 3e-38
 Identities = 82/150 (54%), Positives = 109/150 (72%)
 Frame = +3

Query: 45  EKIAGDADALPKSIVRRLVKQNLFQLSKNSEISIFREAIDAFSETSRIFIHYLSAAANDV 224
           +KI G  + LPK+IVRR+VK+ L Q S++ +IS+ ++++ AF E++RIFIHYLSA AND+
Sbjct: 3   KKIGGGNEELPKTIVRRVVKEKLSQCSRDQDISVNKDSLLAFCESARIFIHYLSATANDI 62

Query: 225 CKESNRQTMSAEDVFKALEDIEFPEFVAPLRASLEEFRQKTAVKRLGASNGNEAKKSKKG 404
           CKES RQT+ AEDV KALED+EFPE V PL+ASL+EFR+K A K+  AS   EAKK +K 
Sbjct: 63  CKESKRQTIKAEDVLKALEDMEFPELVRPLKASLDEFRRKNAGKKAAASREKEAKKKRKV 122

Query: 405 EPTKSETEDKQNIDDRNEDDSEANGNDSIE 494
           E    E  D ++IDD   DD++ N  D  E
Sbjct: 123 EEPTVEGTDGESIDDVGNDDNDDNDEDEDE 152


>ref|NP_001237961.1| uncharacterized protein LOC100306382 [Glycine max]
           gi|255628363|gb|ACU14526.1| unknown [Glycine max]
          Length = 161

 Score =  149 bits (376), Expect = 3e-34
 Identities = 77/146 (52%), Positives = 104/146 (71%), Gaps = 5/146 (3%)
 Frame = +3

Query: 60  DADALPKSIVRRLVKQNLFQLSKNSEISIFREAIDAFSETSRIFIHYLSAAANDVCKESN 239
           +A+ LP+SIVRR+VK  L + S++ EIS+ ++A+ AFSE+ RIFIHYLSA AND+CKES 
Sbjct: 3   EAEELPRSIVRRVVKDKLSRCSEDGEISVSKDALLAFSESGRIFIHYLSATANDICKESK 62

Query: 240 RQTMSAEDVFKALEDIEFPEFVAPLRASLEEFRQKTAVKRLGASNG--NEAKKSKKGE-- 407
           RQ ++ EDVFKALE+ EFPEF+ PL+ASLEEFR+K A K+   S G  +E +K +K E  
Sbjct: 63  RQIINVEDVFKALEETEFPEFLRPLKASLEEFRKKNAGKKAAVSKGKDDEPRKKRKLEGE 122

Query: 408 -PTKSETEDKQNIDDRNEDDSEANGN 482
            P K E  DK  + D+ ED  +   +
Sbjct: 123 SPDKGEGSDKAELSDKGEDPDKGESD 148


>ref|XP_002312821.1| predicted protein [Populus trichocarpa] gi|118484583|gb|ABK94165.1|
           unknown [Populus trichocarpa]
           gi|222849229|gb|EEE86776.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  146 bits (369), Expect = 2e-33
 Identities = 73/126 (57%), Positives = 100/126 (79%), Gaps = 2/126 (1%)
 Frame = +3

Query: 45  EKIAGDADALPKSIVRRLVKQNLFQLS-KNSEISIFREAIDAFSETSRIFIHYLSAAAND 221
           EK+  +A+ LPK+IVRR+VK  L + S ++S+I++ ++A+ AFSE++RIFIHYLSA AND
Sbjct: 4   EKVVAEAEELPKAIVRRVVKDTLSRCSPEDSDINVHKDALLAFSESARIFIHYLSATAND 63

Query: 222 VCKESNRQTMSAEDVFKALEDIEFPEFVAPLRASLEEFRQKTAVKRLGASNGNEA-KKSK 398
           +CKES RQTM+A+DVFKALEDIEFPEFV PL+ SL EF++K   K++G++   E  KK K
Sbjct: 64  ICKESKRQTMNADDVFKALEDIEFPEFVGPLKVSLSEFKRKNGGKKVGSAQNKEVQKKRK 123

Query: 399 KGEPTK 416
            G P+K
Sbjct: 124 TGGPSK 129


>ref|XP_002275482.1| PREDICTED: nuclear transcription factor Y subunit B-8 [Vitis
           vinifera] gi|296084907|emb|CBI28316.3| unnamed protein
           product [Vitis vinifera]
          Length = 193

 Score =  145 bits (366), Expect = 4e-33
 Identities = 78/146 (53%), Positives = 106/146 (72%), Gaps = 5/146 (3%)
 Frame = +3

Query: 45  EKIA-GDADALPKSIVRRLVKQNLFQLSKNSEISIFREAIDAFSETSRIFIHYLSAAAND 221
           EK+A  + + LPK+IVRR+VK  L Q S + +I I ++ + AF E++RIFIHYLSA AND
Sbjct: 2   EKVAVAEVEELPKTIVRRVVKDKLSQFSDDGDIIIHKDGLRAFCESARIFIHYLSATAND 61

Query: 222 VCKESNRQTMSAEDVFKALEDIEFPEFVAPLRASLEEFRQKTAVKRLGASNGNEAKKSKK 401
           +CKES RQT++A+DV KA+E+IEFPEFV PL+ASL+EFR+K A K+ GA+   EAKK K+
Sbjct: 62  LCKESRRQTINADDVLKAIEEIEFPEFVQPLKASLDEFRKKNAGKKAGAAKSKEAKKRKE 121

Query: 402 GEPTKSETEDKQNI--DDRN--EDDS 467
                +E +  +N   D+ N  EDDS
Sbjct: 122 DSSLNNEGDKGKNDGGDEGNEVEDDS 147


>ref|XP_003540799.1| PREDICTED: uncharacterized protein LOC100819488 [Glycine max]
          Length = 151

 Score =  143 bits (361), Expect = 2e-32
 Identities = 72/142 (50%), Positives = 102/142 (71%)
 Frame = +3

Query: 60  DADALPKSIVRRLVKQNLFQLSKNSEISIFREAIDAFSETSRIFIHYLSAAANDVCKESN 239
           +A+ LP+SI+RR+VK  L + S++ EIS+ ++ + AFSE+ RIFIHYLSA AND+CKES 
Sbjct: 3   EAEELPRSIMRRVVKYKLSRCSEDGEISVSKDGLLAFSESGRIFIHYLSATANDICKESK 62

Query: 240 RQTMSAEDVFKALEDIEFPEFVAPLRASLEEFRQKTAVKRLGASNGNEAKKSKKGEPTKS 419
           RQ ++ E+VFKALE+ EFPEFV PL+ASLEEFR+K A K++  S G E +  KK    + 
Sbjct: 63  RQIINVENVFKALEETEFPEFVCPLKASLEEFRKKNARKKVVVSKGKEDEPKKK-RKLEG 121

Query: 420 ETEDKQNIDDRNEDDSEANGND 485
           E+ DK    ++ ED+ +   +D
Sbjct: 122 ESSDKGEGSEKGEDNDKGEDSD 143


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