BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005649
         (1385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554035.1| PREDICTED: U5 small nuclear ribonucleoprotei...   615   e-173
ref|NP_001239810.1| uncharacterized protein LOC100789793 [Glycin...   614   e-173
ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotei...   610   e-172
ref|XP_002326058.1| predicted protein [Populus trichocarpa] gi|2...   605   e-171
ref|XP_003624685.1| U5 snRNP-specific protein-like factor [Medic...   602   e-170

>ref|XP_003554035.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
            isoform 1 [Glycine max] gi|356571750|ref|XP_003554036.1|
            PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa
            protein-like isoform 2 [Glycine max]
            gi|356571752|ref|XP_003554037.1| PREDICTED: U5 small
            nuclear ribonucleoprotein 40 kDa protein-like isoform 3
            [Glycine max]
          Length = 345

 Score =  615 bits (1585), Expect = e-173
 Identities = 289/345 (83%), Positives = 316/345 (91%), Gaps = 1/345 (0%)
 Frame = -2

Query: 1273 MQALHREGESSLSLMGPRPMDLSTA-HAGPHASRSNGKQRTSNLESPIMLLTGHQSAVYT 1097
            MQ    EGES+LS++GPRPM+ ST  +  P A   NGKQRTS+LESPIMLL+GHQSA+YT
Sbjct: 1    MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT 60

Query: 1096 MKFNPTGNVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLQWTTDGSQIISASADK 917
            MKFNP G+V+ASGSHDREIFLWNVHG+CKNFMVLKGHKNAVLDL WTTDG+QI+SAS DK
Sbjct: 61   MKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDK 120

Query: 916  TLRAWDVETGKQIKKMAEHSFCVNSCCPSRRGPPLAVSGSDDGTAKLWDLRQRGAIQTFP 737
            T+RAWDVETGKQIKKM EH   VNSCCPSRRGPPL VSGSDDGTAKLWD+RQRG+IQTFP
Sbjct: 121  TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 736  DKYQITAVGFSDASDKIYSGGIDNNVKVWDLRRNEVTMTLEGHQDTITGMQLSPDGSYLL 557
            DKYQITAVGFSDASDKI++GGIDN+VK+WDLR+ EVTMTL+GHQD IT MQLSPDGSYLL
Sbjct: 181  DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYLL 240

Query: 556  TNGMDSMLRIWDMRPYAPQNRCVKVLDGHQHNFEQNLLKCGWSPDGSKVTAGSADRMVYI 377
            TNGMD  L IWDMRPYAPQNRCVKVL+GHQHNFE+NLLKCGWSPDGSKVTAGS+DRMVYI
Sbjct: 241  TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 376  WDTTTRRILYKLPGHTGSVNECAFHPNEPIIGSCSSDKQIFLGEI 242
            WDTT+RRILYKLPGH GSVNEC FHPNEPIIGSCSSDKQI+LGEI
Sbjct: 301  WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345


>ref|NP_001239810.1| uncharacterized protein LOC100789793 [Glycine max]
            gi|255645285|gb|ACU23139.1| unknown [Glycine max]
          Length = 345

 Score =  614 bits (1584), Expect = e-173
 Identities = 290/345 (84%), Positives = 316/345 (91%), Gaps = 1/345 (0%)
 Frame = -2

Query: 1273 MQALHREGESSLSLMGPRPMDLSTA-HAGPHASRSNGKQRTSNLESPIMLLTGHQSAVYT 1097
            MQ    EGES+LS++GPRPM+ ST  +  P A   NGKQRTS+LESPIMLL+GHQSA+YT
Sbjct: 1    MQVFSIEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT 60

Query: 1096 MKFNPTGNVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLQWTTDGSQIISASADK 917
            MKFNP G+VIASGSHDREIFLWNVHG+CKNFMVLKGHKNAVLDL WTTDG+QI+SAS DK
Sbjct: 61   MKFNPAGSVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDK 120

Query: 916  TLRAWDVETGKQIKKMAEHSFCVNSCCPSRRGPPLAVSGSDDGTAKLWDLRQRGAIQTFP 737
            T+RAWDVETGKQIKKM EH   VNSCCPSRRGPPL VSGSDDGTAKLWD+RQRG+IQTFP
Sbjct: 121  TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 736  DKYQITAVGFSDASDKIYSGGIDNNVKVWDLRRNEVTMTLEGHQDTITGMQLSPDGSYLL 557
            DKYQITAVGFSDASDKI++GGIDN+VK+WDLR+ EVTMTL+GHQD IT MQLSPDGSYLL
Sbjct: 181  DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITDMQLSPDGSYLL 240

Query: 556  TNGMDSMLRIWDMRPYAPQNRCVKVLDGHQHNFEQNLLKCGWSPDGSKVTAGSADRMVYI 377
            TNGMD  L IWDMRPYAPQNRCVKVL+GHQHNFE+NLLKCGWSPDGSKVTAGS+DRMVYI
Sbjct: 241  TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 376  WDTTTRRILYKLPGHTGSVNECAFHPNEPIIGSCSSDKQIFLGEI 242
            WDTT+RRILYKLPGH GSVNEC FHPNEPIIGSCSSDKQI+LGEI
Sbjct: 301  WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345


>ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
            [Vitis vinifera]
          Length = 344

 Score =  610 bits (1574), Expect = e-172
 Identities = 290/338 (85%), Positives = 315/338 (93%), Gaps = 2/338 (0%)
 Frame = -2

Query: 1249 ESSLSLMGPRP-MDLSTAHA-GPHASRSNGKQRTSNLESPIMLLTGHQSAVYTMKFNPTG 1076
            E++LS++GPRP M+LS     GP A  +NGKQRTS+LESPIMLL GHQSA+YTMKFNPTG
Sbjct: 7    ENALSVVGPRPGMELSAVPCTGPRAPGANGKQRTSSLESPIMLLAGHQSAIYTMKFNPTG 66

Query: 1075 NVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLQWTTDGSQIISASADKTLRAWDV 896
             VIASGSH+REIFLW VHG+CKNFMVLKGHKNA+LDLQWTTDG+QIISAS DKTLRAWDV
Sbjct: 67   TVIASGSHEREIFLWYVHGDCKNFMVLKGHKNAILDLQWTTDGTQIISASPDKTLRAWDV 126

Query: 895  ETGKQIKKMAEHSFCVNSCCPSRRGPPLAVSGSDDGTAKLWDLRQRGAIQTFPDKYQITA 716
            ETGKQIKKMAEHS  VNSCCPSRRGPPL VSGSDDGTAKLWD+RQRGAIQTFPDKYQITA
Sbjct: 127  ETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITA 186

Query: 715  VGFSDASDKIYSGGIDNNVKVWDLRRNEVTMTLEGHQDTITGMQLSPDGSYLLTNGMDSM 536
            V FSDASDKI++GGIDN+VKVWDLRRNEVTMTL+GHQD ITGMQLSPDGSYLLTNGMD  
Sbjct: 187  VSFSDASDKIFTGGIDNDVKVWDLRRNEVTMTLQGHQDMITGMQLSPDGSYLLTNGMDCK 246

Query: 535  LRIWDMRPYAPQNRCVKVLDGHQHNFEQNLLKCGWSPDGSKVTAGSADRMVYIWDTTTRR 356
            L IWDMRPYAPQNRCVK+L+GHQHNFE+NLLKC WSPDGSKVTAGS+DRMVYIWDTT+RR
Sbjct: 247  LCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRR 306

Query: 355  ILYKLPGHTGSVNECAFHPNEPIIGSCSSDKQIFLGEI 242
            ILYKLPGHTGSVNEC FHP+EPI+GSCSSDKQI+LGEI
Sbjct: 307  ILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344


>ref|XP_002326058.1| predicted protein [Populus trichocarpa] gi|222862933|gb|EEF00440.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  605 bits (1560), Expect = e-171
 Identities = 286/345 (82%), Positives = 311/345 (90%), Gaps = 1/345 (0%)
 Frame = -2

Query: 1273 MQALHREGESSLSLMGPRPMDLSTA-HAGPHASRSNGKQRTSNLESPIMLLTGHQSAVYT 1097
            MQ + RE ES+LS+ GPRPM+ ST  + G      NGKQR S+LESPIMLLTGHQSA+YT
Sbjct: 1    MQVVPRESESALSVSGPRPMEWSTVPYTGSQGPGHNGKQRRSSLESPIMLLTGHQSAIYT 60

Query: 1096 MKFNPTGNVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLQWTTDGSQIISASADK 917
            MKFNP GNVIASGSHD+EIFLW +HGECKNFMV++GHKNAVLDL WT DGSQIISAS DK
Sbjct: 61   MKFNPAGNVIASGSHDKEIFLWYMHGECKNFMVMRGHKNAVLDLHWTADGSQIISASPDK 120

Query: 916  TLRAWDVETGKQIKKMAEHSFCVNSCCPSRRGPPLAVSGSDDGTAKLWDLRQRGAIQTFP 737
            T+RAWDVETGKQIKKMAEHS  VNSCCPSRRGPPL VSGSDDGT+KLWDLRQ+GAIQTFP
Sbjct: 121  TVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTFP 180

Query: 736  DKYQITAVGFSDASDKIYSGGIDNNVKVWDLRRNEVTMTLEGHQDTITGMQLSPDGSYLL 557
            DKYQITAV FSDASDKI++GGIDN+VKVWD+R+ EVTMTLEGHQD IT MQLSPDGSYLL
Sbjct: 181  DKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL 240

Query: 556  TNGMDSMLRIWDMRPYAPQNRCVKVLDGHQHNFEQNLLKCGWSPDGSKVTAGSADRMVYI 377
            TNGMD+ L IWDMRPYAPQNRCVK+ +GHQHNFE+NLLKC WSPDGSKVTAGSADRMVYI
Sbjct: 241  TNGMDNKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSADRMVYI 300

Query: 376  WDTTTRRILYKLPGHTGSVNECAFHPNEPIIGSCSSDKQIFLGEI 242
            WDTT+RRILYKLPGH GSVNEC FHP EPIIGSCSSDKQI+LGEI
Sbjct: 301  WDTTSRRILYKLPGHAGSVNECVFHPTEPIIGSCSSDKQIYLGEI 345


>ref|XP_003624685.1| U5 snRNP-specific protein-like factor [Medicago truncatula]
            gi|355499700|gb|AES80903.1| U5 snRNP-specific
            protein-like factor [Medicago truncatula]
          Length = 345

 Score =  602 bits (1553), Expect = e-170
 Identities = 283/345 (82%), Positives = 311/345 (90%), Gaps = 1/345 (0%)
 Frame = -2

Query: 1273 MQALHREGESSLSLMGPRPMDLSTA-HAGPHASRSNGKQRTSNLESPIMLLTGHQSAVYT 1097
            MQ    E E +LS++G +PM+ ST  +  P A   NGKQRTS+LESPIMLLTGHQSAVYT
Sbjct: 1    MQGFPGENEHALSVVGSKPMEWSTVPYNAPRAPGPNGKQRTSSLESPIMLLTGHQSAVYT 60

Query: 1096 MKFNPTGNVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLQWTTDGSQIISASADK 917
            MKFNPTG+V+ASGSHD+EIFLWNVHG+CKNFMVLKGHKNAVLDL WT+DG+QIISAS DK
Sbjct: 61   MKFNPTGSVVASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLHWTSDGTQIISASPDK 120

Query: 916  TLRAWDVETGKQIKKMAEHSFCVNSCCPSRRGPPLAVSGSDDGTAKLWDLRQRGAIQTFP 737
            TLR WD ETGKQIKKM EH   VNSCCP+RRGPPL VSGSDDGTAKLWD+RQRG+IQTFP
Sbjct: 121  TLRLWDTETGKQIKKMVEHLSYVNSCCPTRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 736  DKYQITAVGFSDASDKIYSGGIDNNVKVWDLRRNEVTMTLEGHQDTITGMQLSPDGSYLL 557
            DKYQITAV FSDASDKIY+GGIDN+VK+WDLR+ EVTMTL+GHQD IT MQLSPDGSYLL
Sbjct: 181  DKYQITAVSFSDASDKIYTGGIDNDVKIWDLRKGEVTMTLQGHQDMITSMQLSPDGSYLL 240

Query: 556  TNGMDSMLRIWDMRPYAPQNRCVKVLDGHQHNFEQNLLKCGWSPDGSKVTAGSADRMVYI 377
            TNGMD  L IWDMRPYAPQNRCVK+L+GHQHNFE+NLLKCGWSPDGSKVTAGS+DRMVYI
Sbjct: 241  TNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 376  WDTTTRRILYKLPGHTGSVNECAFHPNEPIIGSCSSDKQIFLGEI 242
            WDTT+RRILYKLPGH GSVNEC FHPNEPI+GSCSSDKQI+LGEI
Sbjct: 301  WDTTSRRILYKLPGHNGSVNECVFHPNEPIVGSCSSDKQIYLGEI 345