BLASTX nr result

ID: Cnidium21_contig00005645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005645
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis...   151   7e-35
emb|CBI34504.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002265246.1| PREDICTED: F-box protein SKIP8 [Vitis vinifera]   150   1e-34
ref|XP_002509987.1| conserved hypothetical protein [Ricinus comm...   150   2e-34
gb|AFK35844.1| unknown [Medicago truncatula]                          149   4e-34

>ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis sativus]
           gi|449506211|ref|XP_004162683.1| PREDICTED: F-box
           protein SKIP8-like [Cucumis sativus]
          Length = 313

 Score =  151 bits (382), Expect = 7e-35
 Identities = 66/97 (68%), Positives = 79/97 (81%)
 Frame = +3

Query: 3   MGLLWFNADFVKCIHASGEKYSGYAAVMQSWQQAFSWEQSVDFQIRDVRARVHSDMAWVM 182
           M   W NAD+VKCIHASGE +SGY AV+QSWQ AF+WEQ ++FQ+RDVRARV +DMAWV 
Sbjct: 206 MSRFWLNADYVKCIHASGEFFSGYNAVVQSWQVAFNWEQGINFQVRDVRARVLTDMAWVS 265

Query: 183 LQANVDMDIRLYNVTNAFEFHNGRWYMVHHHSSAALV 293
           ++  VDMD   +NVTN +EFHNGRWYMVHHHSS  L+
Sbjct: 266 MKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLI 302


>emb|CBI34504.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  150 bits (379), Expect = 1e-34
 Identities = 64/96 (66%), Positives = 80/96 (83%)
 Frame = +3

Query: 3   MGLLWFNADFVKCIHASGEKYSGYAAVMQSWQQAFSWEQSVDFQIRDVRARVHSDMAWVM 182
           M  LWFNAD+VKC+HASGE ++GY AV++SWQ AF+W+Q VDFQ+RDVRARV +DMAWV 
Sbjct: 219 MSRLWFNADYVKCVHASGELFTGYNAVIESWQLAFNWDQGVDFQVRDVRARVLTDMAWVT 278

Query: 183 LQANVDMDIRLYNVTNAFEFHNGRWYMVHHHSSAAL 290
           ++  VDM+   +NVTN FEFHNGRW+MVHHHSS  +
Sbjct: 279 MKTFVDMETGPFNVTNVFEFHNGRWFMVHHHSSVLI 314


>ref|XP_002265246.1| PREDICTED: F-box protein SKIP8 [Vitis vinifera]
          Length = 307

 Score =  150 bits (379), Expect = 1e-34
 Identities = 64/96 (66%), Positives = 80/96 (83%)
 Frame = +3

Query: 3   MGLLWFNADFVKCIHASGEKYSGYAAVMQSWQQAFSWEQSVDFQIRDVRARVHSDMAWVM 182
           M  LWFNAD+VKC+HASGE ++GY AV++SWQ AF+W+Q VDFQ+RDVRARV +DMAWV 
Sbjct: 201 MSRLWFNADYVKCVHASGELFTGYNAVIESWQLAFNWDQGVDFQVRDVRARVLTDMAWVT 260

Query: 183 LQANVDMDIRLYNVTNAFEFHNGRWYMVHHHSSAAL 290
           ++  VDM+   +NVTN FEFHNGRW+MVHHHSS  +
Sbjct: 261 MKTFVDMETGPFNVTNVFEFHNGRWFMVHHHSSVLI 296


>ref|XP_002509987.1| conserved hypothetical protein [Ricinus communis]
           gi|223549886|gb|EEF51374.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score =  150 bits (378), Expect = 2e-34
 Identities = 67/106 (63%), Positives = 80/106 (75%)
 Frame = +3

Query: 3   MGLLWFNADFVKCIHASGEKYSGYAAVMQSWQQAFSWEQSVDFQIRDVRARVHSDMAWVM 182
           M  +W NAD+VKCIHASGE +SGY AVMQSWQ AF+WEQ ++FQ+RDVRARV +DMAWV 
Sbjct: 195 MSRIWLNADYVKCIHASGELFSGYNAVMQSWQLAFNWEQGLEFQVRDVRARVLTDMAWVT 254

Query: 183 LQANVDMDIRLYNVTNAFEFHNGRWYMVHHHSSAALVHNGAVQMIL 320
           ++   DMD   + VTN FEFHN RWYMVHHHSS  L+     Q I+
Sbjct: 255 MKTYFDMDTGPFTVTNIFEFHNDRWYMVHHHSSVMLIDGDVDQQIV 300


>gb|AFK35844.1| unknown [Medicago truncatula]
          Length = 284

 Score =  149 bits (375), Expect = 4e-34
 Identities = 67/103 (65%), Positives = 80/103 (77%)
 Frame = +3

Query: 3   MGLLWFNADFVKCIHASGEKYSGYAAVMQSWQQAFSWEQSVDFQIRDVRARVHSDMAWVM 182
           M   W NAD+VKC+HASGE +SGY  VMQSWQ  F+W+Q ++FQ+RDVRARV +DMAWV 
Sbjct: 179 MSRFWLNADYVKCVHASGELFSGYNGVMQSWQLVFNWDQGLNFQVRDVRARVLTDMAWVT 238

Query: 183 LQANVDMDIRLYNVTNAFEFHNGRWYMVHHHSSAALVHNGAVQ 311
           ++  VDMD   +NVTN FEFHNGRWYMVHHHSS   V NG V+
Sbjct: 239 MKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSS---VMNGDVE 278


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