BLASTX nr result

ID: Cnidium21_contig00005614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005614
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543027.1| PREDICTED: protein E6-like isoform 1 [Glycin...    56   3e-06
gb|ACU23362.1| unknown [Glycine max]                                   55   6e-06

>ref|XP_003543027.1| PREDICTED: protein E6-like isoform 1 [Glycine max]
           gi|356549293|ref|XP_003543028.1| PREDICTED: protein
           E6-like isoform 2 [Glycine max]
          Length = 272

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
 Frame = +3

Query: 78  VHARDSQFFSKVT---SNNIPKEVLPTKEQEPLNKPEQEPNFVPXXXXXXXXXXXXXXXX 248
           + ARDSQFFSKVT    N++ +  LP KE   +NKPEQ+P F+P                
Sbjct: 22  ISARDSQFFSKVTHFDKNSVKETELPNKEAPEVNKPEQQPPFIPETENSYGLYGHHDEYN 81

Query: 249 XXXLSPT--TENLPYKTQTENPYNK 317
               + T  T   PYKT+ EN  NK
Sbjct: 82  QVPSTTTNPTSYHPYKTEFENSNNK 106


>gb|ACU23362.1| unknown [Glycine max]
          Length = 270

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/83 (39%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
 Frame = +3

Query: 78  VHARDSQFFSKVT---SNNIPKEVLPTKEQEPLNKPEQEPNFVPXXXXXXXXXXXXXXXX 248
           + ARDSQFFSKVT    +N     LP KE   +NKPEQ+P F+P                
Sbjct: 22  ITARDSQFFSKVTHFDKDNAKVTELPNKEAPEVNKPEQQPPFIPETENSYGLYGHHDESN 81

Query: 249 XXXLSPTTENLPYKTQTENPYNK 317
               +  T   PYKT+ EN  NK
Sbjct: 82  QVPSTTPTSYHPYKTKFENSNNK 104


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