BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005590
         (1308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   209   1e-51
emb|CBI27869.3| unnamed protein product [Vitis vinifera]              209   1e-51
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...   200   8e-49
ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|2...   197   4e-48
ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arab...   196   8e-48

>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  209 bits (533), Expect = 1e-51
 Identities = 100/144 (69%), Positives = 114/144 (79%)
 Frame = +3

Query: 3   VELSNTPQLLLLQVRNSTYKLPGGRLRPGESDVEGLKRKLTNKLSVKCDGIVPDWEIGEC 182
           VEL   P LLLLQV+NS +KLPGGRLRPGES++ GLKRKL+ KLSV  DG   DWE+GEC
Sbjct: 140 VELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGEC 199

Query: 183 LGRWWRVGFETLLLPYLPPNVGSPKECRKIFLVKLPGRQKFTVPKTHKLLVVPLSQLHEN 362
           LG WWR  FETLL PYLPPNV +PKEC K+FLVKLP  +KF VPK  KLL +PL QLHEN
Sbjct: 200 LGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHEN 259

Query: 363 HKIYGPVISGVPQLLSKFPIEIVN 434
            K YGP+I+GVPQLLSKF   I++
Sbjct: 260 DKTYGPIIAGVPQLLSKFSFNIID 283


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  209 bits (533), Expect = 1e-51
 Identities = 100/144 (69%), Positives = 114/144 (79%)
 Frame = +3

Query: 3   VELSNTPQLLLLQVRNSTYKLPGGRLRPGESDVEGLKRKLTNKLSVKCDGIVPDWEIGEC 182
           VEL   P LLLLQV+NS +KLPGGRLRPGES++ GLKRKL+ KLSV  DG   DWE+GEC
Sbjct: 147 VELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGEC 206

Query: 183 LGRWWRVGFETLLLPYLPPNVGSPKECRKIFLVKLPGRQKFTVPKTHKLLVVPLSQLHEN 362
           LG WWR  FETLL PYLPPNV +PKEC K+FLVKLP  +KF VPK  KLL +PL QLHEN
Sbjct: 207 LGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHEN 266

Query: 363 HKIYGPVISGVPQLLSKFPIEIVN 434
            K YGP+I+GVPQLLSKF   I++
Sbjct: 267 DKTYGPIIAGVPQLLSKFSFNIID 290


>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score =  200 bits (508), Expect = 8e-49
 Identities = 96/144 (66%), Positives = 112/144 (77%)
 Frame = +3

Query: 3   VELSNTPQLLLLQVRNSTYKLPGGRLRPGESDVEGLKRKLTNKLSVKCDGIVPDWEIGEC 182
           VEL   P LLLLQ++NS +KLPGGR+RPGESD+ GLKRKL+ KLS   D    DWE+GEC
Sbjct: 72  VELFKHPHLLLLQIKNSIFKLPGGRIRPGESDIGGLKRKLSRKLSNNQDQT--DWEVGEC 129

Query: 183 LGRWWRVGFETLLLPYLPPNVGSPKECRKIFLVKLPGRQKFTVPKTHKLLVVPLSQLHEN 362
           LG WWR  FETLL PYLPPN+ +PKEC K+FLV+LP   KF VPK  KLL VPLSQ+H+N
Sbjct: 130 LGMWWRPDFETLLYPYLPPNLKTPKECTKLFLVRLPTSCKFIVPKNLKLLAVPLSQIHDN 189

Query: 363 HKIYGPVISGVPQLLSKFPIEIVN 434
           HK YG +ISGVPQLLSK+   I+N
Sbjct: 190 HKTYGGIISGVPQLLSKYSFRIIN 213


>ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|222854251|gb|EEE91798.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  197 bits (502), Expect = 4e-48
 Identities = 96/142 (67%), Positives = 110/142 (77%)
 Frame = +3

Query: 3   VELSNTPQLLLLQVRNSTYKLPGGRLRPGESDVEGLKRKLTNKLSVKCDGIVPDWEIGEC 182
           VEL   P LLLLQVRN+ +KLPGGRLRPGESD++GL+RKL+  LSV  D     WE+G+C
Sbjct: 68  VELFKHPHLLLLQVRNAFFKLPGGRLRPGESDIDGLQRKLSRMLSVNEDE-TDHWEVGDC 126

Query: 183 LGRWWRVGFETLLLPYLPPNVGSPKECRKIFLVKLPGRQKFTVPKTHKLLVVPLSQLHEN 362
           LG WWR  FETLL PYLPPN+  PKEC K+++VKLP  +KF VPK  KLL VPL Q+HEN
Sbjct: 127 LGMWWRSDFETLLYPYLPPNLKVPKECTKLYVVKLPASRKFIVPKNLKLLAVPLCQVHEN 186

Query: 363 HKIYGPVISGVPQLLSKFPIEI 428
           HK YGPVISGVPQLLSKF   I
Sbjct: 187 HKTYGPVISGVPQLLSKFSFNI 208


>ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
           lyrata] gi|297313222|gb|EFH43645.1| hypothetical protein
           ARALYDRAFT_491776 [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score =  196 bits (499), Expect = 8e-48
 Identities = 92/143 (64%), Positives = 111/143 (77%)
 Frame = +3

Query: 3   VELSNTPQLLLLQVRNSTYKLPGGRLRPGESDVEGLKRKLTNKLSVKCDGIVPDWEIGEC 182
           VEL   P +LLLQ RNS +KLPGGRLRPGESD+EG+KRKL +KLSV  + +VP  E+GEC
Sbjct: 79  VELLKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGVKRKLASKLSVNENVVVPGLEVGEC 138

Query: 183 LGRWWRVGFETLLLPYLPPNVGSPKECRKIFLVKLPGRQKFTVPKTHKLLVVPLSQLHEN 362
           +G WWR  FETL+ P+LPPNV  PKEC K+FLV+LP  Q+F VPK  KLL VPL QLHEN
Sbjct: 139 IGMWWRPNFETLMYPFLPPNVKHPKECTKLFLVRLPVNQQFVVPKNFKLLAVPLCQLHEN 198

Query: 363 HKIYGPVISGVPQLLSKFPIEIV 431
            K YGP+IS +P+LLSKF   ++
Sbjct: 199 EKTYGPIISQIPKLLSKFSFNMM 221