BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005587
         (1409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH03531.1| class II knotted-like homeobox protein [Prunus pe...   179   8e-45
ref|XP_002285407.2| PREDICTED: homeobox protein knotted-1-like 3...   179   8e-45
emb|CBI21101.3| unnamed protein product [Vitis vinifera]              179   8e-45
gb|AEC04754.1| knotted-like homeobox KNOX5 [Fragaria vesca]           177   2e-44
gb|ADL36705.1| HD domain class transcription factor [Malus x dom...   178   5e-44

>gb|ABH03531.1| class II knotted-like homeobox protein [Prunus persica]
           gi|215983122|gb|ACJ71731.1| class II knotted-like
           homeobox transcription factor [Prunus persica]
          Length = 448

 Score =  179 bits (453), Expect(2) = 8e-45
 Identities = 99/139 (71%), Positives = 101/139 (72%)
 Frame = -1

Query: 731 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATXXXXXXXXXXXXXXXXXVSPG 552
           QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE                          
Sbjct: 254 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE-------------------------- 287

Query: 551 EGTGATMSXXXXXXXXXDANLFDASMEGGDNMGFGPLVPTESERSLMERVRQELKHELKQ 372
            GTGATMS         DANLFD SMEG D+MGFGPL+PTESERSLMERVRQELKHELKQ
Sbjct: 288 -GTGATMSDDEDDQVDSDANLFDGSMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQ 346

Query: 371 GYKEKIVDIREEILRKRRA 315
           GYKEKIVDIREEILRKRRA
Sbjct: 347 GYKEKIVDIREEILRKRRA 365



 Score = 29.6 bits (65), Expect(2) = 8e-45
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 234 GKLPGDTTSVLKA 196
           GKLPGDTTSVLKA
Sbjct: 366 GKLPGDTTSVLKA 378



 Score = 84.3 bits (207), Expect(2) = 2e-24
 Identities = 59/159 (37%), Positives = 79/159 (49%), Gaps = 56/159 (35%)
 Frame = -2

Query: 1390 PTWLNTAISRNQYR-----------------DSSNFLNLQTTPNSAESTQPSSNQWM--- 1271
            P WLNTA+ RN                     +SNFLNL  T + + ++Q +SNQW+   
Sbjct: 50   PNWLNTALLRNYTNADANNNHNNSPNNNGGGGASNFLNLHVTASDSTTSQ-ASNQWLSQP 108

Query: 1270 -----HRN------DEGGIIPDAIMASESAEE----------------VQRG-------- 1196
                 HRN      D   I  D+++A+  + +                V+ G        
Sbjct: 109  HRPILHRNHSDVIDDVTAIAGDSMIAATISHDSADLKPDSSLNKTDIVVESGGGGGDGGM 168

Query: 1195 -DWQNAKWKGELLAHPLYDQLLAAHVACLRIATPVDQLP 1082
             +WQNA+ K E+LAHPLY+ LL+AHVACLRIATPVDQLP
Sbjct: 169  INWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLP 207



 Score = 55.8 bits (133), Expect(2) = 2e-24
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = -3

Query: 990 DQLPRINAQLTQSQQVVAKYSGLGNVTAAVEDKELDQFMTH 868
           DQLPRI+AQL QSQ VVAKYS LG+     +DKELDQFM H
Sbjct: 204 DQLPRIDAQLAQSQNVVAKYSALGHGMVG-DDKELDQFMRH 243


>ref|XP_002285407.2| PREDICTED: homeobox protein knotted-1-like 3-like [Vitis vinifera]
          Length = 415

 Score =  179 bits (453), Expect(2) = 8e-45
 Identities = 99/139 (71%), Positives = 101/139 (72%)
 Frame = -1

Query: 731 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATXXXXXXXXXXXXXXXXXVSPG 552
           QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE                          
Sbjct: 233 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE-------------------------- 266

Query: 551 EGTGATMSXXXXXXXXXDANLFDASMEGGDNMGFGPLVPTESERSLMERVRQELKHELKQ 372
            GTGATMS         DANLFD S+EG D+MGFGPLVPTESERSLMERVRQELKHELKQ
Sbjct: 267 -GTGATMSDDEEDQIDSDANLFDGSLEGADSMGFGPLVPTESERSLMERVRQELKHELKQ 325

Query: 371 GYKEKIVDIREEILRKRRA 315
           GYKEKIVDIREEILRKRRA
Sbjct: 326 GYKEKIVDIREEILRKRRA 344



 Score = 29.6 bits (65), Expect(2) = 8e-45
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 234 GKLPGDTTSVLKA 196
           GKLPGDTTSVLKA
Sbjct: 345 GKLPGDTTSVLKA 357



 Score = 80.5 bits (197), Expect(2) = 3e-23
 Identities = 51/123 (41%), Positives = 67/123 (54%), Gaps = 20/123 (16%)
 Frame = -2

Query: 1390 PTWLNTAIS---RNQYRDSS--NFLNLQTTPNSAESTQPSSNQW-----------MHRND 1259
            PTWLN AI    ++QY D++  NFL   T    A   + S++             +  N+
Sbjct: 61   PTWLNHAIQLRQQSQYSDNNFLNFLQRNTNDVVAAGDEVSNDSIIATAMSHESADLANNN 120

Query: 1258 EGGIIPDAIMASESAEEVQRGD----WQNAKWKGELLAHPLYDQLLAAHVACLRIATPVD 1091
                      +   AE  + GD    WQNA+ K E+LAHPLY+QLL++HVACLRIATPVD
Sbjct: 121  SNNSNVKVNNSGNGAEIAESGDVAVNWQNARQKAEILAHPLYEQLLSSHVACLRIATPVD 180

Query: 1090 QLP 1082
            QLP
Sbjct: 181  QLP 183



 Score = 55.8 bits (133), Expect(2) = 3e-23
 Identities = 28/43 (65%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
 Frame = -3

Query: 990 DQLPRINAQLTQSQQVVAKYSGLGNVTAAV--EDKELDQFMTH 868
           DQLPRI+AQL QSQ VV+KYS LG+  + +  ++KELDQFMTH
Sbjct: 180 DQLPRIDAQLAQSQHVVSKYSALGHGNSQMLGDEKELDQFMTH 222


>emb|CBI21101.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score =  179 bits (453), Expect(2) = 8e-45
 Identities = 99/139 (71%), Positives = 101/139 (72%)
 Frame = -1

Query: 731 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATXXXXXXXXXXXXXXXXXVSPG 552
           QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE                          
Sbjct: 25  QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE-------------------------- 58

Query: 551 EGTGATMSXXXXXXXXXDANLFDASMEGGDNMGFGPLVPTESERSLMERVRQELKHELKQ 372
            GTGATMS         DANLFD S+EG D+MGFGPLVPTESERSLMERVRQELKHELKQ
Sbjct: 59  -GTGATMSDDEEDQIDSDANLFDGSLEGADSMGFGPLVPTESERSLMERVRQELKHELKQ 117

Query: 371 GYKEKIVDIREEILRKRRA 315
           GYKEKIVDIREEILRKRRA
Sbjct: 118 GYKEKIVDIREEILRKRRA 136



 Score = 29.6 bits (65), Expect(2) = 8e-45
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 234 GKLPGDTTSVLKA 196
           GKLPGDTTSVLKA
Sbjct: 137 GKLPGDTTSVLKA 149


>gb|AEC04754.1| knotted-like homeobox KNOX5 [Fragaria vesca]
          Length = 368

 Score =  177 bits (450), Expect(2) = 2e-44
 Identities = 98/139 (70%), Positives = 101/139 (72%)
 Frame = -1

Query: 731 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATXXXXXXXXXXXXXXXXXVSPG 552
           QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE                          
Sbjct: 118 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE-------------------------- 151

Query: 551 EGTGATMSXXXXXXXXXDANLFDASMEGGDNMGFGPLVPTESERSLMERVRQELKHELKQ 372
            GTGATMS         DANLFD SM+G D+MGFGPL+PTESERSLMERVRQELKHELKQ
Sbjct: 152 -GTGATMSDDDEEQVDSDANLFDGSMDGHDSMGFGPLIPTESERSLMERVRQELKHELKQ 210

Query: 371 GYKEKIVDIREEILRKRRA 315
           GYKEKIVDIREEILRKRRA
Sbjct: 211 GYKEKIVDIREEILRKRRA 229



 Score = 29.6 bits (65), Expect(2) = 2e-44
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 234 GKLPGDTTSVLKA 196
           GKLPGDTTSVLKA
Sbjct: 230 GKLPGDTTSVLKA 242



 Score = 71.2 bits (173), Expect(2) = 3e-20
 Identities = 38/76 (50%), Positives = 49/76 (64%)
 Frame = -2

Query: 1309 SAESTQPSSNQWMHRNDEGGIIPDAIMASESAEEVQRGDWQNAKWKGELLAHPLYDQLLA 1130
            S +S    ++  ++   EGG+      A ES       +WQNA+ K E+LAHPLY+ LL+
Sbjct: 2    SHDSADMKNDAALNNKSEGGV------AVESGGGDGVMNWQNARHKAEILAHPLYEPLLS 55

Query: 1129 AHVACLRIATPVDQLP 1082
            AHVACLRIATPVDQLP
Sbjct: 56   AHVACLRIATPVDQLP 71



 Score = 55.1 bits (131), Expect(2) = 3e-20
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = -3

Query: 990 DQLPRINAQLTQSQQVVAKYSGLGNVTAAVEDKELDQFMTH 868
           DQLPRI+AQL QSQ VVAKYSG+ +     +DKELDQFM H
Sbjct: 68  DQLPRIDAQLAQSQNVVAKYSGMSHGMVG-DDKELDQFMRH 107


>gb|ADL36705.1| HD domain class transcription factor [Malus x domestica]
          Length = 437

 Score =  178 bits (451), Expect(2) = 5e-44
 Identities = 98/139 (70%), Positives = 101/139 (72%)
 Frame = -1

Query: 731 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATXXXXXXXXXXXXXXXXXVSPG 552
           QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE                          
Sbjct: 255 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE-------------------------- 288

Query: 551 EGTGATMSXXXXXXXXXDANLFDASMEGGDNMGFGPLVPTESERSLMERVRQELKHELKQ 372
            GTGATMS         DANLFD SMEG D+MGFGPL+PTESERSLMERVRQELKHELKQ
Sbjct: 289 -GTGATMSDDEDDQVDSDANLFDGSMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQ 347

Query: 371 GYKEKIVDIREEILRKRRA 315
           GYKEKIVDIREEI+RKRRA
Sbjct: 348 GYKEKIVDIREEIMRKRRA 366



 Score = 27.7 bits (60), Expect(2) = 5e-44
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -3

Query: 234 GKLPGDTTSVLKA 196
           GKLPG+TTSVLKA
Sbjct: 367 GKLPGNTTSVLKA 379



 Score = 83.2 bits (204), Expect(2) = 6e-24
 Identities = 56/161 (34%), Positives = 73/161 (45%), Gaps = 58/161 (36%)
 Frame = -2

Query: 1390 PTWLNTAISRNQYR----------------DSSNFLNLQTTPNSAESTQPSSNQWM---- 1271
            P WLN+A+ RN                    +SNFLNL  T + + ++Q +SNQW+    
Sbjct: 49   PNWLNSALLRNFTNADTNPTNSNNANNNGGGASNFLNLHVTASDSAASQ-ASNQWLSQSH 107

Query: 1270 ----HRN----------------------------------DEGGIIPDAIMASESAEEV 1205
                HRN                                   EGG++   I       + 
Sbjct: 108  RPILHRNHSDVIDDVTVAGDSMIAAMSHDSADLKPDSNLNKSEGGVVESGIPGGGGGGDG 167

Query: 1204 QRGDWQNAKWKGELLAHPLYDQLLAAHVACLRIATPVDQLP 1082
               +WQNA+ K E+LAHPLY+ LL+AHVACLRIATPVDQLP
Sbjct: 168  GVMNWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLP 208



 Score = 55.5 bits (132), Expect(2) = 6e-24
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = -3

Query: 990 DQLPRINAQLTQSQQVVAKYSGLGNVTAAVEDKELDQFMTH 868
           DQLPRI+AQL  SQ VVAKYS LGN     +DKELDQFM H
Sbjct: 205 DQLPRIDAQLAXSQNVVAKYSALGNGMVG-DDKELDQFMRH 244