BLASTX nr result

ID: Cnidium21_contig00005580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005580
         (1053 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307110.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65
emb|CAN76030.1| hypothetical protein VITISV_029132 [Vitis vinifera]   253   6e-65
ref|XP_002281520.1| PREDICTED: trafficking protein particle comp...   253   7e-65
ref|XP_002281478.1| PREDICTED: trafficking protein particle comp...   252   9e-65
emb|CAN78542.1| hypothetical protein VITISV_007618 [Vitis vinifera]   252   9e-65

>ref|XP_002307110.1| predicted protein [Populus trichocarpa] gi|222856559|gb|EEE94106.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  254 bits (649), Expect = 2e-65
 Identities = 127/155 (81%), Positives = 138/155 (89%), Gaps = 4/155 (2%)
 Frame = +1

Query: 175 LLSKLGYIQMQYGDLDGAKATFGLIEKQVDERVE----LRNLVGRNKALVYLVGKDYVSA 342
           LLSKLGY+QMQ GDLDGA  +FG +EK   E  E    LRNLV RNKALVYLVGKDY+SA
Sbjct: 171 LLSKLGYVQMQIGDLDGANVSFGKVEKMSSESEENESGLRNLVSRNKALVYLVGKDYLSA 230

Query: 343 VREYDECIERDGNDVVAINNKALCLMYLRDLSDSIKVLESALERIPTKALNETLVVNLCS 522
           VREYDECIERDG DVVAINNKA+CLMYLRDLSDSIKVLE++LER+PT ALNETLVVNLCS
Sbjct: 231 VREYDECIERDGMDVVAINNKAICLMYLRDLSDSIKVLENSLERVPTVALNETLVVNLCS 290

Query: 523 MYELAYVNHADIKKTLSNWIARVAPDDFDSSCTRI 627
           MYELAYVNH+D K+TLSNWIARVAPDDFDSSCTR+
Sbjct: 291 MYELAYVNHSDTKRTLSNWIARVAPDDFDSSCTRV 325


>emb|CAN76030.1| hypothetical protein VITISV_029132 [Vitis vinifera]
          Length = 373

 Score =  253 bits (646), Expect = 6e-65
 Identities = 128/158 (81%), Positives = 141/158 (89%), Gaps = 7/158 (4%)
 Frame = +1

Query: 175 LLSKLGYIQMQYGDLDGAKATFGLIEKQVDER-------VELRNLVGRNKALVYLVGKDY 333
           L+SKLG IQ+Q GDL+GAKA+F L+EK   E        +E +NLV RNKALVYLVGKDY
Sbjct: 216 LVSKLGCIQLQIGDLEGAKASFELVEKMGKEERLGSLSEIEFKNLVNRNKALVYLVGKDY 275

Query: 334 VSAVREYDECIERDGNDVVAINNKALCLMYLRDLSDSIKVLESALERIPTKALNETLVVN 513
           VSAVREY+ECIERDG+DVVAINNKALCLMYLRDLSDSIKVLE+ALER+PT ALNETLVVN
Sbjct: 276 VSAVREYEECIERDGSDVVAINNKALCLMYLRDLSDSIKVLENALERVPTXALNETLVVN 335

Query: 514 LCSMYELAYVNHADIKKTLSNWIARVAPDDFDSSCTRI 627
           LCSMYELAYVNH+DIK+TLSNWIARVAPDDFDSSCTRI
Sbjct: 336 LCSMYELAYVNHSDIKRTLSNWIARVAPDDFDSSCTRI 373


>ref|XP_002281520.1| PREDICTED: trafficking protein particle complex subunit 12-like
           [Vitis vinifera]
          Length = 373

 Score =  253 bits (645), Expect = 7e-65
 Identities = 128/158 (81%), Positives = 141/158 (89%), Gaps = 7/158 (4%)
 Frame = +1

Query: 175 LLSKLGYIQMQYGDLDGAKATFGLIEKQVDER-------VELRNLVGRNKALVYLVGKDY 333
           L+SKLG IQ+Q GDL+GAKA+F L+EK   E        +E +NLV RNKALVYLVGKDY
Sbjct: 216 LVSKLGCIQLQIGDLEGAKASFELVEKMGKEERLGSLSEIEFKNLVNRNKALVYLVGKDY 275

Query: 334 VSAVREYDECIERDGNDVVAINNKALCLMYLRDLSDSIKVLESALERIPTKALNETLVVN 513
           VSAVREY+ECIERDG+DVVAINNKALCLMYLRDLSDSIKVLE+ALER+PT ALNETLVVN
Sbjct: 276 VSAVREYEECIERDGSDVVAINNKALCLMYLRDLSDSIKVLENALERVPTVALNETLVVN 335

Query: 514 LCSMYELAYVNHADIKKTLSNWIARVAPDDFDSSCTRI 627
           LCSMYELAYVNH+DIK+TLSNWIARVAPDDFDSSCTRI
Sbjct: 336 LCSMYELAYVNHSDIKRTLSNWIARVAPDDFDSSCTRI 373


>ref|XP_002281478.1| PREDICTED: trafficking protein particle complex subunit 12-like
           [Vitis vinifera]
          Length = 373

 Score =  252 bits (644), Expect = 9e-65
 Identities = 128/158 (81%), Positives = 141/158 (89%), Gaps = 7/158 (4%)
 Frame = +1

Query: 175 LLSKLGYIQMQYGDLDGAKATFGLIEKQVDER-------VELRNLVGRNKALVYLVGKDY 333
           L+SKLG IQ+Q GDL+GAKA+F L+EK   E        +E +NLV RNKALVYLVGKDY
Sbjct: 216 LVSKLGCIQLQIGDLEGAKASFELVEKMGKEERLGSLSEIEFKNLVNRNKALVYLVGKDY 275

Query: 334 VSAVREYDECIERDGNDVVAINNKALCLMYLRDLSDSIKVLESALERIPTKALNETLVVN 513
           VSAVREY+ECIERDG+DVVAINNKALCLMYLRDLSDSIKVLE+ALER+PT ALNETLVVN
Sbjct: 276 VSAVREYEECIERDGSDVVAINNKALCLMYLRDLSDSIKVLENALERVPTIALNETLVVN 335

Query: 514 LCSMYELAYVNHADIKKTLSNWIARVAPDDFDSSCTRI 627
           LCSMYELAYVNH+DIK+TLSNWIARVAPDDFDSSCTRI
Sbjct: 336 LCSMYELAYVNHSDIKRTLSNWIARVAPDDFDSSCTRI 373


>emb|CAN78542.1| hypothetical protein VITISV_007618 [Vitis vinifera]
          Length = 373

 Score =  252 bits (644), Expect = 9e-65
 Identities = 128/158 (81%), Positives = 141/158 (89%), Gaps = 7/158 (4%)
 Frame = +1

Query: 175 LLSKLGYIQMQYGDLDGAKATFGLIEKQVDER-------VELRNLVGRNKALVYLVGKDY 333
           L+SKLG IQ+Q GDL+GAKA+F L+EK   E        +E +NLV RNKALVYLVGKDY
Sbjct: 216 LVSKLGCIQLQIGDLEGAKASFELVEKMGKEERLGSLSEIEFKNLVNRNKALVYLVGKDY 275

Query: 334 VSAVREYDECIERDGNDVVAINNKALCLMYLRDLSDSIKVLESALERIPTKALNETLVVN 513
           VSAVREY+ECIERDG+DVVAINNKALCLMYLRDLSDSIKVLE+ALER+PT ALNETLVVN
Sbjct: 276 VSAVREYEECIERDGSDVVAINNKALCLMYLRDLSDSIKVLENALERVPTIALNETLVVN 335

Query: 514 LCSMYELAYVNHADIKKTLSNWIARVAPDDFDSSCTRI 627
           LCSMYELAYVNH+DIK+TLSNWIARVAPDDFDSSCTRI
Sbjct: 336 LCSMYELAYVNHSDIKRTLSNWIARVAPDDFDSSCTRI 373


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