BLASTX nr result
ID: Cnidium21_contig00005572
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00005572 (658 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleop... 110 3e-22 ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleop... 106 4e-21 ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleop... 102 5e-20 ref|XP_003626597.1| RNA-binding protein [Medicago truncatula] gi... 101 1e-19 gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif);... 101 1e-19 >ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine max] Length = 483 Score = 110 bits (274), Expect = 3e-22 Identities = 63/124 (50%), Positives = 69/124 (55%), Gaps = 2/124 (1%) Frame = -2 Query: 657 SDRKSDGANIHNSGLVXXXXXXXXXXXXXXXXXXPVGAGYGVSAGYQQPMIYGRGPMPAG 478 +D+K DG +N GL +GAGYGV+AGYQQPMIYGRGPMPAG Sbjct: 360 ADKKPDGGYAYNPGLHPNHVPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPAG 419 Query: 477 MQMVPMVLPDGRIGYVLXXXXXXXXXXXPRRNDXXXXXXXXXXXXXXGAS--DVANRGRR 304 MQMVPM+LPDGRIGYVL PRRND GAS D NR RR Sbjct: 420 MQMVPMMLPDGRIGYVLQQPGVQVPPARPRRNDRSNGPSGQPGRGGGGASGNDEGNRSRR 479 Query: 303 YRPY 292 YRPY Sbjct: 480 YRPY 483 >ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine max] Length = 483 Score = 106 bits (264), Expect = 4e-21 Identities = 62/124 (50%), Positives = 67/124 (54%), Gaps = 2/124 (1%) Frame = -2 Query: 657 SDRKSDGANIHNSGLVXXXXXXXXXXXXXXXXXXPVGAGYGVSAGYQQPMIYGRGPMPAG 478 +D+K DG +N GL +GAGYGV+AGYQQPMIYGRGPMPAG Sbjct: 360 ADKKPDGGYAYNPGLHPNHIPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPAG 419 Query: 477 MQMVPMVLPDGRIGYVLXXXXXXXXXXXPRRNDXXXXXXXXXXXXXXGAS--DVANRGRR 304 MQMVPMVLPDGRIGYVL PRR D G S D NR RR Sbjct: 420 MQMVPMVLPDGRIGYVLQQPGVQVPATRPRRIDRSNGPSGQPGRGGGGGSGNDEGNRSRR 479 Query: 303 YRPY 292 YRPY Sbjct: 480 YRPY 483 >ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis sativus] gi|449477982|ref|XP_004155183.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis sativus] Length = 481 Score = 102 bits (255), Expect = 5e-20 Identities = 60/123 (48%), Positives = 67/123 (54%), Gaps = 1/123 (0%) Frame = -2 Query: 657 SDRKSDGANIHNSGLVXXXXXXXXXXXXXXXXXXPVGAGYGVSAGYQQPMIYGRGPMPAG 478 SD+KSDGA H SG +G GYGV+AG+ QPMIYGRGPMPAG Sbjct: 360 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPAG 418 Query: 477 MQMVPMVLPDGRIGYVLXXXXXXXXXXXPRRND-XXXXXXXXXXXXXXGASDVANRGRRY 301 MQMVPMVLPDGRIGYVL RR++ +SD NRGRRY Sbjct: 419 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 478 Query: 300 RPY 292 RPY Sbjct: 479 RPY 481 >ref|XP_003626597.1| RNA-binding protein [Medicago truncatula] gi|355501612|gb|AES82815.1| RNA-binding protein [Medicago truncatula] Length = 479 Score = 101 bits (251), Expect = 1e-19 Identities = 61/124 (49%), Positives = 67/124 (54%), Gaps = 2/124 (1%) Frame = -2 Query: 657 SDRKSDGANIHNSGLVXXXXXXXXXXXXXXXXXXPVGAGYGVSAG--YQQPMIYGRGPMP 484 +++K DG +N GL VGAGYGV+A YQQPMIYGRGPMP Sbjct: 359 AEKKPDGGYAYNPGLHPNHLPHPGYGNFSGNLYGSVGAGYGVAAAAAYQQPMIYGRGPMP 418 Query: 483 AGMQMVPMVLPDGRIGYVLXXXXXXXXXXXPRRNDXXXXXXXXXXXXXXGASDVANRGRR 304 AGMQMVPMVLPDGRIGYVL PRRND G +D NR RR Sbjct: 419 AGMQMVPMVLPDGRIGYVLQQPGVQVPGPRPRRND---RGNGPGGRGGGGGNDDGNRNRR 475 Query: 303 YRPY 292 YRPY Sbjct: 476 YRPY 479 >gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding EF-hand [Medicago truncatula] Length = 559 Score = 101 bits (251), Expect = 1e-19 Identities = 61/124 (49%), Positives = 67/124 (54%), Gaps = 2/124 (1%) Frame = -2 Query: 657 SDRKSDGANIHNSGLVXXXXXXXXXXXXXXXXXXPVGAGYGVSAG--YQQPMIYGRGPMP 484 +++K DG +N GL VGAGYGV+A YQQPMIYGRGPMP Sbjct: 439 AEKKPDGGYAYNPGLHPNHLPHPGYGNFSGNLYGSVGAGYGVAAAAAYQQPMIYGRGPMP 498 Query: 483 AGMQMVPMVLPDGRIGYVLXXXXXXXXXXXPRRNDXXXXXXXXXXXXXXGASDVANRGRR 304 AGMQMVPMVLPDGRIGYVL PRRND G +D NR RR Sbjct: 499 AGMQMVPMVLPDGRIGYVLQQPGVQVPGPRPRRND---RGNGPGGRGGGGGNDDGNRNRR 555 Query: 303 YRPY 292 YRPY Sbjct: 556 YRPY 559