BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005572
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleop...   110   3e-22
ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleop...   106   4e-21
ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleop...   102   5e-20
ref|XP_003626597.1| RNA-binding protein [Medicago truncatula] gi...   101   1e-19
gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif);...   101   1e-19

>ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
           max]
          Length = 483

 Score =  110 bits (274), Expect = 3e-22
 Identities = 63/124 (50%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
 Frame = -2

Query: 657 SDRKSDGANIHNSGLVXXXXXXXXXXXXXXXXXXPVGAGYGVSAGYQQPMIYGRGPMPAG 478
           +D+K DG   +N GL                    +GAGYGV+AGYQQPMIYGRGPMPAG
Sbjct: 360 ADKKPDGGYAYNPGLHPNHVPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPAG 419

Query: 477 MQMVPMVLPDGRIGYVLXXXXXXXXXXXPRRNDXXXXXXXXXXXXXXGAS--DVANRGRR 304
           MQMVPM+LPDGRIGYVL           PRRND              GAS  D  NR RR
Sbjct: 420 MQMVPMMLPDGRIGYVLQQPGVQVPPARPRRNDRSNGPSGQPGRGGGGASGNDEGNRSRR 479

Query: 303 YRPY 292
           YRPY
Sbjct: 480 YRPY 483


>ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
           max]
          Length = 483

 Score =  106 bits (264), Expect = 4e-21
 Identities = 62/124 (50%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = -2

Query: 657 SDRKSDGANIHNSGLVXXXXXXXXXXXXXXXXXXPVGAGYGVSAGYQQPMIYGRGPMPAG 478
           +D+K DG   +N GL                    +GAGYGV+AGYQQPMIYGRGPMPAG
Sbjct: 360 ADKKPDGGYAYNPGLHPNHIPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPAG 419

Query: 477 MQMVPMVLPDGRIGYVLXXXXXXXXXXXPRRNDXXXXXXXXXXXXXXGAS--DVANRGRR 304
           MQMVPMVLPDGRIGYVL           PRR D              G S  D  NR RR
Sbjct: 420 MQMVPMVLPDGRIGYVLQQPGVQVPATRPRRIDRSNGPSGQPGRGGGGGSGNDEGNRSRR 479

Query: 303 YRPY 292
           YRPY
Sbjct: 480 YRPY 483


>ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
           sativus] gi|449477982|ref|XP_004155183.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
           sativus]
          Length = 481

 Score =  102 bits (255), Expect = 5e-20
 Identities = 60/123 (48%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
 Frame = -2

Query: 657 SDRKSDGANIHNSGLVXXXXXXXXXXXXXXXXXXPVGAGYGVSAGYQQPMIYGRGPMPAG 478
           SD+KSDGA  H SG                     +G GYGV+AG+ QPMIYGRGPMPAG
Sbjct: 360 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPAG 418

Query: 477 MQMVPMVLPDGRIGYVLXXXXXXXXXXXPRRND-XXXXXXXXXXXXXXGASDVANRGRRY 301
           MQMVPMVLPDGRIGYVL            RR++                +SD  NRGRRY
Sbjct: 419 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 478

Query: 300 RPY 292
           RPY
Sbjct: 479 RPY 481


>ref|XP_003626597.1| RNA-binding protein [Medicago truncatula]
           gi|355501612|gb|AES82815.1| RNA-binding protein
           [Medicago truncatula]
          Length = 479

 Score =  101 bits (251), Expect = 1e-19
 Identities = 61/124 (49%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = -2

Query: 657 SDRKSDGANIHNSGLVXXXXXXXXXXXXXXXXXXPVGAGYGVSAG--YQQPMIYGRGPMP 484
           +++K DG   +N GL                    VGAGYGV+A   YQQPMIYGRGPMP
Sbjct: 359 AEKKPDGGYAYNPGLHPNHLPHPGYGNFSGNLYGSVGAGYGVAAAAAYQQPMIYGRGPMP 418

Query: 483 AGMQMVPMVLPDGRIGYVLXXXXXXXXXXXPRRNDXXXXXXXXXXXXXXGASDVANRGRR 304
           AGMQMVPMVLPDGRIGYVL           PRRND              G +D  NR RR
Sbjct: 419 AGMQMVPMVLPDGRIGYVLQQPGVQVPGPRPRRND---RGNGPGGRGGGGGNDDGNRNRR 475

Query: 303 YRPY 292
           YRPY
Sbjct: 476 YRPY 479


>gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding
           EF-hand [Medicago truncatula]
          Length = 559

 Score =  101 bits (251), Expect = 1e-19
 Identities = 61/124 (49%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = -2

Query: 657 SDRKSDGANIHNSGLVXXXXXXXXXXXXXXXXXXPVGAGYGVSAG--YQQPMIYGRGPMP 484
           +++K DG   +N GL                    VGAGYGV+A   YQQPMIYGRGPMP
Sbjct: 439 AEKKPDGGYAYNPGLHPNHLPHPGYGNFSGNLYGSVGAGYGVAAAAAYQQPMIYGRGPMP 498

Query: 483 AGMQMVPMVLPDGRIGYVLXXXXXXXXXXXPRRNDXXXXXXXXXXXXXXGASDVANRGRR 304
           AGMQMVPMVLPDGRIGYVL           PRRND              G +D  NR RR
Sbjct: 499 AGMQMVPMVLPDGRIGYVLQQPGVQVPGPRPRRND---RGNGPGGRGGGGGNDDGNRNRR 555

Query: 303 YRPY 292
           YRPY
Sbjct: 556 YRPY 559