BLASTX nr result

ID: Cnidium21_contig00005562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005562
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]...   166   3e-39
ref|XP_002308852.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-...   155   3e-36
gb|AFK45895.1| unknown [Medicago truncatula]                          154   9e-36
ref|XP_002323207.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]
           gi|223532913|gb|EEF34681.1| 3-5 exonuclease, putative
           [Ricinus communis]
          Length = 211

 Score =  166 bits (419), Expect = 3e-39
 Identities = 79/153 (51%), Positives = 108/153 (70%), Gaps = 2/153 (1%)
 Frame = +2

Query: 92  MAVTIFDHDLPYDTHNLYDISFFSTPIQTLLTHDASHVTSWLRDVT--RSHSSPNLIGFD 265
           M + I D++L  DTHNLYDI+FF+  I TL+TH  S V  WL +     + + P ++G D
Sbjct: 1   MTLGIRDYELINDTHNLYDITFFTDQIHTLVTHSPSLVEQWLIETQGQNNQTQPTIVGLD 60

Query: 266 VEWRPNFQRNQDNRIATIQLSTGTNCLVYQIIHADTIPRSLINFLGNCEYTFVGVGIGAD 445
           VEWRPNF R+ +N +AT+QL  G+ CL+YQ+IH+  IP+SL +FL N  Y F GVGI +D
Sbjct: 61  VEWRPNFSRHIENPVATLQLCIGSRCLIYQLIHSPRIPQSLFDFLKNSSYVFAGVGIESD 120

Query: 446 VEKLVDDYGITVRKFVDLRPVAASVCGIRELKN 544
           VEKLV+DYG++V   ++LR VAA   G++ELKN
Sbjct: 121 VEKLVEDYGLSVGNVMELRRVAAESLGVKELKN 153


>ref|XP_002308852.1| predicted protein [Populus trichocarpa] gi|222854828|gb|EEE92375.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  159 bits (402), Expect = 3e-37
 Identities = 79/159 (49%), Positives = 108/159 (67%), Gaps = 8/159 (5%)
 Frame = +2

Query: 92  MAVTIFDHDLPYDTHNLYDISFFSTPIQTLLTHDASHVTSWLRDVTRS-HSSPN------ 250
           MA++I DH LPY+THNLYD++FF   I TL+TH  S V +W+ +  +  H + N      
Sbjct: 1   MAISIEDHQLPYNTHNLYDVNFFDDKIHTLVTHTPSFVNTWIAETQQKLHQNNNPADHPL 60

Query: 251 LIGFDVEWRPNFQRNQDNRIATIQLSTGTNCLVYQIIHADT-IPRSLINFLGNCEYTFVG 427
           L+G D+EWRPN  R  +N +AT+QLSTG +CL++Q++H  T IP+SL +FL N  YTFVG
Sbjct: 61  LVGLDIEWRPNRTRQIENPVATLQLSTGKDCLIFQLLHCPTGIPQSLYDFLSNKNYTFVG 120

Query: 428 VGIGADVEKLVDDYGITVRKFVDLRPVAASVCGIRELKN 544
           VGI  DVEKLV+ Y +++   VDLR +AA   G  + KN
Sbjct: 121 VGIEGDVEKLVEGYDVSMGNAVDLRVLAAEKLGAEQWKN 159


>ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
          Length = 238

 Score =  155 bits (393), Expect = 3e-36
 Identities = 83/169 (49%), Positives = 107/169 (63%), Gaps = 8/169 (4%)
 Frame = +2

Query: 59  PIFSATTTNNNMA--VTIFDHDLPYDTHNLYDISFFST-PIQTLLTHDASHVTSWLRDVT 229
           P  S+TTT   +   +++ DH LPYDTHNLYD+SF +T  I TLLT D S V SW+  V 
Sbjct: 12  PRSSSTTTTTPVVAPISVVDHGLPYDTHNLYDVSFNNTHTIYTLLTSDPSLVDSWISTVL 71

Query: 230 RSHSSPN-----LIGFDVEWRPNFQRNQDNRIATIQLSTGTNCLVYQIIHADTIPRSLIN 394
           R H   +      +G D+EWRPN QRN  N +AT+QL     CLV+QI+H+ +IP SL++
Sbjct: 72  RDHQHQHQQRVLTVGLDIEWRPNTQRNMQNPVATLQLCVAERCLVFQILHSPSIPPSLVS 131

Query: 395 FLGNCEYTFVGVGIGADVEKLVDDYGITVRKFVDLRPVAASVCGIRELK 541
           FL +   TFVGVGI  D+EKL++DY + V    DLR  AA   G  ELK
Sbjct: 132 FLADPNITFVGVGIQEDMEKLLEDYNLNVANVRDLRSFAAERLGDLELK 180


>gb|AFK45895.1| unknown [Medicago truncatula]
          Length = 236

 Score =  154 bits (389), Expect = 9e-36
 Identities = 80/164 (48%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
 Frame = +2

Query: 50  ILTPIFSATTTNNNMAVTIFDHDLPYDTHNLYDISFFST-PIQTLLTHDASHVTSWLRDV 226
           I  PI +   T +   +T+FD+ LPYDTHN Y I+  +T  IQTLLT    HV SWL + 
Sbjct: 13  IYMPIPNPNPTPSPFNITLFDNHLPYDTHNTYSITIDTTLTIQTLLTCSPIHVESWLLET 72

Query: 227 TRSHSSPNLIGFDVEWRPNFQRNQDNRIATIQLSTGTNCLVYQIIHADTIPRSLINFLGN 406
                SP +IG D+EWRPN QR Q N  AT+QL T   CL++Q+IH+ +IP  L  FL N
Sbjct: 73  --QSLSPAIIGLDIEWRPNSQRGQSNPAATLQLYTNNRCLIFQLIHSPSIPTFLFTFLSN 130

Query: 407 CEYTFVGVGIGADVEKLVDDYGITVRKFVDLRPVAASVCGIREL 538
               FVGVGI +D+EK+++DY +TV  +VDLR +AA V   R+L
Sbjct: 131 PNNRFVGVGIESDIEKIIEDYNLTVANYVDLRNLAADVLEDRDL 174


>ref|XP_002323207.1| predicted protein [Populus trichocarpa] gi|222867837|gb|EEF04968.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/159 (47%), Positives = 106/159 (66%), Gaps = 8/159 (5%)
 Frame = +2

Query: 92  MAVTIFDHDLPYDTHNLYDISFFSTPIQTLLTHDASHVTSWLRDV------TRSHS-SPN 250
           MA++I +H LPY+THNLYD+ FF   I TL+TH +S V +W+ +         +H+  P 
Sbjct: 1   MAISIENHHLPYETHNLYDVKFFDDRIHTLVTHTSSFVNTWIAETQQKLLQNNNHAHRPL 60

Query: 251 LIGFDVEWRPNFQRNQDNRIATIQLSTGTNCLVYQIIHADT-IPRSLINFLGNCEYTFVG 427
           ++G DVEWRPN  R  +N +AT+QLS G +CL++Q++H  T IP+SL +FL +  YTFVG
Sbjct: 61  IVGLDVEWRPNRFRRIENPVATLQLSAGNDCLIFQLLHCPTGIPQSLHDFLSDMTYTFVG 120

Query: 428 VGIGADVEKLVDDYGITVRKFVDLRPVAASVCGIRELKN 544
           VGI  DV+KL +DY ++V   VDLR +AA   G    KN
Sbjct: 121 VGIEGDVKKLTEDYELSVGNAVDLRGLAAEKLGDSRWKN 159


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