BLASTX nr result

ID: Cnidium21_contig00005543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005543
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm...   324   1e-86
emb|CBI20795.3| unnamed protein product [Vitis vinifera]              310   1e-82
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...   310   1e-82
ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-li...   302   5e-80
ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-li...   302   5e-80

>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
           gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
           Full=Retinoblastoma-related protein
           gi|223530511|gb|EEF32393.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1020

 Score =  324 bits (830), Expect = 1e-86
 Identities = 161/227 (70%), Positives = 183/227 (80%)
 Frame = +2

Query: 2   LEAKELQANFVHMSILSKYYKRAYHELFLAKDTNIDKQSAVGLGSDYHRFGWLLFLALRA 181
           LEAKELQANFVH+SILS++YKRAY ELFL  D N+DKQSA    SDYHRFGWLLFLALR 
Sbjct: 148 LEAKELQANFVHLSILSRHYKRAYRELFLTSDANVDKQSATAYMSDYHRFGWLLFLALRV 207

Query: 182 HAFSRFKDLVTCTNGLVSILAILIIHVPAHLRKFTIDDSSRFIKKGDKGVDIIASLCKMY 361
           HAFSRFKDLVTCTNGLVS+LAILIIHVP   R F ++DS RF+KKGDKGVD++ASLC  Y
Sbjct: 208 HAFSRFKDLVTCTNGLVSVLAILIIHVPVRFRNFNLNDSQRFVKKGDKGVDLLASLCNKY 267

Query: 362 ETSEDELRKTMEKTNKLIESILKKKPCLASECKVENLDNISTDGLIYFDGXXXXXXXXXX 541
           +TSEDELRKTMEKTN LI  ILKKKP +ASE K ENLDNI+TDGLIY++           
Sbjct: 268 DTSEDELRKTMEKTNNLIADILKKKPHMASEYKNENLDNINTDGLIYYEDLMEESSLRSS 327

Query: 542 XXXXXKDYEDAIHNTGDLDERVFMDAEDSVLGSNSLSGGAINISGTK 682
                KDYEDAI   G+LDERVF++ EDS+LGS SLSGGAI+++GTK
Sbjct: 328 LDILEKDYEDAIRCKGELDERVFINEEDSLLGSGSLSGGAISVTGTK 374


>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score =  310 bits (795), Expect = 1e-82
 Identities = 157/231 (67%), Positives = 183/231 (79%), Gaps = 4/231 (1%)
 Frame = +2

Query: 2   LEAKELQANFVHMSILSKYYKRAYHELFLAKDTNIDKQSAV----GLGSDYHRFGWLLFL 169
           LEAKELQANFVH+SILSKYYKRAY E F    +N+DKQS+V    G  SDYHRFGWLLFL
Sbjct: 139 LEAKELQANFVHLSILSKYYKRAYLEFFSTSGSNLDKQSSVISASGYVSDYHRFGWLLFL 198

Query: 170 ALRAHAFSRFKDLVTCTNGLVSILAILIIHVPAHLRKFTIDDSSRFIKKGDKGVDIIASL 349
           ALR HAFSRFKDLVTCTNGLVSILAILI+HVP   R FTI++  RF+KKG+KG+D++ASL
Sbjct: 199 ALRVHAFSRFKDLVTCTNGLVSILAILILHVPISFRSFTINNYPRFVKKGNKGMDLLASL 258

Query: 350 CKMYETSEDELRKTMEKTNKLIESILKKKPCLASECKVENLDNISTDGLIYFDGXXXXXX 529
           C +YETSEDE+RKTME+TNK+I  ILKKKPCLASECK ENL +I  DGL+YF+       
Sbjct: 259 CDIYETSEDEVRKTMEQTNKVIVDILKKKPCLASECKSENLASIDPDGLVYFEDLMDESS 318

Query: 530 XXXXXXXXXKDYEDAIHNTGDLDERVFMDAEDSVLGSNSLSGGAINISGTK 682
                    KDY+ AI N G+LDERVF++ EDS+LGS SLSGGA++ISG K
Sbjct: 319 LSSSINILEKDYDAAIRNKGELDERVFINGEDSLLGSGSLSGGAMSISGAK 369


>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
           gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
           Full=Retinoblastoma-related protein
           gi|359392418|gb|AEV45768.1| RBR protein [Vitis
           pseudoreticulata]
          Length = 1007

 Score =  310 bits (795), Expect = 1e-82
 Identities = 157/231 (67%), Positives = 183/231 (79%), Gaps = 4/231 (1%)
 Frame = +2

Query: 2   LEAKELQANFVHMSILSKYYKRAYHELFLAKDTNIDKQSAV----GLGSDYHRFGWLLFL 169
           LEAKELQANFVH+SILSKYYKRAY E F    +N+DKQS+V    G  SDYHRFGWLLFL
Sbjct: 140 LEAKELQANFVHLSILSKYYKRAYLEFFSTSGSNLDKQSSVISASGYVSDYHRFGWLLFL 199

Query: 170 ALRAHAFSRFKDLVTCTNGLVSILAILIIHVPAHLRKFTIDDSSRFIKKGDKGVDIIASL 349
           ALR HAFSRFKDLVTCTNGLVSILAILI+HVP   R FTI++  RF+KKG+KG+D++ASL
Sbjct: 200 ALRVHAFSRFKDLVTCTNGLVSILAILILHVPISFRSFTINNYPRFVKKGNKGMDLLASL 259

Query: 350 CKMYETSEDELRKTMEKTNKLIESILKKKPCLASECKVENLDNISTDGLIYFDGXXXXXX 529
           C +YETSEDE+RKTME+TNK+I  ILKKKPCLASECK ENL +I  DGL+YF+       
Sbjct: 260 CDIYETSEDEVRKTMEQTNKVIVDILKKKPCLASECKSENLASIDPDGLVYFEDLMDESS 319

Query: 530 XXXXXXXXXKDYEDAIHNTGDLDERVFMDAEDSVLGSNSLSGGAINISGTK 682
                    KDY+ AI N G+LDERVF++ EDS+LGS SLSGGA++ISG K
Sbjct: 320 LSSSINILEKDYDAAIRNKGELDERVFINGEDSLLGSGSLSGGAMSISGAK 370


>ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1125

 Score =  302 bits (773), Expect = 5e-80
 Identities = 153/232 (65%), Positives = 177/232 (76%), Gaps = 5/232 (2%)
 Frame = +2

Query: 2   LEAKELQANFVHMSILSKYYKRAYHELFLAKDTNIDKQSAV----GLGSDYHRFGWLLFL 169
           LEAKELQANFVH+S+LSKYYKR Y E F   D N++KQSA+    G  SDYHRFGWLLFL
Sbjct: 249 LEAKELQANFVHLSLLSKYYKRVYREFFSTNDANVEKQSAISCPTGYLSDYHRFGWLLFL 308

Query: 170 ALRAHAFSRFKDLVTCTNGLVSILAILIIHVPAHLRKFTIDDSSRFIKKGDKGVDIIASL 349
           ALR HAFSRFKDLVTCTNGLVSILAILI+HVP H R F I DS R +KKG KGVD++ SL
Sbjct: 309 ALRVHAFSRFKDLVTCTNGLVSILAILILHVPVHFRNFNILDSERLVKKGGKGVDLLGSL 368

Query: 350 CKMYETSEDELRKTMEKTNKLIESILKKKPCLASECKVENLDNISTDGLIYFDGXXXXXX 529
           C +Y+TSE+ELR+ MEK N LIE ILKKKP LASEC  ++L+NI T+GLIYF+G      
Sbjct: 369 CDVYDTSEEELREVMEKANGLIEDILKKKPRLASECNSKSLENIDTEGLIYFEGLMEEPS 428

Query: 530 XXXXXXXXXKDYEDAIHNTGD-LDERVFMDAEDSVLGSNSLSGGAINISGTK 682
                    KDYEDAIHN G+ LDERVF++ EDS+LGS SLS GA+ + G K
Sbjct: 429 LSANLEILEKDYEDAIHNKGEQLDERVFVNDEDSLLGSGSLSAGAVTMGGIK 480


>ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1024

 Score =  302 bits (773), Expect = 5e-80
 Identities = 153/232 (65%), Positives = 177/232 (76%), Gaps = 5/232 (2%)
 Frame = +2

Query: 2   LEAKELQANFVHMSILSKYYKRAYHELFLAKDTNIDKQSAV----GLGSDYHRFGWLLFL 169
           LEAKELQANFVH+S+LSKYYKR Y E F   D N++KQSA+    G  SDYHRFGWLLFL
Sbjct: 148 LEAKELQANFVHLSLLSKYYKRVYREFFSTNDANVEKQSAISCPTGYLSDYHRFGWLLFL 207

Query: 170 ALRAHAFSRFKDLVTCTNGLVSILAILIIHVPAHLRKFTIDDSSRFIKKGDKGVDIIASL 349
           ALR HAFSRFKDLVTCTNGLVSILAILI+HVP H R F I DS R +KKG KGVD++ SL
Sbjct: 208 ALRVHAFSRFKDLVTCTNGLVSILAILILHVPVHFRNFNILDSERLVKKGGKGVDLLGSL 267

Query: 350 CKMYETSEDELRKTMEKTNKLIESILKKKPCLASECKVENLDNISTDGLIYFDGXXXXXX 529
           C +Y+TSE+ELR+ MEK N LIE ILKKKP LASEC  ++L+NI T+GLIYF+G      
Sbjct: 268 CDVYDTSEEELREVMEKANGLIEDILKKKPRLASECNSKSLENIDTEGLIYFEGLMEEPS 327

Query: 530 XXXXXXXXXKDYEDAIHNTGD-LDERVFMDAEDSVLGSNSLSGGAINISGTK 682
                    KDYEDAIHN G+ LDERVF++ EDS+LGS SLS GA+ + G K
Sbjct: 328 LSASLEILEKDYEDAIHNKGEQLDERVFVNDEDSLLGSGSLSAGAVTMGGIK 379


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