BLASTX nr result

ID: Cnidium21_contig00005533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005533
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297847.1| predicted protein [Populus trichocarpa] gi|1...   207   5e-52
ref|XP_002276841.1| PREDICTED: nuclear transport factor 2 isofor...   205   4e-51
ref|XP_002514900.1| nuclear transport factor, putative [Ricinus ...   203   1e-50
ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [...   202   3e-50
ref|XP_004152114.1| PREDICTED: nuclear transport factor 2-like [...   202   3e-50

>ref|XP_002297847.1| predicted protein [Populus trichocarpa] gi|118483889|gb|ABK93835.1|
           unknown [Populus trichocarpa]
           gi|222845105|gb|EEE82652.1| predicted protein [Populus
           trichocarpa]
          Length = 123

 Score =  207 bits (528), Expect = 5e-52
 Identities = 105/142 (73%), Positives = 111/142 (78%)
 Frame = -1

Query: 428 MDPDAVAKAFVEHYYTTFDMDRSGLANLYQDNSMLTFEGQKIQGSTNIVSKLVSLPFTQC 249
           MDPD VAKAFVEHYY+TFD +R+GLANLYQD SMLTFEGQK QGS NIV+KL++LPF QC
Sbjct: 1   MDPDQVAKAFVEHYYSTFDANRAGLANLYQDGSMLTFEGQKTQGSQNIVAKLIALPFQQC 60

Query: 248 KHTITTVDCQPSGPXXXXXXXXXXXXXXXXXXXXXXMLVFVSGILQLAGEQHGLKFSQMF 69
           KH ITTVDCQPSGP                      MLVFVSG LQLAGEQH LKFSQMF
Sbjct: 61  KHLITTVDCQPSGP-------------------AGGMLVFVSGNLQLAGEQHALKFSQMF 101

Query: 68  HLMPTPQGSFYVFNDIFRLNYA 3
           HLMPTPQGSFYVFNDIFRLNYA
Sbjct: 102 HLMPTPQGSFYVFNDIFRLNYA 123


>ref|XP_002276841.1| PREDICTED: nuclear transport factor 2 isoform 1 [Vitis vinifera]
           gi|147821626|emb|CAN70316.1| hypothetical protein
           VITISV_001831 [Vitis vinifera]
          Length = 123

 Score =  205 bits (521), Expect = 4e-51
 Identities = 104/142 (73%), Positives = 112/142 (78%)
 Frame = -1

Query: 428 MDPDAVAKAFVEHYYTTFDMDRSGLANLYQDNSMLTFEGQKIQGSTNIVSKLVSLPFTQC 249
           MDPDAVAKAFVEHYY+TFD +R+ LANLYQ++SMLTFEGQKIQGS NIV+KL SLPF QC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRANLANLYQESSMLTFEGQKIQGSPNIVAKLTSLPFQQC 60

Query: 248 KHTITTVDCQPSGPXXXXXXXXXXXXXXXXXXXXXXMLVFVSGILQLAGEQHGLKFSQMF 69
           +H+ITTVDCQPSGP                      MLVFVSG LQLAGEQH LKFSQMF
Sbjct: 61  QHSITTVDCQPSGP-------------------AGGMLVFVSGNLQLAGEQHALKFSQMF 101

Query: 68  HLMPTPQGSFYVFNDIFRLNYA 3
           HLMPTPQGSFYV NDIFRLNYA
Sbjct: 102 HLMPTPQGSFYVLNDIFRLNYA 123


>ref|XP_002514900.1| nuclear transport factor, putative [Ricinus communis]
           gi|223545951|gb|EEF47454.1| nuclear transport factor,
           putative [Ricinus communis]
          Length = 123

 Score =  203 bits (516), Expect = 1e-50
 Identities = 102/142 (71%), Positives = 111/142 (78%)
 Frame = -1

Query: 428 MDPDAVAKAFVEHYYTTFDMDRSGLANLYQDNSMLTFEGQKIQGSTNIVSKLVSLPFTQC 249
           MDPDAVAKAFVEHYYTTFD +R+GLANLYQ+ SMLTFEGQKIQG+ N+V+KL SLPF QC
Sbjct: 1   MDPDAVAKAFVEHYYTTFDANRAGLANLYQEASMLTFEGQKIQGAQNVVAKLTSLPFQQC 60

Query: 248 KHTITTVDCQPSGPXXXXXXXXXXXXXXXXXXXXXXMLVFVSGILQLAGEQHGLKFSQMF 69
           +H+ITTVDCQPSGP                      MLVFVSG L+L GEQH LKFSQMF
Sbjct: 61  QHSITTVDCQPSGP-------------------AGGMLVFVSGNLKLTGEQHALKFSQMF 101

Query: 68  HLMPTPQGSFYVFNDIFRLNYA 3
           HLMPTPQGSFYV NDIFRLNYA
Sbjct: 102 HLMPTPQGSFYVLNDIFRLNYA 123


>ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus]
          Length = 173

 Score =  202 bits (513), Expect = 3e-50
 Identities = 102/142 (71%), Positives = 111/142 (78%)
 Frame = -1

Query: 428 MDPDAVAKAFVEHYYTTFDMDRSGLANLYQDNSMLTFEGQKIQGSTNIVSKLVSLPFTQC 249
           MDPDAVAKAFV+HYY+TFD +R+ L NLYQDNSMLTFEGQKIQGS NIV+KL SLPF QC
Sbjct: 51  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQC 110

Query: 248 KHTITTVDCQPSGPXXXXXXXXXXXXXXXXXXXXXXMLVFVSGILQLAGEQHGLKFSQMF 69
           KH+++TVDCQPSGP                      MLVFVSG LQLAGEQH LKFSQMF
Sbjct: 111 KHSVSTVDCQPSGP-------------------TGGMLVFVSGNLQLAGEQHALKFSQMF 151

Query: 68  HLMPTPQGSFYVFNDIFRLNYA 3
           HLMPTPQGSF+V NDIFRLNYA
Sbjct: 152 HLMPTPQGSFFVQNDIFRLNYA 173


>ref|XP_004152114.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus]
          Length = 173

 Score =  202 bits (513), Expect = 3e-50
 Identities = 102/142 (71%), Positives = 111/142 (78%)
 Frame = -1

Query: 428 MDPDAVAKAFVEHYYTTFDMDRSGLANLYQDNSMLTFEGQKIQGSTNIVSKLVSLPFTQC 249
           MDPDAVAKAFV+HYY+TFD +R+ L NLYQDNSMLTFEGQKIQGS NIV+KL SLPF QC
Sbjct: 51  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQC 110

Query: 248 KHTITTVDCQPSGPXXXXXXXXXXXXXXXXXXXXXXMLVFVSGILQLAGEQHGLKFSQMF 69
           KH+++TVDCQPSGP                      MLVFVSG LQLAGEQH LKFSQMF
Sbjct: 111 KHSVSTVDCQPSGP-------------------TGGMLVFVSGNLQLAGEQHALKFSQMF 151

Query: 68  HLMPTPQGSFYVFNDIFRLNYA 3
           HLMPTPQGSF+V NDIFRLNYA
Sbjct: 152 HLMPTPQGSFFVQNDIFRLNYA 173


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