BLASTX nr result

ID: Cnidium21_contig00005521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005521
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71265.1| 60S ribosomal protein L12A [Hevea brasiliensis]        180   3e-43
ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis ...   180   3e-43
ref|XP_002274407.1| PREDICTED: 60S ribosomal protein L12 [Vitis ...   180   3e-43
ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [V...   177   2e-42
ref|XP_002519537.1| 60S ribosomal protein L12, putative [Ricinus...   177   3e-42

>gb|ADR71265.1| 60S ribosomal protein L12A [Hevea brasiliensis]
          Length = 166

 Score =  180 bits (456), Expect = 3e-43
 Identities = 100/166 (60%), Positives = 107/166 (64%), Gaps = 9/166 (5%)
 Frame = -1

Query: 702 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 523
           MPPKFDPSQVVDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 522 VKLTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMA------ 361
           VKLTV                                               +A      
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIAKVMRPR 120

Query: 360 ---KELTGTVKEILGTCVSVGCTVDGKNPKDLQEEIDDDQVEIPQD 232
              K+L+GTVKEILGTCVSVGCTVDGKNPKDLQ+EI D +VE+P D
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKNPKDLQQEITDGEVEVPLD 166


>ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera]
           gi|147835636|emb|CAN66258.1| hypothetical protein
           VITISV_001237 [Vitis vinifera]
          Length = 166

 Score =  180 bits (456), Expect = 3e-43
 Identities = 101/166 (60%), Positives = 107/166 (64%), Gaps = 9/166 (5%)
 Frame = -1

Query: 702 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 523
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 522 VKLTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMA------ 361
           VKLTV                                               +A      
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120

Query: 360 ---KELTGTVKEILGTCVSVGCTVDGKNPKDLQEEIDDDQVEIPQD 232
              K+L+G+VKEILGTCVSVGCTVDGK+PKDLQ+EI D  VEIPQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPQD 166


>ref|XP_002274407.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera]
           gi|147785001|emb|CAN75443.1| hypothetical protein
           VITISV_019658 [Vitis vinifera]
          Length = 166

 Score =  180 bits (456), Expect = 3e-43
 Identities = 100/166 (60%), Positives = 107/166 (64%), Gaps = 9/166 (5%)
 Frame = -1

Query: 702 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 523
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 522 VKLTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMA------ 361
           VKLTV                                               +A      
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 360 ---KELTGTVKEILGTCVSVGCTVDGKNPKDLQEEIDDDQVEIPQD 232
              K+L+GTVKEILGTCVSVGCTVDGK+PKDLQ+EI D  VE+P+D
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEVPED 166


>ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [Vitis vinifera]
          Length = 166

 Score =  177 bits (449), Expect = 2e-42
 Identities = 100/166 (60%), Positives = 106/166 (63%), Gaps = 9/166 (5%)
 Frame = -1

Query: 702 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 523
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 522 VKLTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMA------ 361
           VKLTV                                               +A      
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120

Query: 360 ---KELTGTVKEILGTCVSVGCTVDGKNPKDLQEEIDDDQVEIPQD 232
              K+L+G+VKEILGTCVSVGCTVDGK+PKDLQ+EI D  VEIP D
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166


>ref|XP_002519537.1| 60S ribosomal protein L12, putative [Ricinus communis]
           gi|223541400|gb|EEF42951.1| 60S ribosomal protein L12,
           putative [Ricinus communis]
          Length = 166

 Score =  177 bits (448), Expect = 3e-42
 Identities = 100/166 (60%), Positives = 105/166 (63%), Gaps = 9/166 (5%)
 Frame = -1

Query: 702 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 523
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 522 VKLTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMA------ 361
           VKLTV                                               +A      
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDNVIEIAKVMKPR 120

Query: 360 ---KELTGTVKEILGTCVSVGCTVDGKNPKDLQEEIDDDQVEIPQD 232
              K+L+GTVKEILGTCVSVGCTVD K+PKDLQ+EI D  VEIP D
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDSKDPKDLQQEITDGDVEIPLD 166


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