BLASTX nr result

ID: Cnidium21_contig00005493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005493
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536004.1| PREDICTED: probable glutamyl-tRNA synthetase...   255   2e-66
ref|XP_003591273.1| Bifunctional aminoacyl-tRNA synthetase [Medi...   252   3e-65
ref|XP_002278667.2| PREDICTED: probable glutamyl-tRNA synthetase...   250   1e-64
emb|CBI39688.3| unnamed protein product [Vitis vinifera]              250   1e-64
emb|CAN76587.1| hypothetical protein VITISV_020288 [Vitis vinifera]   250   1e-64

>ref|XP_003536004.1| PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like
            [Glycine max]
          Length = 733

 Score =  255 bits (652), Expect = 2e-66
 Identities = 125/164 (76%), Positives = 145/164 (88%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3    TINKKIIDHVCPRHTAVSAER-VLLMLSDGPDEPFVRIIPRHKKYPGAGDKATTYTKSVW 179
            TINKKIID VCPRHTAV A+R VLL L+DGP++PFVRIIPRHKKY  AGDKATTYTK +W
Sbjct: 521  TINKKIIDPVCPRHTAVIADRRVLLTLTDGPEKPFVRIIPRHKKYEAAGDKATTYTKRIW 580

Query: 180  IDLADAKSISPGEEITLMDWGNAIVKEISKDEGGSIKHLTGVLNLGGSVKTTKLKLTWLP 359
            +DLADA S+S GEE+TLMDWGNAIVKEI KD+ G+I  L+GVL+L GSVKTTKLKLTWLP
Sbjct: 581  LDLADAVSLSAGEEVTLMDWGNAIVKEIEKDQDGNIIGLSGVLHLEGSVKTTKLKLTWLP 640

Query: 360  DTYELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAFG 491
            +  ELV L+L+EFDYLITKKKL+E EDF+DV+NPCTKKE+ A+G
Sbjct: 641  EIDELVSLTLVEFDYLITKKKLEEGEDFIDVVNPCTKKETLAYG 684


>ref|XP_003591273.1| Bifunctional aminoacyl-tRNA synthetase [Medicago truncatula]
            gi|355480321|gb|AES61524.1| Bifunctional aminoacyl-tRNA
            synthetase [Medicago truncatula]
          Length = 735

 Score =  252 bits (643), Expect = 3e-65
 Identities = 122/164 (74%), Positives = 143/164 (87%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3    TINKKIIDHVCPRHTAVSAER-VLLMLSDGPDEPFVRIIPRHKKYPGAGDKATTYTKSVW 179
            TINKKIID VCPRHTAV A+R VLL L+DGP++ FVRIIPRHKKY  AG+KATTYTK +W
Sbjct: 523  TINKKIIDPVCPRHTAVIADRRVLLTLTDGPEKSFVRIIPRHKKYEAAGNKATTYTKRIW 582

Query: 180  IDLADAKSISPGEEITLMDWGNAIVKEISKDEGGSIKHLTGVLNLGGSVKTTKLKLTWLP 359
            ID ADA+S+S GEE+TLMDWGNA+VKE+ KD+ G++  L+GVL+L GSVKTTKLKLTWLP
Sbjct: 583  IDYADAESVSAGEEVTLMDWGNAVVKEVEKDQDGNVTGLSGVLHLEGSVKTTKLKLTWLP 642

Query: 360  DTYELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAFG 491
            +  ELV L+LMEFDYLITKKKL+E EDF DVLNPCTKKE+ A+G
Sbjct: 643  ELDELVSLTLMEFDYLITKKKLEEGEDFTDVLNPCTKKETLAYG 686


>ref|XP_002278667.2| PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like
            isoform 1 [Vitis vinifera]
          Length = 736

 Score =  250 bits (638), Expect = 1e-64
 Identities = 124/164 (75%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3    TINKKIIDHVCPRHTAVSAE-RVLLMLSDGPDEPFVRIIPRHKKYPGAGDKATTYTKSVW 179
            TINKKIID VCPRHTAV  E RVL+ L+DGP++PFVRIIPRHKK+ GAG+K TTYTK +W
Sbjct: 527  TINKKIIDPVCPRHTAVIDEKRVLVTLADGPEKPFVRIIPRHKKFEGAGEKCTTYTKRIW 586

Query: 180  IDLADAKSISPGEEITLMDWGNAIVKEISKDEGGSIKHLTGVLNLGGSVKTTKLKLTWLP 359
            ID ADA SIS  EEITLMDWGNAI+KEI KD+ G+I  L GVL+L GSVK TKLKLTWLP
Sbjct: 587  IDYADAVSISENEEITLMDWGNAIIKEIRKDQDGNITQLIGVLHLEGSVKATKLKLTWLP 646

Query: 360  DTYELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAFG 491
            +T ELV LSLMEFDYLITKKKLDE +DF+D LNPCTK+E+AA G
Sbjct: 647  ETSELVNLSLMEFDYLITKKKLDEGDDFLDALNPCTKRETAAVG 690


>emb|CBI39688.3| unnamed protein product [Vitis vinifera]
          Length = 276

 Score =  250 bits (638), Expect = 1e-64
 Identities = 124/164 (75%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   TINKKIIDHVCPRHTAVSAE-RVLLMLSDGPDEPFVRIIPRHKKYPGAGDKATTYTKSVW 179
           TINKKIID VCPRHTAV  E RVL+ L+DGP++PFVRIIPRHKK+ GAG+K TTYTK +W
Sbjct: 67  TINKKIIDPVCPRHTAVIDEKRVLVTLADGPEKPFVRIIPRHKKFEGAGEKCTTYTKRIW 126

Query: 180 IDLADAKSISPGEEITLMDWGNAIVKEISKDEGGSIKHLTGVLNLGGSVKTTKLKLTWLP 359
           ID ADA SIS  EEITLMDWGNAI+KEI KD+ G+I  L GVL+L GSVK TKLKLTWLP
Sbjct: 127 IDYADAVSISENEEITLMDWGNAIIKEIRKDQDGNITQLIGVLHLEGSVKATKLKLTWLP 186

Query: 360 DTYELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAFG 491
           +T ELV LSLMEFDYLITKKKLDE +DF+D LNPCTK+E+AA G
Sbjct: 187 ETSELVNLSLMEFDYLITKKKLDEGDDFLDALNPCTKRETAAVG 230


>emb|CAN76587.1| hypothetical protein VITISV_020288 [Vitis vinifera]
          Length = 736

 Score =  250 bits (638), Expect = 1e-64
 Identities = 124/164 (75%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3    TINKKIIDHVCPRHTAVSAE-RVLLMLSDGPDEPFVRIIPRHKKYPGAGDKATTYTKSVW 179
            TINKKIID VCPRHTAV  E RVL+ L+DGP++PFVRIIPRHKK+ GAG+K TTYTK +W
Sbjct: 527  TINKKIIDPVCPRHTAVIDEKRVLVTLADGPEKPFVRIIPRHKKFEGAGEKCTTYTKRIW 586

Query: 180  IDLADAKSISPGEEITLMDWGNAIVKEISKDEGGSIKHLTGVLNLGGSVKTTKLKLTWLP 359
            ID ADA SIS  EEITLMDWGNAI+KEI KD+ G+I  L GVL+L GSVK TKLKLTWLP
Sbjct: 587  IDYADAVSISENEEITLMDWGNAIIKEIRKDQDGNIMQLIGVLHLEGSVKATKLKLTWLP 646

Query: 360  DTYELVPLSLMEFDYLITKKKLDEDEDFVDVLNPCTKKESAAFG 491
            +T ELV LSLMEFDYLITKKKLDE +DF+D LNPCTK+E+AA G
Sbjct: 647  ETSELVNLSLMEFDYLITKKKLDEGDDFLDALNPCTKRETAAVG 690


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