BLASTX nr result

ID: Cnidium21_contig00005470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005470
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    78   7e-13
ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis...    77   1e-12
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana] gi|1...    73   2e-11

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/97 (38%), Positives = 57/97 (58%)
 Frame = -3

Query: 291 LCLIDHYTGSRTDIWQMNDNGVGNSWSKLLSVEQPGVLGSFKIAYPVAFSKTRTAFLLEV 112
           LC + ++ G R D+W M + GV  SW+KL SV Q  V+G  +   P+A+SK+    L+E 
Sbjct: 264 LCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEH 323

Query: 111 DENKLMWYDRENNKVKDISVHGVPVPFRSYVYTESLV 1
           D   L WYD +  +VK+  + G+P  F +  + ESL+
Sbjct: 324 DNLDLCWYDLKRKQVKN-RIPGIPYSFEADTFVESLI 359


>ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449508988|ref|XP_004163461.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 179

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/97 (40%), Positives = 54/97 (55%)
 Frame = -3

Query: 291 LCLIDHYTGSRTDIWQMNDNGVGNSWSKLLSVEQPGVLGSFKIAYPVAFSKTRTAFLLEV 112
           LCLI +Y   R ++W M + GV  SW KLL+V Q   +GS K   P+ +SKT    LL  
Sbjct: 59  LCLIANYDRVRFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKSVKPLTYSKTGCKVLLLH 118

Query: 111 DENKLMWYDRENNKVKDISVHGVPVPFRSYVYTESLV 1
           +  KL+WYD +   V D  + G+P  F +    ESL+
Sbjct: 119 NRRKLIWYDLDTQTVHDAVIDGLPHSFDAETLVESLI 155


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/98 (36%), Positives = 57/98 (58%)
 Frame = -3

Query: 294 SLCLIDHYTGSRTDIWQMNDNGVGNSWSKLLSVEQPGVLGSFKIAYPVAFSKTRTAFLLE 115
           +LC++ +Y     D+W M + G+  SW K+ SV+    +G+F    P+ +SK     LLE
Sbjct: 280 NLCVMCNYEYVCVDVWVMREYGMKESWCKMFSVQGIKWIGAFMFLRPLIYSKDGGKVLLE 339

Query: 114 VDENKLMWYDRENNKVKDISVHGVPVPFRSYVYTESLV 1
           V++ KL+WYD +N   K + + G P  + S +Y ESLV
Sbjct: 340 VNDEKLVWYDWKNKHAKVVKIRGGPNSYGSEMYVESLV 377


>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/98 (37%), Positives = 54/98 (55%)
 Frame = -3

Query: 294 SLCLIDHYTGSRTDIWQMNDNGVGNSWSKLLSVEQPGVLGSFKIAYPVAFSKTRTAFLLE 115
           +LC++ +Y     D+W M + GV  SW K+ SV     + +F    P+ +SK     LLE
Sbjct: 272 NLCVMCNYEHVCVDVWVMKEYGVKESWCKMFSVHAIKWISAFMFLRPLVYSKGGDMVLLE 331

Query: 114 VDENKLMWYDRENNKVKDISVHGVPVPFRSYVYTESLV 1
           V+  KL+WYD +N   K + V G P  F S +Y ESL+
Sbjct: 332 VNGEKLLWYDWKNKHAKVVRVRGGPSSFGSEMYVESLI 369


>ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana]
           gi|145333023|ref|NP_001078377.1| F-box protein CPR30
           [Arabidopsis thaliana]
           gi|142989747|sp|Q9SU30.2|CPR30_ARATH RecName: Full=F-box
           protein CPR30; AltName: Full=Protein CONSTITUTIVE
           EXPRESSER OF PR GENES 30 gi|332657747|gb|AEE83147.1|
           F-box protein CPR30 [Arabidopsis thaliana]
           gi|332657748|gb|AEE83148.1| F-box protein CPR30
           [Arabidopsis thaliana]
          Length = 413

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/97 (32%), Positives = 57/97 (58%)
 Frame = -3

Query: 291 LCLIDHYTGSRTDIWQMNDNGVGNSWSKLLSVEQPGVLGSFKIAYPVAFSKTRTAFLLEV 112
           LCL+ +Y  S  D+W M +  V +SW+K+ +V++P  + SF    P+ +SK +   LLE+
Sbjct: 272 LCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLEL 331

Query: 111 DENKLMWYDRENNKVKDISVHGVPVPFRSYVYTESLV 1
           +  KL+W+D E+ K+  + +   P  + + +   SLV
Sbjct: 332 NNTKLVWFDLESKKMSTLRIKDCPSSYSAELVVSSLV 368


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