BLASTX nr result

ID: Cnidium21_contig00005461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005461
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43869.1| unknown [Medicago truncatula]                          115   5e-24
ref|XP_002298844.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_003532138.1| PREDICTED: cell differentiation protein RCD1...   112   4e-23
ref|XP_002317325.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_004139793.1| PREDICTED: cell differentiation protein RCD1...   109   3e-22

>gb|AFK43869.1| unknown [Medicago truncatula]
          Length = 306

 Score =  115 bits (287), Expect = 5e-24
 Identities = 65/115 (56%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
 Frame = +1

Query: 1   AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDTTFXXXXXXXXXXXXXXXXXX 180
           AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRD TF                  
Sbjct: 224 AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATF------------------ 265

Query: 181 XXXXXXXXXXXXXXXXXXXXXXTTRRWLQQLLINVQGPRV-TLQGGGGFEHMMVN 342
                                 TTR+WLQQL+ NV G RV  LQGGGGF+H+MVN
Sbjct: 266 --------------SSCLREDPTTRKWLQQLIHNVGGNRVPALQGGGGFDHLMVN 306


>ref|XP_002298844.1| predicted protein [Populus trichocarpa] gi|222846102|gb|EEE83649.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  114 bits (285), Expect = 8e-24
 Identities = 66/116 (56%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
 Frame = +1

Query: 1   AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDTTFXXXXXXXXXXXXXXXXXX 180
           AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRD TF                  
Sbjct: 240 AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATF------------------ 281

Query: 181 XXXXXXXXXXXXXXXXXXXXXXTTRRWLQQLLINVQGPRVT--LQGGGGFEHMMVN 342
                                 TTRRWLQQLL NV G RV   LQ GGGF+HM+VN
Sbjct: 282 --------------SSCLREDPTTRRWLQQLLHNVGGNRVVPGLQAGGGFDHMLVN 323


>ref|XP_003532138.1| PREDICTED: cell differentiation protein RCD1 homolog [Glycine max]
          Length = 325

 Score =  112 bits (279), Expect = 4e-23
 Identities = 65/114 (57%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
 Frame = +1

Query: 1   AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDTTFXXXXXXXXXXXXXXXXXX 180
           AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRD TF                  
Sbjct: 243 AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATF------------------ 284

Query: 181 XXXXXXXXXXXXXXXXXXXXXXTTRRWLQQLLINVQGPRV-TLQGGGGFEHMMV 339
                                 TTRRWLQQLL NV G RV  LQ GGGF+HM+V
Sbjct: 285 --------------STCLREDPTTRRWLQQLLHNVGGNRVPALQAGGGFDHMIV 324


>ref|XP_002317325.1| predicted protein [Populus trichocarpa] gi|222860390|gb|EEE97937.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  111 bits (278), Expect = 5e-23
 Identities = 65/115 (56%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
 Frame = +1

Query: 1   AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDTTFXXXXXXXXXXXXXXXXXX 180
           AEQPSSRLLKHIIRCYLRLSDNPRAC ALRSCLPDMLRD TF                  
Sbjct: 238 AEQPSSRLLKHIIRCYLRLSDNPRACHALRSCLPDMLRDATF------------------ 279

Query: 181 XXXXXXXXXXXXXXXXXXXXXXTTRRWLQQLLINVQGPRVT-LQGGGGFEHMMVN 342
                                 TTRRWLQQLL NV G RV  LQ GGGF+HM+VN
Sbjct: 280 --------------SSCLREDPTTRRWLQQLLHNVGGNRVPGLQAGGGFDHMLVN 320


>ref|XP_004139793.1| PREDICTED: cell differentiation protein RCD1 homolog [Cucumis
           sativus] gi|449517076|ref|XP_004165572.1| PREDICTED:
           cell differentiation protein RCD1 homolog [Cucumis
           sativus]
          Length = 319

 Score =  109 bits (272), Expect = 3e-22
 Identities = 64/115 (55%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
 Frame = +1

Query: 1   AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDTTFXXXXXXXXXXXXXXXXXX 180
           AEQPSSRLLKHIIRCYLRLSDNP+ACDALRSCLPDMLRD TF                  
Sbjct: 237 AEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATF------------------ 278

Query: 181 XXXXXXXXXXXXXXXXXXXXXXTTRRWLQQLLINVQGPRV-TLQGGGGFEHMMVN 342
                                 TTRRWLQQLL NV   RV  LQ G GF+HMMVN
Sbjct: 279 --------------NSCLREDPTTRRWLQQLLHNVGMSRVPALQAGAGFDHMMVN 319


Top