BLASTX nr result

ID: Cnidium21_contig00005434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005434
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282485.1| PREDICTED: uncharacterized protein LOC100267...   173   1e-41
emb|CAN69897.1| hypothetical protein VITISV_032062 [Vitis vinifera]   173   1e-41
ref|XP_002523584.1| Splicing factor, arginine/serine-rich, putat...   172   3e-41
ref|XP_004149706.1| PREDICTED: uncharacterized protein LOC101213...   172   4e-41
ref|XP_003517297.1| PREDICTED: uncharacterized protein LOC100792...   161   8e-38

>ref|XP_002282485.1| PREDICTED: uncharacterized protein LOC100267903 [Vitis vinifera]
           gi|296082422|emb|CBI21427.3| unnamed protein product
           [Vitis vinifera]
          Length = 552

 Score =  173 bits (439), Expect = 1e-41
 Identities = 90/169 (53%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
 Frame = +1

Query: 58  GMDIIAKDFGVKRYGWLVYMDXXXXXXXXXXXXIVKGDPAMKKLSRKDRRKASQIXXXXX 237
           GMD IAK+FGVKRYGWLVYMD            ++KGDPA++KLSRK+RRKASQI     
Sbjct: 211 GMDTIAKEFGVKRYGWLVYMDKKAKEEEKRQKEVIKGDPAIRKLSRKERRKASQIERERE 270

Query: 238 XXVARGVGNRVLHHDPYRESRRSPTYEA-XXXXXXXXXXXXXXXXXXXXXXXXXXEDVSR 414
               R  G R+L HDPYRE RRSPTY+A                           +DV R
Sbjct: 271 REATRVTGTRMLQHDPYREPRRSPTYDAYPRSRRSRSRSRSYSPSYSRRYARGGHDDVHR 330

Query: 415 SKSRAPKIEYITEFGGAGEGAEPKIVGYSPPPSPRSEAGSLNRPSSGHI 561
           SKS+ PKIEYITEFGG+ +G +PK  G+SPPPSP S A +LNRPSSG I
Sbjct: 331 SKSKTPKIEYITEFGGSADGDDPKFEGFSPPPSPPSHADALNRPSSGRI 379


>emb|CAN69897.1| hypothetical protein VITISV_032062 [Vitis vinifera]
          Length = 627

 Score =  173 bits (439), Expect = 1e-41
 Identities = 90/169 (53%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
 Frame = +1

Query: 58  GMDIIAKDFGVKRYGWLVYMDXXXXXXXXXXXXIVKGDPAMKKLSRKDRRKASQIXXXXX 237
           GMD IAK+FGVKRYGWLVYMD            ++KGDPA++KLSRK+RRKASQI     
Sbjct: 195 GMDTIAKEFGVKRYGWLVYMDKKAKEEEKRQKEVIKGDPAIRKLSRKERRKASQIERERE 254

Query: 238 XXVARGVGNRVLHHDPYRESRRSPTYEA-XXXXXXXXXXXXXXXXXXXXXXXXXXEDVSR 414
               R  G R+L HDPYRE RRSPTY+A                           +DV R
Sbjct: 255 REATRVTGTRMLQHDPYREPRRSPTYDAYPRSRRSRSRSRSYSPSYSRRYARGGHDDVHR 314

Query: 415 SKSRAPKIEYITEFGGAGEGAEPKIVGYSPPPSPRSEAGSLNRPSSGHI 561
           SKS+ PKIEYITEFGG+ +G +PK  G+SPPPSP S A +LNRPSSG I
Sbjct: 315 SKSKTPKIEYITEFGGSADGDDPKFEGFSPPPSPPSHADALNRPSSGRI 363


>ref|XP_002523584.1| Splicing factor, arginine/serine-rich, putative [Ricinus communis]
           gi|223537146|gb|EEF38779.1| Splicing factor,
           arginine/serine-rich, putative [Ricinus communis]
          Length = 553

 Score =  172 bits (437), Expect = 3e-41
 Identities = 92/170 (54%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
 Frame = +1

Query: 58  GMDIIAKDFGVKRYGWLVYMDXXXXXXXXXXXXIVKGDPAMKKLSRKDRRKASQIXXXXX 237
           GMD+IAK+FGVKRYGWLVYMD            I+KGDPA++KLSRK+RRKASQI     
Sbjct: 214 GMDMIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLSRKERRKASQIERERE 273

Query: 238 XXVARGVGNRVLHHDPYRESRRSPTYEA--XXXXXXXXXXXXXXXXXXXXXXXXXXEDVS 411
              AR  G RVLHHDPYRE+RRSPTYEA                            ++V 
Sbjct: 274 REAARITGTRVLHHDPYREARRSPTYEAYSRSRRSRSRSRSYSPSHSKRYGRGGHSDEVH 333

Query: 412 RSKSRAPKIEYITEFGGAGEGAEPKIVGYSPPPSPRSEAGSLNRPSSGHI 561
           RSKSR PKIEYITEFG +G+G + K+ GYSPPPSP  +A  L+RP SG I
Sbjct: 334 RSKSRTPKIEYITEFGSSGDGDKLKLEGYSPPPSPPFQADMLSRPYSGRI 383


>ref|XP_004149706.1| PREDICTED: uncharacterized protein LOC101213620 [Cucumis sativus]
          Length = 557

 Score =  172 bits (435), Expect = 4e-41
 Identities = 89/168 (52%), Positives = 106/168 (63%)
 Frame = +1

Query: 58  GMDIIAKDFGVKRYGWLVYMDXXXXXXXXXXXXIVKGDPAMKKLSRKDRRKASQIXXXXX 237
           GM++IAK+FGVKRYGWLVYMD            I+KGDPA++KLSRK+RRKASQ+     
Sbjct: 214 GMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLSRKERRKASQMERERE 273

Query: 238 XXVARGVGNRVLHHDPYRESRRSPTYEAXXXXXXXXXXXXXXXXXXXXXXXXXXEDVSRS 417
              AR  G RVLHHDPYRESRRSPTY+A                          +DV RS
Sbjct: 274 REAARITGTRVLHHDPYRESRRSPTYDA-YPRSRRSRSRSHSPSHSRHHSHGHFDDVHRS 332

Query: 418 KSRAPKIEYITEFGGAGEGAEPKIVGYSPPPSPRSEAGSLNRPSSGHI 561
           K + PKIE+ITEFGG+GE  EP++ G SPP SP S+   +NRPSSG I
Sbjct: 333 KPKTPKIEFITEFGGSGESKEPRLEGLSPPQSPPSQPDMINRPSSGRI 380


>ref|XP_003517297.1| PREDICTED: uncharacterized protein LOC100792600 [Glycine max]
          Length = 544

 Score =  161 bits (407), Expect = 8e-38
 Identities = 86/170 (50%), Positives = 103/170 (60%), Gaps = 2/170 (1%)
 Frame = +1

Query: 58  GMDIIAKDFGVKRYGWLVYMDXXXXXXXXXXXXIVKGDPAMKKLSRKDRRKASQIXXXXX 237
           GM+IIAK++GVKRYGWLVYMD            ++KGDPA++KLSRK+RRKASQI     
Sbjct: 211 GMEIIAKEYGVKRYGWLVYMDKKAKEEEKRQKELIKGDPAIRKLSRKERRKASQIERERE 270

Query: 238 XXVARGVGNRVLHHDPYRESRRSPTYEA--XXXXXXXXXXXXXXXXXXXXXXXXXXEDVS 411
               R  G RVLHHDPYRE+R+SPTYEA                            +D+ 
Sbjct: 271 REATRISGTRVLHHDPYRETRQSPTYEAYSRSRRSRSPLRSYSPSHSRRYSRSGHSDDIH 330

Query: 412 RSKSRAPKIEYITEFGGAGEGAEPKIVGYSPPPSPRSEAGSLNRPSSGHI 561
           RSK R PKIEYITEFGG+G   E +  G+SPP SP S+   LNRP+SG I
Sbjct: 331 RSKPRTPKIEYITEFGGSGAADERRPEGFSPPRSPTSQVDLLNRPTSGCI 380


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