BLASTX nr result

ID: Cnidium21_contig00005431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005431
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XF97.1|RL4_PRUAR RecName: Full=60S ribosomal protein L4; Al...    97   1e-18
gb|ACA23473.1| 60S ribosomal protein L1 [Arachis diogoi]               95   7e-18
ref|XP_003590168.1| 60S ribosomal protein L4 [Medicago truncatul...    94   1e-17
ref|XP_002880618.1| 60S ribosomal protein L4/L1 [Arabidopsis lyr...    94   2e-17
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...    93   2e-17

>sp|Q9XF97.1|RL4_PRUAR RecName: Full=60S ribosomal protein L4; AltName: Full=L1
           gi|4887131|gb|AAD32206.1|AF134732_1 60S ribosomal
           protein L1 [Prunus armeniaca]
          Length = 408

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = -3

Query: 318 SKKEKLDQKRKPLSKEEASKIKAAGKGWYKTMISDSDYTEFDNFGKWLGVSQ 163
           +KKEKLD+KRKP+SKEEAS IKAAGK WY+TMISDSDYTEFDNF KWLGVSQ
Sbjct: 357 AKKEKLDKKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408


>gb|ACA23473.1| 60S ribosomal protein L1 [Arachis diogoi]
          Length = 132

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/52 (82%), Positives = 48/52 (92%)
 Frame = -3

Query: 318 SKKEKLDQKRKPLSKEEASKIKAAGKGWYKTMISDSDYTEFDNFGKWLGVSQ 163
           +KKEKLDQKRK +SKEEAS I+AAGK WY+TM+SDSDYTEFDNF KWLGVSQ
Sbjct: 81  AKKEKLDQKRKTVSKEEASAIRAAGKAWYQTMVSDSDYTEFDNFSKWLGVSQ 132


>ref|XP_003590168.1| 60S ribosomal protein L4 [Medicago truncatula]
           gi|355479216|gb|AES60419.1| 60S ribosomal protein L4
           [Medicago truncatula]
          Length = 406

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/52 (82%), Positives = 47/52 (90%)
 Frame = -3

Query: 318 SKKEKLDQKRKPLSKEEASKIKAAGKGWYKTMISDSDYTEFDNFGKWLGVSQ 163
           +KKEKLD+KRK +SKEEAS IKAAGK WY TM+SDSDYTEFDNF KWLGVSQ
Sbjct: 355 AKKEKLDKKRKTVSKEEASAIKAAGKAWYNTMVSDSDYTEFDNFSKWLGVSQ 406


>ref|XP_002880618.1| 60S ribosomal protein L4/L1 [Arabidopsis lyrata subsp. lyrata]
           gi|297326457|gb|EFH56877.1| 60S ribosomal protein L4/L1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/52 (82%), Positives = 47/52 (90%)
 Frame = -3

Query: 318 SKKEKLDQKRKPLSKEEASKIKAAGKGWYKTMISDSDYTEFDNFGKWLGVSQ 163
           SK EKL++KRKP+SKEEA KIKAAGK WY+TMISDSDYTEFDNF KWLGV Q
Sbjct: 343 SKNEKLERKRKPISKEEAMKIKAAGKPWYRTMISDSDYTEFDNFTKWLGVEQ 394


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/51 (84%), Positives = 46/51 (90%)
 Frame = -3

Query: 315 KKEKLDQKRKPLSKEEASKIKAAGKGWYKTMISDSDYTEFDNFGKWLGVSQ 163
           KKEKLD+KRK +SKEEAS IKAAGK WY TM+SDSDYTEFDNF KWLGVSQ
Sbjct: 355 KKEKLDKKRKTVSKEEASAIKAAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405


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