BLASTX nr result

ID: Cnidium21_contig00005394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005394
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9AT35.1|RL23A_DAUCA RecName: Full=60S ribosomal protein L23a...   250   1e-64
ref|XP_004147702.1| PREDICTED: 60S ribosomal protein L23a-like [...   236   3e-60
ref|XP_004149813.1| PREDICTED: 60S ribosomal protein L23a-like [...   234   1e-59
ref|XP_004140407.1| PREDICTED: 60S ribosomal protein L23a-like i...   234   1e-59
ref|XP_004140409.1| PREDICTED: 60S ribosomal protein L23a-like i...   233   1e-59

>sp|Q9AT35.1|RL23A_DAUCA RecName: Full=60S ribosomal protein L23a
           gi|13560777|gb|AAK30202.1|AF349961_1 ribosome protein
           L23a [Daucus carota]
          Length = 154

 Score =  250 bits (638), Expect = 1e-64
 Identities = 130/154 (84%), Positives = 130/154 (84%)
 Frame = +1

Query: 94  MSPXXXXXXXXXXXXTQALKTAKAVKSGTTTFKKVKKIRTSVTFHRPRTLTKDRNPKYPR 273
           MSP             QALKTAKAVKSGTT FKKVKKIRTSVTFHRPRTLTKDRNPKYPR
Sbjct: 1   MSPAKVDVTKKSDAKAQALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPR 60

Query: 274 ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANXXXXXXXXXXMYDIQTK 453
           ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRAN          MYDIQTK
Sbjct: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTK 120

Query: 454 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 555
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154


>ref|XP_004147702.1| PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus]
           gi|449514958|ref|XP_004164525.1| PREDICTED: 60S
           ribosomal protein L23a-like [Cucumis sativus]
          Length = 153

 Score =  236 bits (601), Expect = 3e-60
 Identities = 121/138 (87%), Positives = 122/138 (88%)
 Frame = +1

Query: 142 QALKTAKAVKSGTTTFKKVKKIRTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILK 321
           QALKTAKAVKSG T  KK KKIRTSVTFHRP+TL KDRNPKYPRIS TPRNKLDQYQILK
Sbjct: 16  QALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRISVTPRNKLDQYQILK 75

Query: 322 YPLTTESAMKKIEDNNTLVFIVDIRANXXXXXXXXXXMYDIQTKKVNTLIRPDGTKKAYV 501
           YPLTTESAMKKIEDNNTLVFIVDIRAN          MYDIQTKKVNTLIRPDGTKKAYV
Sbjct: 76  YPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKKVNTLIRPDGTKKAYV 135

Query: 502 RLTPDYDALDVANKIGII 555
           RLTPDYDALDVANKIGII
Sbjct: 136 RLTPDYDALDVANKIGII 153


>ref|XP_004149813.1| PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus]
           gi|449519086|ref|XP_004166566.1| PREDICTED: 60S
           ribosomal protein L23a-like [Cucumis sativus]
          Length = 153

 Score =  234 bits (596), Expect = 1e-59
 Identities = 120/138 (86%), Positives = 122/138 (88%)
 Frame = +1

Query: 142 QALKTAKAVKSGTTTFKKVKKIRTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILK 321
           QALKTAKAVKSG T  KK KKIRTSVTFHRP+TL KDRNPKYPRIS TPRNKLDQYQILK
Sbjct: 16  QALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRISVTPRNKLDQYQILK 75

Query: 322 YPLTTESAMKKIEDNNTLVFIVDIRANXXXXXXXXXXMYDIQTKKVNTLIRPDGTKKAYV 501
           YPLTTESAMKKIEDNNTLVFIVDIRA+          MYDIQTKKVNTLIRPDGTKKAYV
Sbjct: 76  YPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYV 135

Query: 502 RLTPDYDALDVANKIGII 555
           RLTPDYDALDVANKIGII
Sbjct: 136 RLTPDYDALDVANKIGII 153


>ref|XP_004140407.1| PREDICTED: 60S ribosomal protein L23a-like isoform 1 [Cucumis
           sativus] gi|449497783|ref|XP_004160517.1| PREDICTED: 60S
           ribosomal protein L23a-like isoform 1 [Cucumis sativus]
          Length = 153

 Score =  234 bits (596), Expect = 1e-59
 Identities = 123/154 (79%), Positives = 126/154 (81%)
 Frame = +1

Query: 94  MSPXXXXXXXXXXXXTQALKTAKAVKSGTTTFKKVKKIRTSVTFHRPRTLTKDRNPKYPR 273
           M+P             QALKTAKAVKSG T FKK KKIRTSVTFHRP+TL KDRNPKYPR
Sbjct: 1   MAPKDADMTKKADPKAQALKTAKAVKSGPT-FKKAKKIRTSVTFHRPKTLKKDRNPKYPR 59

Query: 274 ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANXXXXXXXXXXMYDIQTK 453
           IS TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRA+          MYDIQTK
Sbjct: 60  ISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 119

Query: 454 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 555
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 120 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153


>ref|XP_004140409.1| PREDICTED: 60S ribosomal protein L23a-like isoform 3 [Cucumis
           sativus] gi|449498367|ref|XP_004160519.1| PREDICTED: 60S
           ribosomal protein L23a-like isoform 3 [Cucumis sativus]
          Length = 146

 Score =  233 bits (595), Expect = 1e-59
 Identities = 121/138 (87%), Positives = 123/138 (89%)
 Frame = +1

Query: 142 QALKTAKAVKSGTTTFKKVKKIRTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILK 321
           QALKTAKAVKSG T FKK KKIRTSVTFHRP+TL KDRNPKYPRIS TPRNKLDQYQILK
Sbjct: 10  QALKTAKAVKSGPT-FKKAKKIRTSVTFHRPKTLKKDRNPKYPRISVTPRNKLDQYQILK 68

Query: 322 YPLTTESAMKKIEDNNTLVFIVDIRANXXXXXXXXXXMYDIQTKKVNTLIRPDGTKKAYV 501
           YPLTTESAMKKIEDNNTLVFIVDIRA+          MYDIQTKKVNTLIRPDGTKKAYV
Sbjct: 69  YPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYV 128

Query: 502 RLTPDYDALDVANKIGII 555
           RLTPDYDALDVANKIGII
Sbjct: 129 RLTPDYDALDVANKIGII 146


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