BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005378
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513582.1| polypyrimidine tract binding protein, putati...   316   5e-84
ref|XP_002322027.1| predicted protein [Populus trichocarpa] gi|2...   316   7e-84
gb|ABK95840.1| unknown [Populus trichocarpa]                          310   4e-82
ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding prot...   299   7e-79
emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]   299   7e-79

>ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223547490|gb|EEF48985.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 447

 Score =  316 bits (810), Expect = 5e-84
 Identities = 156/223 (69%), Positives = 176/223 (78%)
 Frame = +3

Query: 3   QSHRSRDYTNPSLPVNPSAIDATGQISMGLDGKRLEPESNVLLASIENMPYEVTLEVLHM 182
           QSHRSRDYTNP+LPV PSAID +G  ++GLDGK+LEPESNVLLASIENM Y VTL+VLHM
Sbjct: 205 QSHRSRDYTNPNLPVAPSAIDGSGMFTVGLDGKKLEPESNVLLASIENMQYAVTLDVLHM 264

Query: 183 VFSAFGTVLKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGGYCKLHISYSRHT 362
           VFSAFG V KIAMFDKNGG+QALIQYPDVQTAVVAKEALEGHCIYDGG+CKLHISYSRH+
Sbjct: 265 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHS 324

Query: 363 DLSIKVNNDRSRDYTIPVAPVLSTQPSILXXXXXXXXXXXXXXYNGSQFAPAHQVPAMHP 542
           DLSIKVNNDRSRDYTIP   +++ QPSIL              Y+G+QFAP  + P M  
Sbjct: 325 DLSIKVNNDRSRDYTIPNPAMVNPQPSILGQQPVPTVGPPAHPYSGAQFAPHTEHPVMPQ 384

Query: 543 PTSGWSAASPAVPQSMPGQMQNHQYMPPASMPSEYGHQMMHAP 671
           P++GW+AA PA P SMP QM NH Y P  +MP + G  MM  P
Sbjct: 385 PSAGWTAAVPAGPHSMPPQMNNHPYFPSGAMPPQMGPGMMQMP 427



 Score = 96.7 bits (239), Expect = 9e-18
 Identities = 56/109 (51%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
 Frame = +3

Query: 120 NVLLASIENMPYE-VTLEVLHMVFSAFGTVLKIAMFDKNGGVQALIQYPDVQTAVVAKEA 296
           NVLL +IE      V+++VLH+VFSAFG V KI  F+K  G QAL+Q+ D +TA  AK A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 170

Query: 297 LEGHCI------YDGGYCKLHISYSRHTDLSIKVNNDRSRDYTIPVAPV 425
           L+G  I         G C L I+YS HTDLS+K  + RSRDYT P  PV
Sbjct: 171 LDGRNIPRYLLPEHIGPCTLRITYSAHTDLSVKFQSHRSRDYTNPNLPV 219


>ref|XP_002322027.1| predicted protein [Populus trichocarpa] gi|222869023|gb|EEF06154.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  316 bits (809), Expect = 7e-84
 Identities = 159/241 (65%), Positives = 180/241 (74%), Gaps = 4/241 (1%)
 Frame = +3

Query: 3   QSHRSRDYTNPSLPVNPSAIDATGQISMGLDGKRLEPESNVLLASIENMPYEVTLEVLHM 182
           QSHRSRDYTNP+LPV  SAIDA G  SMGLDGK+LEPESNVLLASIENM Y VTL+VLHM
Sbjct: 205 QSHRSRDYTNPNLPVAQSAIDANGMFSMGLDGKKLEPESNVLLASIENMQYAVTLDVLHM 264

Query: 183 VFSAFGTVLKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGGYCKLHISYSRHT 362
           VFS+FG V KIAMFDKN G+QALIQYPDVQTAVVAKEALEGHCIYDGG+CKLH+SYSRH 
Sbjct: 265 VFSSFGPVQKIAMFDKNSGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHLSYSRHN 324

Query: 363 DLSIKVNNDRSRDYTIPVAPVLSTQPSILXXXXXXXXXXXXXXYNGSQFAPAHQVPAMHP 542
           DLSIKVNNDRSRDYTIP   +++ QPSIL              Y G+QFAP  +   +  
Sbjct: 325 DLSIKVNNDRSRDYTIPNNVMVNPQPSILGQQPVATHGPPSHLYTGAQFAPTTEHSMIPQ 384

Query: 543 PTSGWSAASPAVPQSMPGQMQNHQYMPPASMPSEYGHQMMHAPNVYH----HAGSFPRYP 710
           P+SGW+   P VP SMPGQM N+ Y+PP +MP + GH MM  P+  H    H  + P Y 
Sbjct: 385 PSSGWATGFPPVPNSMPGQMNNNPYLPPGTMPPQMGHGMMQMPS--HGGPPHTHAMPPYR 442

Query: 711 P 713
           P
Sbjct: 443 P 443



 Score = 93.6 bits (231), Expect = 7e-17
 Identities = 56/109 (51%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
 Frame = +3

Query: 120 NVLLASIENMPYE-VTLEVLHMVFSAFGTVLKIAMFDKNGGVQALIQYPDVQTAVVAKEA 296
           NVLL +IE      V+++VLH+VFSAFG V KI  F+K    QAL+Q+ DV+TA  AK A
Sbjct: 111 NVLLITIEGADARLVSIDVLHLVFSAFGFVHKITTFEKMDRFQALVQFSDVETASSAKNA 170

Query: 297 LEGHCIYDG------GYCKLHISYSRHTDLSIKVNNDRSRDYTIPVAPV 425
           L+G  I         G C L I+YS HTDLS+K  + RSRDYT P  PV
Sbjct: 171 LDGRNIPSYLLPEHLGPCTLRIAYSGHTDLSVKFQSHRSRDYTNPNLPV 219


>gb|ABK95840.1| unknown [Populus trichocarpa]
          Length = 442

 Score =  310 bits (794), Expect = 4e-82
 Identities = 158/239 (66%), Positives = 180/239 (75%), Gaps = 2/239 (0%)
 Frame = +3

Query: 3   QSHRSRDYTNPSLPVNPSAIDATGQISMGLDGKRLEPESNVLLASIENMPYEVTLEVLHM 182
           QSHRSRDYTN +LPV PSAIDA G  S+GLDGK+LEPESNVLLASIENM Y VTL+VLHM
Sbjct: 205 QSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHM 264

Query: 183 VFSAFGTVLKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGGYCKLHISYSRHT 362
           VFS+FG V KIAMFDKNGG+QALIQYPDVQTAVVAKEALEGHCIYDGG+CKLH+SYSRH+
Sbjct: 265 VFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHLSYSRHS 324

Query: 363 DLSIKVNNDRSRDYTIPVAPVLSTQPSILXXXXXXXXXXXXXXYNGSQFAPAHQVPAMHP 542
           DLSIKVNNDRSRDYTIP   +++ QPSIL              Y G+Q    HQ+  M  
Sbjct: 325 DLSIKVNNDRSRDYTIPNTVMMNPQPSILGQQPVATHGPPAHTYPGAQH---HQM--MPQ 379

Query: 543 PTSGWSAASPAVPQSMPGQMQNHQYMPPASMPSEYGHQMMHAPN--VYHHAGSFPRYPP 713
           P++GW+   P VP SMP QM N+ Y+PP +MP + GH MM  PN     HA + P Y P
Sbjct: 380 PSAGWATGGPPVPHSMPAQMNNNPYLPPGTMPPQMGHGMMQMPNHGGLPHAPAMPPYRP 438



 Score = 96.7 bits (239), Expect = 9e-18
 Identities = 57/111 (51%), Positives = 71/111 (63%), Gaps = 10/111 (9%)
 Frame = +3

Query: 120 NVLLASIENMPYE-VTLEVLHMVFSAFGTVLKIAMFDKNGGVQALIQYPDVQTAVVAKEA 296
           NVLL +IE      V+++VLH+VFSAFG V KI  F+K  G QAL+Q+ D +TA  AK A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 170

Query: 297 LEGHCIYDG------GYCKLHISYSRHTDLSIKVNNDRSRDYT---IPVAP 422
           L+G  I         G C L I+YS HTDLS+K  + RSRDYT   +PVAP
Sbjct: 171 LDGRNIPSYLLPEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPVAP 221


>ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           [Vitis vinifera]
          Length = 446

 Score =  299 bits (766), Expect = 7e-79
 Identities = 149/220 (67%), Positives = 169/220 (76%), Gaps = 6/220 (2%)
 Frame = +3

Query: 3   QSHRSRDYTNPSLPVNPSAIDATGQISMGLDGKRLEPESNVLLASIENMPYEVTLEVLHM 182
           QSHRSRDYTNP LPV  SAID +GQ SMG DG+++EPESNVLLASIENM Y VTL+VLHM
Sbjct: 205 QSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPESNVLLASIENMQYAVTLDVLHM 264

Query: 183 VFSAFGTVLKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGGYCKLHISYSRHT 362
           VFSAFG + KIAMFDKNGGVQALIQYPDVQTA+VAKEALEGHCIYDGG+CKLHISYSRHT
Sbjct: 265 VFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALEGHCIYDGGFCKLHISYSRHT 324

Query: 363 DLSIKVNNDRSRDYTIPVAPVLSTQPSILXXXXXXXXXXXXXXYNGSQFAPAHQVPAMHP 542
           DLSIKVNNDRSRDYT   +PVLS+QPS+L              + G+Q+A     P +H 
Sbjct: 325 DLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGPSTHQFEGAQYASPSDQPVIHQ 381

Query: 543 PTSGW------SAASPAVPQSMPGQMQNHQYMPPASMPSE 644
           P++GW      + A P  PQSMP Q  NH YMPP +MP +
Sbjct: 382 PSAGWATSAAAAGAPPPPPQSMPMQQHNHPYMPPGTMPPQ 421



 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 56/112 (50%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
 Frame = +3

Query: 120 NVLLASIENMPYE-VTLEVLHMVFSAFGTVLKIAMFDKNGGVQALIQYPDVQTAVVAKEA 296
           NVLL +IE      V+++VLH+VFSAFG V KI  F+K  G QAL+Q+ D +TA  AK A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNA 170

Query: 297 LEGHCI------YDGGYCKLHISYSRHTDLSIKVNNDRSRDYTIPVAPVLST 434
           L+G  I         G C L I++S HTDLS+K  + RSRDYT P  PV S+
Sbjct: 171 LDGRSIPRYLLPEHLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASS 222


>emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]
          Length = 755

 Score =  299 bits (766), Expect = 7e-79
 Identities = 149/220 (67%), Positives = 169/220 (76%), Gaps = 6/220 (2%)
 Frame = +3

Query: 3    QSHRSRDYTNPSLPVNPSAIDATGQISMGLDGKRLEPESNVLLASIENMPYEVTLEVLHM 182
            QSHRSRDYTNP LPV  SAID +GQ SMG DG+++EPESNVLLASIENM Y VTL+VLHM
Sbjct: 514  QSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPESNVLLASIENMQYAVTLDVLHM 573

Query: 183  VFSAFGTVLKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGGYCKLHISYSRHT 362
            VFSAFG + KIAMFDKNGGVQALIQYPDVQTA+VAKEALEGHCIYDGG+CKLHISYSRHT
Sbjct: 574  VFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALEGHCIYDGGFCKLHISYSRHT 633

Query: 363  DLSIKVNNDRSRDYTIPVAPVLSTQPSILXXXXXXXXXXXXXXYNGSQFAPAHQVPAMHP 542
            DLSIKVNNDRSRDYT   +PVLS+QPS+L              + G+Q+A     P +H 
Sbjct: 634  DLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGPSTHQFEGAQYASPSDQPVIHQ 690

Query: 543  PTSGW------SAASPAVPQSMPGQMQNHQYMPPASMPSE 644
            P++GW      + A P  PQSMP Q  NH YMPP +MP +
Sbjct: 691  PSAGWATSAAAAGAPPPPPQSMPMQQHNHPYMPPGTMPPQ 730



 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 56/112 (50%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
 Frame = +3

Query: 120 NVLLASIENMPYE-VTLEVLHMVFSAFGTVLKIAMFDKNGGVQALIQYPDVQTAVVAKEA 296
           NVLL +IE      V+++VLH+VFSAFG V KI  F+K  G QAL+Q+ D +TA  AK A
Sbjct: 420 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNA 479

Query: 297 LEGHCI------YDGGYCKLHISYSRHTDLSIKVNNDRSRDYTIPVAPVLST 434
           L+G  I         G C L I++S HTDLS+K  + RSRDYT P  PV S+
Sbjct: 480 LDGRSIPRYLLPEHLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASS 531