BLASTX nr result

ID: Cnidium21_contig00005305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005305
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530287.1| Protein SUA5, putative [Ricinus communis] gi...    75   6e-12
ref|XP_002313460.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002879291.1| hypothetical protein ARALYDRAFT_482017 [Arab...    71   1e-10
ref|XP_003538209.1| PREDICTED: yrdC domain-containing protein, m...    70   1e-10
ref|XP_003606393.1| YrdC domain-containing protein [Medicago tru...    70   1e-10

>ref|XP_002530287.1| Protein SUA5, putative [Ricinus communis]
           gi|223530185|gb|EEF32094.1| Protein SUA5, putative
           [Ricinus communis]
          Length = 233

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = -1

Query: 133 LVRPATEEFTKEAVTALRAGKVIAVPTDTLYGFACDACSLGAVN 2
           +VRPATE + +EAV AL+AGKVIAVPTDTLYGFACDACSL AVN
Sbjct: 19  VVRPATELYAEEAVEALKAGKVIAVPTDTLYGFACDACSLEAVN 62


>ref|XP_002313460.1| predicted protein [Populus trichocarpa] gi|222849868|gb|EEE87415.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = -1

Query: 133 LVRPATEEFTKEAVTALRAGKVIAVPTDTLYGFACDACSLGAVN 2
           +VRPATE + +EA+ AL+AGKVIAVPTDTLYGFACDACSL AVN
Sbjct: 18  VVRPATEVYAQEAIEALKAGKVIAVPTDTLYGFACDACSLEAVN 61


>ref|XP_002879291.1| hypothetical protein ARALYDRAFT_482017 [Arabidopsis lyrata subsp.
           lyrata] gi|297325130|gb|EFH55550.1| hypothetical protein
           ARALYDRAFT_482017 [Arabidopsis lyrata subsp. lyrata]
          Length = 263

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
 Frame = -1

Query: 187 RKKMAWKCGAMAGPL--GPSLVRPATEEFTKEAVTALRAGKVIAVPTDTLYGFACDACSL 14
           +KKM W        +     LV PATE + +EA+ A+++ KVIAVPTDTLYGFACDACSL
Sbjct: 47  QKKMVWSLERAETCVVSNSCLVHPATEAYAQEAIEAIKSDKVIAVPTDTLYGFACDACSL 106

Query: 13  GAVN 2
            AVN
Sbjct: 107 EAVN 110


>ref|XP_003538209.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
           [Glycine max]
          Length = 290

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/43 (76%), Positives = 37/43 (86%)
 Frame = -1

Query: 130 VRPATEEFTKEAVTALRAGKVIAVPTDTLYGFACDACSLGAVN 2
           V PAT+ +  EAV AL+AGKVIAVPTDTLYGFACDACS+ AVN
Sbjct: 78  VHPATDAYAGEAVEALKAGKVIAVPTDTLYGFACDACSMEAVN 120


>ref|XP_003606393.1| YrdC domain-containing protein [Medicago truncatula]
           gi|355507448|gb|AES88590.1| YrdC domain-containing
           protein [Medicago truncatula]
          Length = 462

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -1

Query: 133 LVRPATEEFTKEAVTALRAGKVIAVPTDTLYGFACDACSLGAVN 2
           +V PAT+ +  EAV  L+AGKVIAVPTDTLYGFACDACSL AVN
Sbjct: 18  VVHPATDAYAAEAVETLKAGKVIAVPTDTLYGFACDACSLEAVN 61


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