BLASTX nr result

ID: Cnidium21_contig00005300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005300
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24211.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxido...   136   2e-30
ref|XP_002313368.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002298303.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersi...   122   2e-26

>emb|CBI24211.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/104 (63%), Positives = 79/104 (75%)
 Frame = -1

Query: 314 SPLQDSYRCMTALDGKTELQMISFQAPKIRLLRSFSFEVSGVNQVLDFAVFPEPEFDLPI 135
           SPLQ+++  M A+DGK +LQM+SFQAPKIRLLR+ S E S   Q+LDFAVFPE EFDLPI
Sbjct: 116 SPLQENFNSMMAMDGKAKLQMVSFQAPKIRLLRNLSIEASEGMQILDFAVFPEQEFDLPI 175

Query: 134 FCANFYSASNTNIVVLDLNPLHDVISNXXXXXXXXXKLIPLGLK 3
           FCANF++   TNI+VLDLNPLHDVI+           L+PLGLK
Sbjct: 176 FCANFFTTPTTNIIVLDLNPLHDVINRRDYKEKYYKSLMPLGLK 219


>ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxidoreductase,
           chloroplastic-like [Vitis vinifera]
          Length = 330

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/104 (63%), Positives = 79/104 (75%)
 Frame = -1

Query: 314 SPLQDSYRCMTALDGKTELQMISFQAPKIRLLRSFSFEVSGVNQVLDFAVFPEPEFDLPI 135
           SPLQ+++  M A+DGK +LQM+SFQAPKIRLLR+ S E S   Q+LDFAVFPE EFDLPI
Sbjct: 59  SPLQENFNSMMAMDGKAKLQMVSFQAPKIRLLRNLSIEASEGMQILDFAVFPEQEFDLPI 118

Query: 134 FCANFYSASNTNIVVLDLNPLHDVISNXXXXXXXXXKLIPLGLK 3
           FCANF++   TNI+VLDLNPLHDVI+           L+PLGLK
Sbjct: 119 FCANFFTTPTTNIIVLDLNPLHDVINRRDYKEKYYKSLMPLGLK 162


>ref|XP_002313368.1| predicted protein [Populus trichocarpa] gi|222849776|gb|EEE87323.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/104 (64%), Positives = 78/104 (75%)
 Frame = -1

Query: 314 SPLQDSYRCMTALDGKTELQMISFQAPKIRLLRSFSFEVSGVNQVLDFAVFPEPEFDLPI 135
           SPLQ+ Y  MTA+DG TELQM+SFQAPKIRLLRS S E   + Q+LDFAVF  PEFD+PI
Sbjct: 42  SPLQEKYSSMTAMDGTTELQMLSFQAPKIRLLRSLSIENEAM-QILDFAVFARPEFDVPI 100

Query: 134 FCANFYSASNTNIVVLDLNPLHDVISNXXXXXXXXXKLIPLGLK 3
           FCANF+S +  NI+VLDLNPLH+VI           +LIPLGLK
Sbjct: 101 FCANFFSTATINIIVLDLNPLHNVIDQRDYKEKYFKRLIPLGLK 144


>ref|XP_002298303.1| predicted protein [Populus trichocarpa] gi|222845561|gb|EEE83108.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/104 (61%), Positives = 78/104 (75%)
 Frame = -1

Query: 314 SPLQDSYRCMTALDGKTELQMISFQAPKIRLLRSFSFEVSGVNQVLDFAVFPEPEFDLPI 135
           SPLQ+ Y  MTA+DG TELQM+SFQAPK+RLLRS S E   + Q+LDFAVF  PEFD+PI
Sbjct: 42  SPLQEKYSSMTAMDGTTELQMLSFQAPKMRLLRSLSIENEAI-QILDFAVFSRPEFDVPI 100

Query: 134 FCANFYSASNTNIVVLDLNPLHDVISNXXXXXXXXXKLIPLGLK 3
           FCANF++ +  NI+VLDLNPLH+VI           +LIPLGL+
Sbjct: 101 FCANFFTTATMNIIVLDLNPLHNVIDQRNYKEKYFKRLIPLGLR 144


>ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersicum]
           gi|62149356|dbj|BAD93478.1| phytochromobilin synthase
           [Solanum lycopersicum] gi|62149358|dbj|BAD93479.1|
           phytochromobilin synthase [Solanum lycopersicum]
          Length = 342

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/104 (57%), Positives = 74/104 (71%)
 Frame = -1

Query: 314 SPLQDSYRCMTALDGKTELQMISFQAPKIRLLRSFSFEVSGVNQVLDFAVFPEPEFDLPI 135
           SPLQ+ Y  + ++D KTELQM+SF+A KIRLLRS   E +   QVLDFA FP+PEFDLPI
Sbjct: 77  SPLQEKYSSLLSMDDKTELQMLSFEAHKIRLLRSLCIEGTDGMQVLDFAAFPKPEFDLPI 136

Query: 134 FCANFYSASNTNIVVLDLNPLHDVISNXXXXXXXXXKLIPLGLK 3
           FCANF++ +  NI+VLDLNPLHD++            LI LGLK
Sbjct: 137 FCANFFTTAKMNIIVLDLNPLHDIMDQEDYKEKYYKDLITLGLK 180


Top