BLASTX nr result

ID: Cnidium21_contig00005273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005273
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314418.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002516784.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
ref|XP_002276672.1| PREDICTED: putative DUF21 domain-containing ...    69   5e-10
ref|XP_002965481.1| hypothetical protein SELMODRAFT_84781 [Selag...    68   9e-10
ref|XP_002868301.1| hypothetical protein ARALYDRAFT_493487 [Arab...    66   3e-09

>ref|XP_002314418.1| predicted protein [Populus trichocarpa] gi|222863458|gb|EEF00589.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/86 (50%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
 Frame = -1

Query: 252 MKLMNFLLIMAMSPELTGESSS--IEFGTFLWYLYAGISCFLVLFAXXXXXXXXXXXXXX 79
           M+L+N ++   M  EL G+S+   I FG+F W+ YAGISCFLVLFA              
Sbjct: 1   MQLLNAVMATRMLTELGGQSNGDEIPFGSFSWFAYAGISCFLVLFAGIMSGLTLGLMSLG 60

Query: 78  XXXXEILQRSGTPKEKEQAAVILPVV 1
               EILQRSGT  EK+QAA ILPVV
Sbjct: 61  LVDLEILQRSGTSTEKKQAAAILPVV 86


>ref|XP_002516784.1| conserved hypothetical protein [Ricinus communis]
           gi|223543872|gb|EEF45398.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 502

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
 Frame = -1

Query: 252 MKLMNFLL---IMAMSPELTGESSSIEFGTFLWYLYAGISCFLVLFAXXXXXXXXXXXXX 82
           M L+N ++   ++ M  +  G S  I FG+  W++YAGISCFLVLFA             
Sbjct: 1   MHLVNAVMATRMLTMLGQSNGVSEGIPFGSIWWFIYAGISCFLVLFAGIMSGLTLGLMSL 60

Query: 81  XXXXXEILQRSGTPKEKEQAAVILPVV 1
                EILQRSGT  EK+QAA ILPVV
Sbjct: 61  GLVELEILQRSGTSSEKKQAAAILPVV 87


>ref|XP_002276672.1| PREDICTED: putative DUF21 domain-containing protein At1g03270
           [Vitis vinifera]
          Length = 504

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
 Frame = -1

Query: 252 MKLMNFLLIMAM--SPELTGESSSIEFGTFLWYLYAGISCFLVLFAXXXXXXXXXXXXXX 79
           M L+N L + +M  + E    +  IEFG+  W++YAG+SCFLVLFA              
Sbjct: 1   MSLLNALTLGSMPTTGEFVLRTEDIEFGSLWWFVYAGVSCFLVLFAGIMSGLTLGLMSLG 60

Query: 78  XXXXEILQRSGTPKEKEQAAVILPVV 1
               EILQRSGT  EK+QAA ILPVV
Sbjct: 61  LVELEILQRSGTSAEKKQAAAILPVV 86


>ref|XP_002965481.1| hypothetical protein SELMODRAFT_84781 [Selaginella moellendorffii]
           gi|302823107|ref|XP_002993208.1| hypothetical protein
           SELMODRAFT_136713 [Selaginella moellendorffii]
           gi|300138978|gb|EFJ05728.1| hypothetical protein
           SELMODRAFT_136713 [Selaginella moellendorffii]
           gi|300166295|gb|EFJ32901.1| hypothetical protein
           SELMODRAFT_84781 [Selaginella moellendorffii]
          Length = 419

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/77 (49%), Positives = 45/77 (58%)
 Frame = -1

Query: 231 LIMAMSPELTGESSSIEFGTFLWYLYAGISCFLVLFAXXXXXXXXXXXXXXXXXXEILQR 52
           +++A S  L  E   + FGT LWY+YAGIS FLV+FA                  E+LQR
Sbjct: 1   MVLATSTRLRAED--VPFGTGLWYIYAGISTFLVVFAGLMSGLTLGLMSLGVVDLEVLQR 58

Query: 51  SGTPKEKEQAAVILPVV 1
           SGTPKEK QAA I PVV
Sbjct: 59  SGTPKEKRQAAAIFPVV 75


>ref|XP_002868301.1| hypothetical protein ARALYDRAFT_493487 [Arabidopsis lyrata subsp.
           lyrata] gi|297314137|gb|EFH44560.1| hypothetical protein
           ARALYDRAFT_493487 [Arabidopsis lyrata subsp. lyrata]
          Length = 497

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/66 (54%), Positives = 40/66 (60%)
 Frame = -1

Query: 198 ESSSIEFGTFLWYLYAGISCFLVLFAXXXXXXXXXXXXXXXXXXEILQRSGTPKEKEQAA 19
           ES +I FG+  W  YAGISCFLVLFA                  EILQRSGTPKEK+Q+A
Sbjct: 23  ESEAIPFGSLEWITYAGISCFLVLFAGIMSGLTLGLMSLGLVELEILQRSGTPKEKKQSA 82

Query: 18  VILPVV 1
            I PVV
Sbjct: 83  AIFPVV 88


Top