BLASTX nr result

ID: Cnidium21_contig00005272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005272
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...   210   5e-52
ref|XP_002523851.1| conserved hypothetical protein [Ricinus comm...   207   3e-51
ref|XP_003553607.1| PREDICTED: probable F-box protein At1g60180-...   195   1e-47
ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-...   195   2e-47
ref|XP_004140262.1| PREDICTED: probable F-box protein At1g60180-...   195   2e-47

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score =  210 bits (534), Expect = 5e-52
 Identities = 110/255 (43%), Positives = 163/255 (63%), Gaps = 7/255 (2%)
 Frame = +1

Query: 247 TTIAALDSDIMETHILTKFDGPSLASLASTCNLLHTLCNKESLWKDICNSTWNSIKHPLV 426
           TTI ++  DI++THILT+ DGP+LA+  +  + LH L   + LW+DIC STW S+  P +
Sbjct: 6   TTITSVHPDIIQTHILTRLDGPTLAAAGAASSQLHALATVDKLWRDICTSTWPSLNDPTL 65

Query: 427 RQTISSFPGSYRSFYSDSFPVLSAT------KSSRGSPGGRVQTSKLISAVDVHYGNNPV 588
           +  +S+FPG +RSF+SDS+P+L+        +S +  P     T +LISAVD+HY N+ +
Sbjct: 66  QALVSAFPGGHRSFFSDSYPLLAHPLDQYHGQSRKIPPTTSSPTLELISAVDIHYKNSLI 125

Query: 589 YSKVIVTNTDDSSFPESLFLVDLIDHKETVEMPLRYEGD-ENMCISELEENLRLSWIVID 765
           +SKV  T T    F  S F VDL+D K+TV  P++Y  D +   +S LE+ L LSWI+ID
Sbjct: 126 FSKVEATETITGWFQCSPFRVDLLDPKDTVPTPVQYSVDGDYKWLSHLEDTLTLSWILID 185

Query: 766 PTLKRAGNVSSLRPVSVRPHWDKSGIEVTYATIISGDCSDTDTTEFVECRVEALFGCEQG 945
           PT KRA N+SSLRPVSV+ HW    ++V YAT++ GD   T  +E V+C +      ++G
Sbjct: 186 PTRKRAANLSSLRPVSVKRHWLTGEVQVRYATVVGGD--RTVGSEVVQCGIVVTCAGKEG 243

Query: 946 NNIELKELGFCLVDM 990
             ++++E+   + DM
Sbjct: 244 GEMQVREVNLQVEDM 258


>ref|XP_002523851.1| conserved hypothetical protein [Ricinus communis]
           gi|223536939|gb|EEF38577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 338

 Score =  207 bits (527), Expect = 3e-51
 Identities = 110/259 (42%), Positives = 166/259 (64%), Gaps = 1/259 (0%)
 Frame = +1

Query: 217 SSSLNQGGAGTTIAALDSDIMETHILTKFDGPSLASLASTCNLLHTLCNKESLWKDICNS 396
           SS+L+    GT I+ +  DI++THILT+ DGP+LASL+   +  HTL +++ LW++IC+ 
Sbjct: 5   SSTLHHHENGT-ISTVHHDILQTHILTRLDGPTLASLSCASSDFHTLSSQDKLWQNICSF 63

Query: 397 TWNSIKHPLVRQTISSFPGSYRSFYSDSFPVLSATKSS-RGSPGGRVQTSKLISAVDVHY 573
           TW S   PL+   ISSFP  +RSF+SDSFP+L   + + R  P     T++LISAVD++Y
Sbjct: 64  TWPSTNDPLLSSVISSFPSGHRSFFSDSFPLLRHHRPTCRTLPTPFPSTTELISAVDIYY 123

Query: 574 GNNPVYSKVIVTNTDDSSFPESLFLVDLIDHKETVEMPLRYEGDENMCISELEENLRLSW 753
            N P++SKV  T T    F  S F +DL++ KE V   ++  G+++  + +LEE++ LSW
Sbjct: 124 RNVPIFSKVEKTETVSRWFLCSPFRIDLLEPKEFVPTWIQKAGEKDSWLKQLEEDVTLSW 183

Query: 754 IVIDPTLKRAGNVSSLRPVSVRPHWDKSGIEVTYATIISGDCSDTDTTEFVECRVEALFG 933
           I+IDP  KRA N+SS RPVSV+ HW    ++  +ATI +GD      TE+VEC V    G
Sbjct: 184 ILIDPEQKRAVNISSKRPVSVQRHWLTGEVQAKFATIFAGDRGKGSETEYVECEVVVTCG 243

Query: 934 CEQGNNIELKELGFCLVDM 990
            ++G  + ++++   + DM
Sbjct: 244 GKEGGEVRVRDVSMGMEDM 262


>ref|XP_003553607.1| PREDICTED: probable F-box protein At1g60180-like [Glycine max]
          Length = 335

 Score =  195 bits (496), Expect = 1e-47
 Identities = 108/246 (43%), Positives = 147/246 (59%)
 Frame = +1

Query: 202 LDKMSSSSLNQGGAGTTIAALDSDIMETHILTKFDGPSLASLASTCNLLHTLCNKESLWK 381
           +D  +++S ++ G  TTI A+  DI++THILT  DGPSLAS+ASTC+ LH L  +E LW+
Sbjct: 4   IDNTATTSTDEAGGATTITAVHPDIIQTHILTCLDGPSLASVASTCSQLHALSAREPLWE 63

Query: 382 DICNSTWNSIKHPLVRQTISSFPGSYRSFYSDSFPVLSATKSSRGSPGGRVQTSKLISAV 561
           +IC+STW S   P VR  +S+FP +  SF+SDSFP  +A +      G   +  +LISAV
Sbjct: 64  NICHSTWPSTSSPRVRHVMSTFPRASLSFFSDSFPSFAAARE-----GSSSRAPELISAV 118

Query: 562 DVHYGNNPVYSKVIVTNTDDSSFPESLFLVDLIDHKETVEMPLRYEGDENMCISELEENL 741
           D+ +    V S+V+ T T+   F  S F +D++D KE V   + Y   E  C   L E+L
Sbjct: 119 DIFHRRRAVLSRVVETETESDWFRCSPFRIDVLDQKEAVATAMEYPRSEEAC-EILGEDL 177

Query: 742 RLSWIVIDPTLKRAGNVSSLRPVSVRPHWDKSGIEVTYATIISGDCSDTDTTEFVECRVE 921
           RLSWIV+DP  KRA NVSS R VSV  HW    ++  +AT++ G    T   E   C V 
Sbjct: 178 RLSWIVVDPNGKRAVNVSSGRVVSVERHWLSGEVKARFATVVGGGERGT-AVEVALCSVT 236

Query: 922 ALFGCE 939
             FG E
Sbjct: 237 VTFGGE 242


>ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-like, partial [Cucumis
           sativus]
          Length = 320

 Score =  195 bits (495), Expect = 2e-47
 Identities = 104/248 (41%), Positives = 149/248 (60%), Gaps = 2/248 (0%)
 Frame = +1

Query: 253 IAALDSDIMETHILTKFDGPSLASLASTCNLLHTLCNKESLWKDICNSTWNSIKHPLVRQ 432
           IAAL SDI++THILT+ DG +L S AST +   +L +++ LW+ +C+++W SI HP ++Q
Sbjct: 14  IAALHSDILQTHILTRLDGAALTSTASTSSRFRSLSSEDQLWRRVCSTSWPSITHPKLQQ 73

Query: 433 TISSFPGSYRSFYSDSFPVLSATKSSRGSPGGRVQTSKLISAVDVHYGNNPVYSKVIVTN 612
            IS+FP  ++SF+SD FPVL               T +LISAVD+HY N  ++SKV    
Sbjct: 74  LISAFPSKHQSFFSDVFPVLDCCSLRCDLDYRYSTTVELISAVDIHYKNKLLFSKVHSIE 133

Query: 613 TDDSSFPESLFLVDLIDHKETVEMPLRYEGDENMCISELEENLRLSWIVIDPTLKRAGNV 792
           T+ + F  S F VDLID K+++  P+R        +  LEENL +SW++IDP   RA N+
Sbjct: 134 TETNWFLCSPFRVDLIDPKDSIPSPIRRSEKYEDWLGHLEENLTVSWVIIDPIKNRAANI 193

Query: 793 SSLRPVSVRPHWDKSGIEVTYATIISGDCSDTDTTEFVECRVEALFG--CEQGNNIELKE 966
           SS +PV VR HW    I+V Y T++ GD       E VEC V    G   E+G  + + E
Sbjct: 194 SSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVVVSCGEKEEEGMEMSVTE 253

Query: 967 LGFCLVDM 990
           +   ++DM
Sbjct: 254 VSMQMLDM 261


>ref|XP_004140262.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 321

 Score =  195 bits (495), Expect = 2e-47
 Identities = 104/248 (41%), Positives = 149/248 (60%), Gaps = 2/248 (0%)
 Frame = +1

Query: 253 IAALDSDIMETHILTKFDGPSLASLASTCNLLHTLCNKESLWKDICNSTWNSIKHPLVRQ 432
           IAAL SDI++THILT+ DG +L S AST +   +L +++ LW+ +C+++W SI HP ++Q
Sbjct: 14  IAALHSDILQTHILTRLDGAALTSTASTSSRFRSLSSEDQLWRRVCSTSWPSITHPKLQQ 73

Query: 433 TISSFPGSYRSFYSDSFPVLSATKSSRGSPGGRVQTSKLISAVDVHYGNNPVYSKVIVTN 612
            IS+FP  ++SF+SD FPVL               T +LISAVD+HY N  ++SKV    
Sbjct: 74  LISAFPSKHQSFFSDVFPVLDCCSLRCDLDYRYSTTVELISAVDIHYKNKLLFSKVHSIE 133

Query: 613 TDDSSFPESLFLVDLIDHKETVEMPLRYEGDENMCISELEENLRLSWIVIDPTLKRAGNV 792
           T+ + F  S F VDLID K+++  P+R        +  LEENL +SW++IDP   RA N+
Sbjct: 134 TETNWFLCSPFRVDLIDPKDSIPSPIRRSEKYEDWLGHLEENLTVSWVIIDPIKNRAANI 193

Query: 793 SSLRPVSVRPHWDKSGIEVTYATIISGDCSDTDTTEFVECRVEALFG--CEQGNNIELKE 966
           SS +PV VR HW    I+V Y T++ GD       E VEC V    G   E+G  + + E
Sbjct: 194 SSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVVVSCGEKEEEGMEMSVTE 253

Query: 967 LGFCLVDM 990
           +   ++DM
Sbjct: 254 VSMQMLDM 261


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