BLASTX nr result

ID: Cnidium21_contig00005270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005270
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...    80   1e-13
ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-...    75   5e-12
ref|XP_004140262.1| PREDICTED: probable F-box protein At1g60180-...    75   5e-12
ref|XP_002523851.1| conserved hypothetical protein [Ricinus comm...    73   3e-11
ref|XP_002523850.1| conserved hypothetical protein [Ricinus comm...    71   9e-11

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 49/108 (45%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
 Frame = -1

Query: 536 AANLSSLKPVSVRPHWDGNAIKVIYATLLSAACCGIDTT---EFVECRIVAFFGFEQGKK 366
           AANLSSL+PVSV+ HW    ++V YAT++     G D T   E V+C IV     ++G +
Sbjct: 191 AANLSSLRPVSVKRHWLTGEVQVRYATVV-----GGDRTVGSEVVQCGIVVTCAGKEGGE 245

Query: 365 LQLKELSLCVVDMVRTRLNGEKSLTILKGAMESGQRKKENG-DGKNMY 225
           +Q++E++L V DM    LNG++SL IL+ A+E+G+RKK  G +GK  Y
Sbjct: 246 MQVREVNLQVEDMEGRHLNGKESLVILQEALENGRRKKAKGEEGKARY 293


>ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-like, partial [Cucumis
           sativus]
          Length = 320

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
 Frame = -1

Query: 536 AANLSSLKPVSVRPHWDGNAIKVIYATLLSAACCGIDTTEFVECRIVAFFG--FEQGKKL 363
           AAN+SS +PV VR HW    I+V Y T++          E VEC +V   G   E+G ++
Sbjct: 190 AANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVVVSCGEKEEEGMEM 249

Query: 362 QLKELSLCVVDMVRTRLNGEKSLTILKGAMESGQR-KKENGDGKNMY 225
            + E+S+ ++DM    LNG+ SL ILK AME G+R   + GDGK  Y
Sbjct: 250 SVTEVSMQMLDMEGKHLNGKDSLGILKEAMEKGKRISAKKGDGKLRY 296


>ref|XP_004140262.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 321

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
 Frame = -1

Query: 536 AANLSSLKPVSVRPHWDGNAIKVIYATLLSAACCGIDTTEFVECRIVAFFG--FEQGKKL 363
           AAN+SS +PV VR HW    I+V Y T++          E VEC +V   G   E+G ++
Sbjct: 190 AANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVVVSCGEKEEEGMEM 249

Query: 362 QLKELSLCVVDMVRTRLNGEKSLTILKGAMESGQR-KKENGDGKNMY 225
            + E+S+ ++DM    LNG+ SL ILK AME G+R   + GDGK  Y
Sbjct: 250 SVTEVSMQMLDMEGKHLNGKDSLGILKEAMEKGKRISAKKGDGKLRY 296


>ref|XP_002523851.1| conserved hypothetical protein [Ricinus communis]
           gi|223536939|gb|EEF38577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 338

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/104 (37%), Positives = 63/104 (60%)
 Frame = -1

Query: 536 AANLSSLKPVSVRPHWDGNAIKVIYATLLSAACCGIDTTEFVECRIVAFFGFEQGKKLQL 357
           A N+SS +PVSV+ HW    ++  +AT+ +        TE+VEC +V   G ++G ++++
Sbjct: 193 AVNISSKRPVSVQRHWLTGEVQAKFATIFAGDRGKGSETEYVECEVVVTCGGKEGGEVRV 252

Query: 356 KELSLCVVDMVRTRLNGEKSLTILKGAMESGQRKKENGDGKNMY 225
           +++S+ + DM    L GE SL ILK A E G+R++   DGK  Y
Sbjct: 253 RDVSMGMEDMEGKALTGEDSLVILKEATERGERRR-GEDGKERY 295


>ref|XP_002523850.1| conserved hypothetical protein [Ricinus communis]
           gi|223536938|gb|EEF38576.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
 Frame = -1

Query: 536 AANLSSLKPVSVRPHWDGNAIKVIYATLLSAACCGIDTTE--FVECRIVAFFGFEQGKKL 363
           A NLSS + VSV+ HW    + V +AT+L+    GI  +E  +VEC +V   G ++G+++
Sbjct: 194 AMNLSSKRAVSVQRHWLTGEVLVKFATILA----GIKGSEKEYVECEMVVTCGGKEGEEV 249

Query: 362 QLKELSLCVVDMVRTRLNGEKSLTILKGAMESGQRKKENGDGKNMY 225
           +++++S+ + DM    L G+ SL IL GAME G+R+K   DGK  Y
Sbjct: 250 RVRDVSMRMDDMEGRSLTGKDSLVILNGAMERGERRK-GEDGKERY 294


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