BLASTX nr result

ID: Cnidium21_contig00005264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005264
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526864.1| eukaryotic translation initiation factor 3f,...   264   5e-69
ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation...   264   6e-69
ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation...   258   4e-67
ref|XP_003538452.1| PREDICTED: eukaryotic translation initiation...   255   2e-66
gb|ACU17945.1| unknown [Glycine max]                                  255   2e-66

>ref|XP_002526864.1| eukaryotic translation initiation factor 3f, eif3f, putative
           [Ricinus communis] gi|223533763|gb|EEF35495.1|
           eukaryotic translation initiation factor 3f, eif3f,
           putative [Ricinus communis]
          Length = 287

 Score =  264 bits (675), Expect = 5e-69
 Identities = 130/148 (87%), Positives = 135/148 (91%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 MASSELTVLQFT--PSPTSLSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTV 266
           MA+SE TVLQFT  PS T LSAKVHPLVIFNICDC+VRRPDQAERVIGTLLGSVLPDGTV
Sbjct: 1   MAASEQTVLQFTSAPSSTGLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTV 60

Query: 265 DIRNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKEVIVGWFSTGFGVTGGSALIHEF 86
           DIRNSYAVPHNES DQVALDIDYHHNML SHQKVNPKEVIVGW+STG GVTGGSALIHEF
Sbjct: 61  DIRNSYAVPHNESSDQVALDIDYHHNMLLSHQKVNPKEVIVGWYSTGLGVTGGSALIHEF 120

Query: 85  YSREATNPVHLTVDTGFTNGDATIKGFV 2
           YSRE  NPVHLTVDTGF NG+ TIK +V
Sbjct: 121 YSREVPNPVHLTVDTGFRNGEGTIKAYV 148


>ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation factor 3 subunit F
           [Vitis vinifera] gi|296086088|emb|CBI31529.3| unnamed
           protein product [Vitis vinifera]
          Length = 285

 Score =  264 bits (674), Expect = 6e-69
 Identities = 128/146 (87%), Positives = 133/146 (91%)
 Frame = -3

Query: 439 MASSELTVLQFTPSPTSLSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTVDI 260
           MASSE  VLQF PS TSLSAKVHPLVIFNICDC+VRRPDQAERVIGTLLGS+ PDGTVDI
Sbjct: 1   MASSESAVLQFFPSSTSLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSISPDGTVDI 60

Query: 259 RNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKEVIVGWFSTGFGVTGGSALIHEFYS 80
           RNSYAVPHNES DQVALDIDYHHNML SHQKVNPKEVIVGW+STG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNESSDQVALDIDYHHNMLLSHQKVNPKEVIVGWYSTGLGVTGGSALIHEFYS 120

Query: 79  REATNPVHLTVDTGFTNGDATIKGFV 2
           RE  NP+HLTVDT F NG+ATIK FV
Sbjct: 121 REVQNPIHLTVDTTFRNGEATIKAFV 146


>ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           F-like [Cucumis sativus]
           gi|449517876|ref|XP_004165970.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit F-like [Cucumis
           sativus]
          Length = 285

 Score =  258 bits (659), Expect = 4e-67
 Identities = 122/146 (83%), Positives = 134/146 (91%)
 Frame = -3

Query: 439 MASSELTVLQFTPSPTSLSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTVDI 260
           MA++E TVLQF+ S  +LSAKVHPLVIFNICDC+VRRPDQA+RVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSHSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 259 RNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKEVIVGWFSTGFGVTGGSALIHEFYS 80
           RNSYAVPHNE  DQVALDIDYHHNML+SHQKVNPKEVIVGW+STG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 79  REATNPVHLTVDTGFTNGDATIKGFV 2
           RE  NP+HLTVDTGF NG+ TIK ++
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYI 146


>ref|XP_003538452.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           F-like [Glycine max]
          Length = 288

 Score =  255 bits (652), Expect = 2e-66
 Identities = 123/149 (82%), Positives = 136/149 (91%), Gaps = 3/149 (2%)
 Frame = -3

Query: 439 MASSELTVLQFTPSPTS---LSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGT 269
           MA+S+ TVLQF+ S +S   LSAKVHPLVIFNICDC+VRRPDQA+RVIGTLLGSVLPDGT
Sbjct: 1   MAASDRTVLQFSSSSSSSQSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGT 60

Query: 268 VDIRNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKEVIVGWFSTGFGVTGGSALIHE 89
           VDIRNSYAVPHNES++QVALDI+YHHNML SHQKVNPKE+IVGW+STG GVTGGSALIHE
Sbjct: 61  VDIRNSYAVPHNESIEQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHE 120

Query: 88  FYSREATNPVHLTVDTGFTNGDATIKGFV 2
           FYSRE  NP+HLTVDTGFTNG  TIK +V
Sbjct: 121 FYSREVPNPIHLTVDTGFTNGAGTIKAYV 149


>gb|ACU17945.1| unknown [Glycine max]
          Length = 210

 Score =  255 bits (652), Expect = 2e-66
 Identities = 123/149 (82%), Positives = 136/149 (91%), Gaps = 3/149 (2%)
 Frame = -3

Query: 439 MASSELTVLQFTPSPTS---LSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGT 269
           MA+S+ TVLQF+ S +S   LSAKVHPLVIFNICDC+VRRPDQA+RVIGTLLGSVLPDGT
Sbjct: 1   MAASDRTVLQFSSSSSSSQSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGT 60

Query: 268 VDIRNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKEVIVGWFSTGFGVTGGSALIHE 89
           VDIRNSYAVPHNES++QVALDI+YHHNML SHQKVNPKE+IVGW+STG GVTGGSALIHE
Sbjct: 61  VDIRNSYAVPHNESIEQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHE 120

Query: 88  FYSREATNPVHLTVDTGFTNGDATIKGFV 2
           FYSRE  NP+HLTVDTGFTNG  TIK +V
Sbjct: 121 FYSREVPNPIHLTVDTGFTNGAGTIKAYV 149


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