BLASTX nr result

ID: Cnidium21_contig00005261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005261
         (985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301615.1| predicted protein [Populus trichocarpa] gi|2...    43   6e-11
ref|XP_002270552.1| PREDICTED: uncharacterized protein LOC100261...    44   3e-08

>ref|XP_002301615.1| predicted protein [Populus trichocarpa] gi|222843341|gb|EEE80888.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score = 42.7 bits (99), Expect(3) = 6e-11
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = -2

Query: 408 EDGAAPNATTSPKNGVEILMSQMHDLSFMLERALRVPLKLD 286
           ED      T S  + VE+LMSQMHDLSFMLE  L VP K++
Sbjct: 470 EDLKKGENTRSKADEVEMLMSQMHDLSFMLESNLSVPQKIE 510



 Score = 38.9 bits (89), Expect(3) = 6e-11
 Identities = 21/47 (44%), Positives = 26/47 (55%)
 Frame = -3

Query: 653 SGNA*KDKNHQKAVSSEQTFEINSFSASGYIQDNEFGSFSYPNIFSG 513
           S N+ K   +    S +Q  EIN F  S   QD +FGSFS P+ FSG
Sbjct: 389 SNNSLKQDANHILPSVDQESEINLFGGSSISQDVDFGSFSQPDFFSG 435



 Score = 31.6 bits (70), Expect(3) = 6e-11
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 888 NWNDFASLRNAVNLSGDEPSGKIIDKPDDSFGGWNDFASSS 766
           +W +    +       DE   K ID+ DDSF  WNDF+ S+
Sbjct: 345 DWIEDNQWQTTTTSKSDE--NKTIDENDDSFDAWNDFSGST 383


>ref|XP_002270552.1| PREDICTED: uncharacterized protein LOC100261856 [Vitis vinifera]
           gi|297739184|emb|CBI28835.3| unnamed protein product
           [Vitis vinifera]
          Length = 514

 Score = 43.9 bits (102), Expect(3) = 3e-08
 Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
 Frame = -2

Query: 453 SERNNNDKSHIKELPEDGAAPNATTSPK-NGVEILMSQMHDLSFMLERALRVP 298
           ++ +  D   +++  +D    +ATTS K   VE+LMSQMHDLSFMLE  L VP
Sbjct: 460 ADTSAEDGGRLEQSVKDEDILDATTSSKAEDVEMLMSQMHDLSFMLESKLSVP 512



 Score = 30.4 bits (67), Expect(3) = 3e-08
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = -3

Query: 611 SSEQTFEINSFSASGYIQDNEFGSFSYPNIFSGFHGVHDGDASNETSSVKFMLQKGTTMT 432
           S EQT E N  S++  +Q+ EFG+FS     S   G  +    N++S+V  ML + +   
Sbjct: 402 SVEQTSEPNLLSSTSNLQEMEFGNFSQQEDLSS--GADNN--QNDSSTVSNMLPEASDSN 457

Query: 431 R 429
           R
Sbjct: 458 R 458



 Score = 29.6 bits (65), Expect(3) = 3e-08
 Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
 Frame = -2

Query: 972 DFASSSDAVNFSG-DEPSSKITDKPDDTFNWNDFASLRNAVNLSGDEPS------GKIID 814
           D +S  DAV  SG D  S+ ++D        ND+       NL+   P+        I  
Sbjct: 269 DLSSHMDAVFGSGKDINSAHVSDDTTPASRTNDWIQDDLYKNLNSKVPAHVGQVDSTIQA 328

Query: 813 KPDDSFGG----WNDFASSSQNVNLSGNKPSSKI-IDKPSDPFDDWNDFAST 673
           +   +  G     ND+    Q  N S     +KI + K  + FD WNDF S+
Sbjct: 329 EDAQNLAGPSSTRNDWFQDDQWKNSSAKSTDNKIALGKNDNLFDAWNDFPSS 380


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