BLASTX nr result

ID: Cnidium21_contig00005257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005257
         (1053 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264308.1| PREDICTED: KH domain-containing protein At2g...   333   3e-89
emb|CAN61397.1| hypothetical protein VITISV_015779 [Vitis vinifera]   333   3e-89
ref|XP_003552330.1| PREDICTED: KH domain-containing protein At2g...   325   1e-86
ref|XP_002326275.1| predicted protein [Populus trichocarpa] gi|2...   323   3e-86
ref|XP_002323686.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86

>ref|XP_002264308.1| PREDICTED: KH domain-containing protein At2g38610 [Vitis vinifera]
           gi|297745739|emb|CBI15795.3| unnamed protein product
           [Vitis vinifera]
          Length = 281

 Score =  333 bits (855), Expect = 3e-89
 Identities = 163/208 (78%), Positives = 183/208 (87%)
 Frame = +3

Query: 3   RGSPNPSNSLEVLPDIGGKGLNIWNGNGWKGLQRERVGGPLGMTNDWQAAPGSPSSFMVK 182
           RGSP+P  S E++P+I G  L      GW GL  ER+GGP GMT DWQA PGSPSS++VK
Sbjct: 78  RGSPSPLGSSEMMPNIRGTSLG-----GWNGLPHERLGGPQGMTMDWQAPPGSPSSYIVK 132

Query: 183 RILRLDIPVGNYPNFNFVGRLLGPRGNSLKRVEASTGCRVFIRGKGSIKDPDKEESLRGR 362
           +ILRL+IPV +YPNFNFVGRLLGPRGNSLKRVEASTGCRV+IRGKGSIKDPDKEE LRGR
Sbjct: 133 KILRLEIPVDSYPNFNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGSIKDPDKEEELRGR 192

Query: 363 PGYEHLNEQLHILIEAELPANVVDVRLRQAQDIIEELLKPVDESHDLYKRQQLRELAMLN 542
           PGYEHLN+ L+ILIEAELP ++VDV+LR+AQ+IIEELLKPVDESHD YKRQQLRELA+LN
Sbjct: 193 PGYEHLNDPLYILIEAELPVSIVDVQLRRAQEIIEELLKPVDESHDFYKRQQLRELALLN 252

Query: 543 SNFREESPQPRASVSPFNSSGMKRAKTG 626
           SNFREESPQPR S SPF+SSGMKRAKTG
Sbjct: 253 SNFREESPQPRGSASPFSSSGMKRAKTG 280


>emb|CAN61397.1| hypothetical protein VITISV_015779 [Vitis vinifera]
          Length = 281

 Score =  333 bits (855), Expect = 3e-89
 Identities = 163/208 (78%), Positives = 183/208 (87%)
 Frame = +3

Query: 3   RGSPNPSNSLEVLPDIGGKGLNIWNGNGWKGLQRERVGGPLGMTNDWQAAPGSPSSFMVK 182
           RGSP+P  S E++P+I G  L      GW GL  ER+GGP GMT DWQA PGSPSS++VK
Sbjct: 78  RGSPSPLGSSEMMPNIRGTSLG-----GWNGLPHERLGGPQGMTMDWQAPPGSPSSYIVK 132

Query: 183 RILRLDIPVGNYPNFNFVGRLLGPRGNSLKRVEASTGCRVFIRGKGSIKDPDKEESLRGR 362
           +ILRL+IPV +YPNFNFVGRLLGPRGNSLKRVEASTGCRV+IRGKGSIKDPDKEE LRGR
Sbjct: 133 KILRLEIPVDSYPNFNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGSIKDPDKEEELRGR 192

Query: 363 PGYEHLNEQLHILIEAELPANVVDVRLRQAQDIIEELLKPVDESHDLYKRQQLRELAMLN 542
           PGYEHLN+ L+ILIEAELP ++VDV+LR+AQ+IIEELLKPVDESHD YKRQQLRELA+LN
Sbjct: 193 PGYEHLNDPLYILIEAELPVSIVDVQLRRAQEIIEELLKPVDESHDFYKRQQLRELALLN 252

Query: 543 SNFREESPQPRASVSPFNSSGMKRAKTG 626
           SNFREESPQPR S SPF+SSGMKRAKTG
Sbjct: 253 SNFREESPQPRGSASPFSSSGMKRAKTG 280


>ref|XP_003552330.1| PREDICTED: KH domain-containing protein At2g38610-like [Glycine
           max]
          Length = 281

 Score =  325 bits (832), Expect = 1e-86
 Identities = 163/206 (79%), Positives = 176/206 (85%)
 Frame = +3

Query: 9   SPNPSNSLEVLPDIGGKGLNIWNGNGWKGLQRERVGGPLGMTNDWQAAPGSPSSFMVKRI 188
           SP+P  S  ++ ++ G GL      GW  LQ+ER+ GP GMT DWQ+AP SPSSF VKRI
Sbjct: 80  SPSPMASSNLMSNVSGTGLG-----GWNSLQQERLCGPPGMTMDWQSAPASPSSFTVKRI 134

Query: 189 LRLDIPVGNYPNFNFVGRLLGPRGNSLKRVEASTGCRVFIRGKGSIKDPDKEESLRGRPG 368
           LRL+IPV  YPNFNFVGRLLGPRGNSLKRVEA+TGCRV+IRGKGSIKDPDKEE LRGRPG
Sbjct: 135 LRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPG 194

Query: 369 YEHLNEQLHILIEAELPANVVDVRLRQAQDIIEELLKPVDESHDLYKRQQLRELAMLNSN 548
           YEHLNE LHILIEAELPANVVD+RLRQAQ+IIEELLKPVDES D  KRQQLRELAMLNSN
Sbjct: 195 YEHLNEPLHILIEAELPANVVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSN 254

Query: 549 FREESPQPRASVSPFNSSGMKRAKTG 626
           FREESP P  SVSPFNSSGMKRAKTG
Sbjct: 255 FREESPGPSGSVSPFNSSGMKRAKTG 280


>ref|XP_002326275.1| predicted protein [Populus trichocarpa] gi|222833468|gb|EEE71945.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  323 bits (829), Expect = 3e-86
 Identities = 159/206 (77%), Positives = 177/206 (85%)
 Frame = +3

Query: 9   SPNPSNSLEVLPDIGGKGLNIWNGNGWKGLQRERVGGPLGMTNDWQAAPGSPSSFMVKRI 188
           SP+P  S  +L ++GG GL+     GW G+ +ER+ GP GMT DWQ AP SPSS+ VKRI
Sbjct: 80  SPSPMASSNLLSNVGGTGLS-----GWNGIPQERLSGPPGMTMDWQGAPASPSSYTVKRI 134

Query: 189 LRLDIPVGNYPNFNFVGRLLGPRGNSLKRVEASTGCRVFIRGKGSIKDPDKEESLRGRPG 368
           LRL+IPV  YPNFNFVGRLLGPRGNSLKRVEA+TGCRV+IRGKGSIKDPDKEE LRGRPG
Sbjct: 135 LRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPG 194

Query: 369 YEHLNEQLHILIEAELPANVVDVRLRQAQDIIEELLKPVDESHDLYKRQQLRELAMLNSN 548
           YEHLN+ LHILIEA+LPAN+VD+RLRQAQ+IIEELLKPVDES D  KRQQLRELAMLNSN
Sbjct: 195 YEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSN 254

Query: 549 FREESPQPRASVSPFNSSGMKRAKTG 626
           FREESP P  SVSPFN+SGMKRAKTG
Sbjct: 255 FREESPGPSGSVSPFNTSGMKRAKTG 280


>ref|XP_002323686.1| predicted protein [Populus trichocarpa] gi|222868316|gb|EEF05447.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  323 bits (828), Expect = 4e-86
 Identities = 159/206 (77%), Positives = 176/206 (85%)
 Frame = +3

Query: 9   SPNPSNSLEVLPDIGGKGLNIWNGNGWKGLQRERVGGPLGMTNDWQAAPGSPSSFMVKRI 188
           SP+P  S  ++ ++GG GL      GW GL +ER+ GP GMT DWQ AP SPSSF VKRI
Sbjct: 80  SPSPMASSNLISNVGGTGLG-----GWNGLPQERLSGPPGMTMDWQGAPASPSSFTVKRI 134

Query: 189 LRLDIPVGNYPNFNFVGRLLGPRGNSLKRVEASTGCRVFIRGKGSIKDPDKEESLRGRPG 368
           LRL+IPV  YPNFNFVGRLLGPRGNSLKRVEA+TGCRV+IRGKGSIKDPDKEE L+GRPG
Sbjct: 135 LRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLKGRPG 194

Query: 369 YEHLNEQLHILIEAELPANVVDVRLRQAQDIIEELLKPVDESHDLYKRQQLRELAMLNSN 548
           YEHLN+ LHILIEA+LPAN+VD+RLRQAQ+IIEELLKPVDES D  KRQQLRELAMLNSN
Sbjct: 195 YEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLNSN 254

Query: 549 FREESPQPRASVSPFNSSGMKRAKTG 626
           FREESP P  SVSPFN+SGMKRAKTG
Sbjct: 255 FREESPGPSGSVSPFNTSGMKRAKTG 280


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