BLASTX nr result

ID: Cnidium21_contig00005237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005237
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511464.1| mannose-1-phosphate guanyltransferase, putat...   131   2e-34
ref|XP_002318629.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-34
ref|XP_002322146.1| predicted protein [Populus trichocarpa] gi|2...   131   9e-34
gb|ABR14736.1| GDP-mannose pyrophosphorylase, partial [Gossypium...   129   3e-33
gb|AAN77308.1| Putative GDP-mannose pyrophosphorylase [Oryza sat...   128   2e-32

>ref|XP_002511464.1| mannose-1-phosphate guanyltransferase, putative [Ricinus communis]
           gi|223550579|gb|EEF52066.1| mannose-1-phosphate
           guanyltransferase, putative [Ricinus communis]
          Length = 415

 Score =  131 bits (329), Expect(2) = 2e-34
 Identities = 66/82 (80%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
 Frame = -1

Query: 238 KLIPNLSQIYLVGFYEGREFALYVSSISNELKVTVRYLREDKPHDLACGLYKFRD---QD 68
           K IPNL+QIYLVGFYE REFALYVSSISNELK+ VRYLREDKPH  A GLY FRD   +D
Sbjct: 51  KRIPNLAQIYLVGFYEEREFALYVSSISNELKIPVRYLREDKPHGSAGGLYNFRDLIMED 110

Query: 67  NLSHIFLLNCDVCSSFPLPEML 2
           + SHIFLLNCDVC SFPLPEML
Sbjct: 111 SPSHIFLLNCDVCCSFPLPEML 132



 Score = 41.2 bits (95), Expect(2) = 2e-34
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = -3

Query: 416 MVSSDEKVVAVIMVGGPTKGIEF 348
           M SSDEKVVAVIMVGGPTKG  F
Sbjct: 1   MGSSDEKVVAVIMVGGPTKGTRF 23


>ref|XP_002318629.1| predicted protein [Populus trichocarpa] gi|222859302|gb|EEE96849.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  132 bits (333), Expect(2) = 4e-34
 Identities = 67/82 (81%), Positives = 71/82 (86%), Gaps = 3/82 (3%)
 Frame = -1

Query: 238 KLIPNLSQIYLVGFYEGREFALYVSSISNELKVTVRYLREDKPHDLACGLYKFRD---QD 68
           K IPNL+QIYLVGFYE REFALYVSSISNELKV+VRYLREDKPH  A GL+ FRD   +D
Sbjct: 51  KKIPNLTQIYLVGFYEEREFALYVSSISNELKVSVRYLREDKPHGSAGGLFNFRDLIMED 110

Query: 67  NLSHIFLLNCDVCSSFPLPEML 2
           N SHIFLLNCDVC SFPLPEML
Sbjct: 111 NPSHIFLLNCDVCCSFPLPEML 132



 Score = 38.5 bits (88), Expect(2) = 4e-34
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -3

Query: 416 MVSSDEKVVAVIMVGGPTKGIEF 348
           M SS+E+VVAVIMVGGPTKG  F
Sbjct: 1   MGSSEERVVAVIMVGGPTKGTRF 23


>ref|XP_002322146.1| predicted protein [Populus trichocarpa] gi|222869142|gb|EEF06273.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  131 bits (330), Expect(2) = 9e-34
 Identities = 67/82 (81%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
 Frame = -1

Query: 238 KLIPNLSQIYLVGFYEGREFALYVSSISNELKVTVRYLREDKPHDLACGLYKFRD---QD 68
           K IPNL+QIYLVGFYE REFALYVSSISNELKV VRYLREDKPH  A GLY FRD   +D
Sbjct: 51  KKIPNLAQIYLVGFYEEREFALYVSSISNELKVPVRYLREDKPHGSAGGLYNFRDLIMED 110

Query: 67  NLSHIFLLNCDVCSSFPLPEML 2
           + SHIFLLNCDVC SFPLPEML
Sbjct: 111 SPSHIFLLNCDVCCSFPLPEML 132



 Score = 38.5 bits (88), Expect(2) = 9e-34
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -3

Query: 416 MVSSDEKVVAVIMVGGPTKGIEF 348
           M SS+E+VVAVIMVGGPTKG  F
Sbjct: 1   MGSSEERVVAVIMVGGPTKGTRF 23


>gb|ABR14736.1| GDP-mannose pyrophosphorylase, partial [Gossypium hirsutum]
          Length = 291

 Score =  129 bits (324), Expect(2) = 3e-33
 Identities = 65/82 (79%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
 Frame = -1

Query: 238 KLIPNLSQIYLVGFYEGREFALYVSSISNELKVTVRYLREDKPHDLACGLYKFRD---QD 68
           K IPNL+QIYLVGFYE REFA+YVSSIS EL+V VRYLREDKPH  A GLY FRD   +D
Sbjct: 51  KRIPNLAQIYLVGFYEEREFAMYVSSISTELRVPVRYLREDKPHGSAGGLYNFRDLIMED 110

Query: 67  NLSHIFLLNCDVCSSFPLPEML 2
           N SHIFLLNCDVC SFPLPEML
Sbjct: 111 NPSHIFLLNCDVCCSFPLPEML 132



 Score = 38.9 bits (89), Expect(2) = 3e-33
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -3

Query: 407 SDEKVVAVIMVGGPTKGIEF 348
           SDEKVVAVIMVGGPTKG  F
Sbjct: 4   SDEKVVAVIMVGGPTKGTRF 23


>gb|AAN77308.1| Putative GDP-mannose pyrophosphorylase [Oryza sativa Japonica
           Group]
          Length = 376

 Score =  128 bits (321), Expect(2) = 2e-32
 Identities = 64/81 (79%), Positives = 70/81 (86%), Gaps = 3/81 (3%)
 Frame = -1

Query: 235 LIPNLSQIYLVGFYEGREFALYVSSISNELKVTVRYLREDKPHDLACGLYKFRD---QDN 65
           +IPNL+QIYLVGFYE REFALYVSSISNEL+V VRYLREDKPH  A GLY FRD   +D+
Sbjct: 42  MIPNLAQIYLVGFYEEREFALYVSSISNELRVPVRYLREDKPHGSAGGLYSFRDYIMEDS 101

Query: 64  LSHIFLLNCDVCSSFPLPEML 2
            SHI LLNCDVCSSFPLP+ML
Sbjct: 102 PSHIVLLNCDVCSSFPLPDML 122



 Score = 37.4 bits (85), Expect(2) = 2e-32
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -3

Query: 416 MVSSDEKVVAVIMVGGPTKGIEF 348
           M +S+++VVAVIMVGGPTKG  F
Sbjct: 1   MAASEQRVVAVIMVGGPTKGTRF 23


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