BLASTX nr result

ID: Cnidium21_contig00005214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005214
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]...   194   4e-47
gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]          192   1e-46
ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vit...   185   1e-44
ref|XP_002318764.1| predicted protein [Populus trichocarpa] gi|2...   180   4e-43
ref|XP_002322296.1| predicted protein [Populus trichocarpa] gi|2...   177   5e-42

>gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
           gi|158147060|gb|ABW22631.1| bHLH transcription factor
           Upa20 [Capsicum annuum] gi|158147061|gb|ABW22632.1| bHLH
           transcription factor Upa20 [Capsicum annuum]
          Length = 340

 Score =  194 bits (492), Expect = 4e-47
 Identities = 103/172 (59%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3   QATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 182
           QATDSHSLAERVRREKISERMK+LQ+LVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM
Sbjct: 170 QATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 229

Query: 183 KIGSVNPMLYDFGMDLEAFMIKPEVQNQSSRLEXXXXXXXXXXXXXXXXXNIFNTTSGGY 362
           K+ S+NPM YDFGMDL+A M++P+ QN S  LE                  +   T+ GY
Sbjct: 230 KLASLNPMYYDFGMDLDALMVRPDDQNLSG-LETQLPNIQQASTTTSQAAEVIPNTNSGY 288

Query: 363 SVMDTSTLHQLQQVQMSNIMCQ--PQLLWDVDENRQKIINHSSFTNNLSSYH 512
             +D S     QQ    N + Q   QLLW  ++ RQKIIN S F+NN  S+H
Sbjct: 289 PFLDNSASLMFQQAHFPNSIHQGIGQLLWGAEDQRQKIINQSGFSNNFCSFH 340


>gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
          Length = 330

 Score =  192 bits (487), Expect = 1e-46
 Identities = 102/172 (59%), Positives = 117/172 (68%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3   QATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 182
           QATDSHSLAERVRREKISERMK+LQ+LVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM
Sbjct: 159 QATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 218

Query: 183 KIGSVNPMLYDFGMDLEAFMIKPEVQNQSSRLEXXXXXXXXXXXXXXXXXNIFNTTSGGY 362
           K+ S+NPM YDFGMDL+A M++P+ Q+ S                      +   T+ GY
Sbjct: 219 KLTSLNPMYYDFGMDLDALMVRPDDQSLSGLETQMANIQQGSTTTTSQAAEVIANTNSGY 278

Query: 363 SVMDTSTLHQLQQVQMSNIMCQ--PQLLWDVDENRQKIINHSSFTNNLSSYH 512
             +D ST    QQ    N + Q   QLLW  DE  QKIIN S F+NN  S+H
Sbjct: 279 QFLDNSTSLMFQQSHFPNSIPQGIGQLLWGADEQTQKIINQSGFSNNFCSFH 330


>ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
           gi|297734492|emb|CBI15739.3| unnamed protein product
           [Vitis vinifera]
          Length = 349

 Score =  185 bits (470), Expect = 1e-44
 Identities = 107/174 (61%), Positives = 119/174 (68%), Gaps = 4/174 (2%)
 Frame = +3

Query: 3   QATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 182
           QATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM
Sbjct: 177 QATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 236

Query: 183 KIGSVNPMLYDFGMDLEAFMIKPE-VQNQSSRLEXXXXXXXXXXXXXXXXXNIFNTTSGG 359
           K+ SVNPM YDFGMDL+A M++PE +   +S L                    F T +  
Sbjct: 237 KLASVNPMFYDFGMDLDALMVRPERLSALTSPLPSLQQCSPSQPTAYADTTTTF-TATNN 295

Query: 360 YSVMDTSTLHQLQQVQMSNIMCQP--QLLWDVDENRQKIINHSS-FTNNLSSYH 512
           Y VMDTS      Q Q  N+  Q    LLWDVD+ RQK IN S   +NNL S++
Sbjct: 296 YPVMDTSASILFHQGQRLNVFSQDNGSLLWDVDDQRQKFINPSGLISNNLCSFN 349


>ref|XP_002318764.1| predicted protein [Populus trichocarpa] gi|222859437|gb|EEE96984.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  180 bits (457), Expect = 4e-43
 Identities = 100/182 (54%), Positives = 119/182 (65%), Gaps = 12/182 (6%)
 Frame = +3

Query: 3   QATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 182
           QATDSHSLAERVRREKISERMK+LQ LVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM
Sbjct: 178 QATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 237

Query: 183 KIGSVNPMLYDFGMDLEAFMIKPE----------VQNQSSRLEXXXXXXXXXXXXXXXXX 332
           K+ SVNPM YDFGM+L+AFM++PE             Q S ++                 
Sbjct: 238 KLASVNPMFYDFGMELDAFMVRPERLSSMSPPLPSLQQCSPIQPTAFADAAAAATTTATP 297

Query: 333 NIFNTTSGGYSVMDTSTLHQLQQVQMSNIMCQP--QLLWDVDENRQKIINHSSFTNNLSS 506
                T+  Y ++D ST   LQ ++ S    +    L+WDVDE RQK ++ S  T+NL S
Sbjct: 298 TTSFATANNYPLIDNSTSLLLQGMRPSAFTTEDSCNLMWDVDERRQKFLSPSGLTSNLCS 357

Query: 507 YH 512
           +H
Sbjct: 358 FH 359


>ref|XP_002322296.1| predicted protein [Populus trichocarpa] gi|222869292|gb|EEF06423.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  177 bits (448), Expect = 5e-42
 Identities = 98/178 (55%), Positives = 117/178 (65%), Gaps = 8/178 (4%)
 Frame = +3

Query: 3   QATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 182
           QATDSHSLAERVRRE+ISERMK+LQ LVPGCDK+TGKALMLDEIINYVQSLQNQVEFLSM
Sbjct: 180 QATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQVEFLSM 239

Query: 183 KIGSVNPMLYDFGMDLEAFMIKPE-VQNQSSRLEXXXXXXXXXXXXXXXXXN----IFNT 347
           K+ SVNP+LYDFGMD +AFM++PE + + S  L                  +     F T
Sbjct: 240 KLASVNPLLYDFGMDRDAFMVRPERLSSMSPPLPSLQHNSPIQPTAFADTASATTATFAT 299

Query: 348 TSGGYSVMDTSTLHQLQQVQMSNIMCQPQ---LLWDVDENRQKIINHSSFTNNLSSYH 512
               Y ++D S    LQ ++ S+         L+WDVDE RQK +N S    NL S+H
Sbjct: 300 EENNYPLIDNSATLFLQGMRPSDFTTHQDSGYLMWDVDEQRQKFLNPSGLATNLCSFH 357


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