BLASTX nr result

ID: Cnidium21_contig00005193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005193
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553891.1| PREDICTED: succinate dehydrogenase [ubiquino...   458   e-126
ref|XP_003547685.1| PREDICTED: succinate dehydrogenase [ubiquino...   453   e-125
ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus c...   448   e-123
ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquino...   443   e-122
gb|AFK34767.1| unknown [Medicago truncatula]                          440   e-121

>ref|XP_003553891.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
            2, mitochondrial-like [Glycine max]
          Length = 277

 Score =  458 bits (1178), Expect = e-126
 Identities = 213/251 (84%), Positives = 228/251 (90%)
 Frame = -1

Query: 1206 KLQLFRAHATEIESQTREPTARSDPALKTFQIYRWSPENPSKPQLQDYKIDLSQCGPMVL 1027
            KL L RAHA+E ++Q  EP AR  P LKTFQIYRWSPENPSKP+L+DY+I+L +CGPMVL
Sbjct: 20   KLALLRAHASEAQAQQVEPKARGTPTLKTFQIYRWSPENPSKPELKDYQINLKECGPMVL 79

Query: 1026 DALIKIKNELDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISDAKEVSMITPLPHMF 847
            DALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI      + ITPLPHMF
Sbjct: 80   DALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSEGAATTITPLPHMF 139

Query: 846  VIKDLVVDMTNFYNQYKSIEPWLKRKSENKNGREILQSKKDRAKLDGMYECILCACCSTS 667
            VIKDLVVDMTNFYNQYKSIEPWLKRK+  + G+EILQSKK+R KLDGMYECILCACCSTS
Sbjct: 140  VIKDLVVDMTNFYNQYKSIEPWLKRKNPPEPGKEILQSKKEREKLDGMYECILCACCSTS 199

Query: 666  CPSYWWNPESYLGPAALLHANRWIMDSRDEYTSERLDAINDEFKLYRCHTILNCARACPK 487
            CPSYWWNPESYLGPAALLHANRWI DSRDEYT ERLDAINDEFKLYRCHTILNCARACPK
Sbjct: 200  CPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAINDEFKLYRCHTILNCARACPK 259

Query: 486  GLNPGKQISNI 454
            GLNPGKQIS+I
Sbjct: 260  GLNPGKQISHI 270


>ref|XP_003547685.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
            2, mitochondrial-like [Glycine max]
          Length = 279

 Score =  453 bits (1165), Expect = e-125
 Identities = 212/253 (83%), Positives = 228/253 (90%), Gaps = 2/253 (0%)
 Frame = -1

Query: 1206 KLQLFRAHATEIESQTREPTARSDPALKTFQIYRWSPENPSKPQLQDYKIDLSQCGPMVL 1027
            KL + RAHA+E ++Q  EP AR  P LKTFQIYRW+PENPSKP+L+DY+I+L +CGPMVL
Sbjct: 20   KLAILRAHASEAQAQQVEPKARETPTLKTFQIYRWNPENPSKPELKDYQINLKECGPMVL 79

Query: 1026 DALIKIKNELDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISDAKE--VSMITPLPH 853
            DALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI   K    + ITPLPH
Sbjct: 80   DALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSEKNSAATTITPLPH 139

Query: 852  MFVIKDLVVDMTNFYNQYKSIEPWLKRKSENKNGREILQSKKDRAKLDGMYECILCACCS 673
            MFVIKDLVVDMTNFYNQYKSIEPWLKRK+    G+EILQSKK+R KLDGMYECILCACCS
Sbjct: 140  MFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPVPGKEILQSKKEREKLDGMYECILCACCS 199

Query: 672  TSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTSERLDAINDEFKLYRCHTILNCARAC 493
            TSCPSYWWNPESYLGPAALLHANRWI DSRDEYT ERLDAINDEFKLYRCHTILNCARAC
Sbjct: 200  TSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAINDEFKLYRCHTILNCARAC 259

Query: 492  PKGLNPGKQISNI 454
            PKGLNPGKQIS+I
Sbjct: 260  PKGLNPGKQISHI 272


>ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus communis]
            gi|223533696|gb|EEF35431.1| succinate dehydrogenase,
            putative [Ricinus communis]
          Length = 284

 Score =  448 bits (1153), Expect = e-123
 Identities = 213/253 (84%), Positives = 227/253 (89%), Gaps = 1/253 (0%)
 Frame = -1

Query: 1209 SKLQLFRAHATEIESQTREPTARSDPALKTFQIYRWSPENPSKPQLQDYKIDLSQCGPMV 1030
            S+L   R HA+E E+Q  EP A S  +LKTFQIYRW+P+NPSKP LQDYKIDL +CGPMV
Sbjct: 23   SRLIPTRFHASEAEAQKVEPKASSTASLKTFQIYRWNPDNPSKPTLQDYKIDLKECGPMV 82

Query: 1029 LDALIKIKNELDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISDAKEVSMITPLPHM 850
            LDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACLTKIS     S ITPLPHM
Sbjct: 83   LDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSGSTSSTITPLPHM 142

Query: 849  FVIKDLVVDMTNFYNQYKSIEPWLKRKSENK-NGREILQSKKDRAKLDGMYECILCACCS 673
            FVIKDLVVDMTNFYNQYKSIEPWLKRK+    +G+EI QSKKDRAKLDGMYECILCACCS
Sbjct: 143  FVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPVDGKEIPQSKKDRAKLDGMYECILCACCS 202

Query: 672  TSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTSERLDAINDEFKLYRCHTILNCARAC 493
            TSCPSYWWNPESYLGPAALLHANRWI DSRDEYT+ERLDAINDEFKLYRCHTILNCARAC
Sbjct: 203  TSCPSYWWNPESYLGPAALLHANRWISDSRDEYTNERLDAINDEFKLYRCHTILNCARAC 262

Query: 492  PKGLNPGKQISNI 454
            PKGLNPGKQI +I
Sbjct: 263  PKGLNPGKQIMHI 275


>ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
            2, mitochondrial-like [Cucumis sativus]
            gi|449492901|ref|XP_004159135.1| PREDICTED: succinate
            dehydrogenase [ubiquinone] iron-sulfur subunit 2,
            mitochondrial-like [Cucumis sativus]
          Length = 277

 Score =  443 bits (1140), Expect = e-122
 Identities = 211/253 (83%), Positives = 226/253 (89%), Gaps = 1/253 (0%)
 Frame = -1

Query: 1209 SKLQLFRAHATEIESQTREPTARSDPALKTFQIYRWSPENPSKPQLQDYKIDLSQCGPMV 1030
            S+    RAHA+E ++Q  +  A +   LKTF IYRW+P++PSKP+LQ+YKIDL +CGPMV
Sbjct: 19   SRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPSKPELQEYKIDLKECGPMV 78

Query: 1029 LDALIKIKNELDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISDAKEVSMITPLPHM 850
            LDALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIS   + S ITPLPHM
Sbjct: 79   LDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISSG-DSSTITPLPHM 137

Query: 849  FVIKDLVVDMTNFYNQYKSIEPWLKRKSENK-NGREILQSKKDRAKLDGMYECILCACCS 673
            FVIKDLVVDMTNFYNQYKSIEPWLKRKSE    G+EILQSKKDRAKLDGMYECILCACCS
Sbjct: 138  FVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECILCACCS 197

Query: 672  TSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTSERLDAINDEFKLYRCHTILNCARAC 493
            TSCPSYWWNPESYLGPAALLHANRWI DSRDEYT ERLDAINDEFKLYRCHTILNCARAC
Sbjct: 198  TSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAINDEFKLYRCHTILNCARAC 257

Query: 492  PKGLNPGKQISNI 454
            PKGLNPGKQI NI
Sbjct: 258  PKGLNPGKQIQNI 270


>gb|AFK34767.1| unknown [Medicago truncatula]
          Length = 278

 Score =  440 bits (1132), Expect = e-121
 Identities = 206/253 (81%), Positives = 227/253 (89%), Gaps = 1/253 (0%)
 Frame = -1

Query: 1209 SKLQLFRAHATEIESQTREPTARSDPALKTFQIYRWSPENPSKPQLQDYKIDLSQCGPMV 1030
            S+L L RAHA+E ++Q   P AR    LK FQIYRW+P+ PSKP+L++ +I+L +CGPMV
Sbjct: 19   SRLTLLRAHASEAQAQQASPKARDTTVLKKFQIYRWNPDTPSKPELKECEINLKECGPMV 78

Query: 1029 LDALIKIKNELDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISDAKEVSMITPLPHM 850
            LDALIKIKN++DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI DA   S ITPLPHM
Sbjct: 79   LDALIKIKNDIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPDAGMDSTITPLPHM 138

Query: 849  FVIKDLVVDMTNFYNQYKSIEPWLKRKS-ENKNGREILQSKKDRAKLDGMYECILCACCS 673
            FVIKDLVVDMTNFYNQYKSIEPWLKRKS   ++G+EI QSKKDRAKLDGMYECILCACCS
Sbjct: 139  FVIKDLVVDMTNFYNQYKSIEPWLKRKSPAEEDGKEIKQSKKDRAKLDGMYECILCACCS 198

Query: 672  TSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTSERLDAINDEFKLYRCHTILNCARAC 493
            TSCPSYWWNPESYLGPAALLHANRWI DSRDEYT ERL+AINDEFKLYRCHTILNCARAC
Sbjct: 199  TSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARAC 258

Query: 492  PKGLNPGKQISNI 454
            P+GLNPGKQI++I
Sbjct: 259  PEGLNPGKQIAHI 271


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