BLASTX nr result
ID: Cnidium21_contig00005182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00005182
(2115 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C... 570 0.0
ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C... 571 0.0
ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm... 576 0.0
ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein C... 554 0.0
ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein C... 552 0.0
>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
[Glycine max]
Length = 563
Score = 570 bits (1469), Expect(2) = 0.0
Identities = 277/343 (80%), Positives = 318/343 (92%)
Frame = -1
Query: 1401 RWSFVHSPDTIKKQEFSDTLPSASVQDLGVILMGAGYEVFLKGPSLYAFKGLAGRFAPIG 1222
RWSF+HS + I+KQEFS++LP AS+QD+G ILMGAGYEVFLKGPSLYAF+GLAGR AP+G
Sbjct: 215 RWSFLHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPSLYAFQGLAGRLAPVG 274
Query: 1221 VHIALLLIMAGGTLSAAGSFRGSVTVPQGLNFVAGDVLEPSGFLSTPSDAFSTEVHVNKF 1042
VHIALLLIMAGGTLSA GSFRGSVTVPQGLNFV GDVL P GFLS+P+DAF+TE+HVNKF
Sbjct: 275 VHIALLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLAPFGFLSSPTDAFNTEIHVNKF 334
Query: 1041 YMEYYESGEVSQFYTDLSLYDLEGKEVLRKTIKVNDPLRYGGITIYQTDWSISALQVLKD 862
M+YYESGEVSQF+TDLSL +++GKEV+RKTI VNDPLRYGGITIYQTDWSISALQ+LKD
Sbjct: 335 SMDYYESGEVSQFHTDLSLRNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKD 394
Query: 861 GEGPFNLAMAPLQMNGGDKKLYGTILPVGSVDSPNVKGISMLARDLQSVVLYDQEGKFAG 682
EGP+NLAMAPLQ+N GDKKL+GT LPVG ++SP+VKGISMLARDLQS+VLYD+EGKFAG
Sbjct: 395 NEGPYNLAMAPLQIN-GDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFAG 453
Query: 681 IRRPNSKLPIEIDGSKIEVLDAIGSSGLNLKTDPGVPVVYAGFGALMLTTCISFLSHSQI 502
+RRPNSKLPI IDGS+I ++DAIGSSGL LKTDPGVPVVYAGFGALM+TTCIS+LSHSQI
Sbjct: 454 VRRPNSKLPINIDGSEIVIVDAIGSSGLELKTDPGVPVVYAGFGALMITTCISYLSHSQI 513
Query: 501 WALQDGTSVVVGGKSNRAKAEFPDAINRLLDQVPEIVASSQSK 373
WALQDGT+V VGGK+NRAK EFP+ ++RLLD+VPEIV S+ K
Sbjct: 514 WALQDGTTVFVGGKTNRAKMEFPEEMSRLLDKVPEIVESNLPK 556
Score = 166 bits (419), Expect(2) = 0.0
Identities = 94/217 (43%), Positives = 125/217 (57%), Gaps = 14/217 (6%)
Frame = -3
Query: 2110 ISSMETPTLNTTHTSMYLSSKPQTHLIKSPFF-------PYNNTKHGLYNNKNFNFFTLK 1952
+ ++ +NT++ + PQTH +K P F P++N+ HG K + L
Sbjct: 1 MKALSLSAINTSNPCL-----PQTHFLKVPIFHPFFRFKPFSNSSHGA---KRAHTLPLT 52
Query: 1951 VTCKLTKTSKDSVKTKN----LIVGPADKAPLLSE---KGSASSERDSQTKPGKKKTTGE 1793
++CKL + + K K+ +++ A PL + G + +S K G
Sbjct: 53 ISCKLKNSQEMKNKGKSVSQKIVLSEASPPPLTEDDKNNGDSKDVPESSKKKGGLSGVAN 112
Query: 1792 MLLRRYXXXXXXXXXXXXLAIGEMFTIAGLMAIGTLIDQGEAPGYYFQKYPEENPVFGFL 1613
ML R+ LAIGEMF +A LMA+GT IDQGEAP +YFQKYPE++PVFGF
Sbjct: 113 MLRRK----TLQILSNLPLAIGEMFAVASLMALGTFIDQGEAPDFYFQKYPEDHPVFGFF 168
Query: 1612 TWRWILPLGFDHMFTSPIFLGILVLLGASLMACTSTT 1502
TWRW+L LGFDHMFTSPIFLG+L LLGASLMACT TT
Sbjct: 169 TWRWVLTLGFDHMFTSPIFLGVLALLGASLMACTYTT 205
>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Vitis
vinifera] gi|297741415|emb|CBI32546.3| unnamed protein
product [Vitis vinifera]
Length = 557
Score = 571 bits (1471), Expect(2) = 0.0
Identities = 276/343 (80%), Positives = 316/343 (92%)
Frame = -1
Query: 1401 RWSFVHSPDTIKKQEFSDTLPSASVQDLGVILMGAGYEVFLKGPSLYAFKGLAGRFAPIG 1222
RW+F+HS + I+KQEFS++LP ASV+DLGV+LMGAGYEVFLKGPSLYAFKGLAGRFAPIG
Sbjct: 209 RWNFLHSAEAIRKQEFSESLPKASVRDLGVVLMGAGYEVFLKGPSLYAFKGLAGRFAPIG 268
Query: 1221 VHIALLLIMAGGTLSAAGSFRGSVTVPQGLNFVAGDVLEPSGFLSTPSDAFSTEVHVNKF 1042
VH+A+LLIM GGTLSA GSFRGSVTVPQGLNFV GDVL PSGFLSTP+ AF TEVHVN+F
Sbjct: 269 VHLAMLLIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLSPSGFLSTPTKAFDTEVHVNRF 328
Query: 1041 YMEYYESGEVSQFYTDLSLYDLEGKEVLRKTIKVNDPLRYGGITIYQTDWSISALQVLKD 862
YM+YY+SGEV QF+TDLSL+DL GKEV+RKTI VNDPLR+ GITIYQTDWS SALQ+ KD
Sbjct: 329 YMDYYDSGEVLQFHTDLSLFDLNGKEVMRKTISVNDPLRFDGITIYQTDWSFSALQIRKD 388
Query: 861 GEGPFNLAMAPLQMNGGDKKLYGTILPVGSVDSPNVKGISMLARDLQSVVLYDQEGKFAG 682
EGPFNLAMAPL++N GDKKL+GT LPVG DSPNVKGISMLARDLQS+VLYD+EGKFAG
Sbjct: 389 DEGPFNLAMAPLKLN-GDKKLFGTFLPVGDSDSPNVKGISMLARDLQSIVLYDKEGKFAG 447
Query: 681 IRRPNSKLPIEIDGSKIEVLDAIGSSGLNLKTDPGVPVVYAGFGALMLTTCISFLSHSQI 502
+RRPNS LPI+IDG++I + DAIGSSGL+LKTDPGVP+VYAGFGALMLTTCIS+LSH+QI
Sbjct: 448 VRRPNSNLPIDIDGTRIVIEDAIGSSGLDLKTDPGVPIVYAGFGALMLTTCISYLSHTQI 507
Query: 501 WALQDGTSVVVGGKSNRAKAEFPDAINRLLDQVPEIVASSQSK 373
WALQDGT+VV+GGK+NRAK EFPD +N+LLD+VPE+V SS SK
Sbjct: 508 WALQDGTTVVIGGKTNRAKLEFPDEMNQLLDRVPELVESSLSK 550
Score = 161 bits (408), Expect(2) = 0.0
Identities = 93/195 (47%), Positives = 120/195 (61%), Gaps = 6/195 (3%)
Frame = -3
Query: 2068 SMYLSSKPQTHLIKSPFFPYNNTKHGLYNNKNFNFFTLKVTCKLTKTSKDSVKTKNLI-- 1895
+++L S K FFPY ++ +F +TCKL KTS+D +K+L
Sbjct: 11 TLFLKSPLLRSSFKPQFFPYTTQISSPCSSTPLSF---SITCKL-KTSEDGKSSKSLAKK 66
Query: 1894 VGPADKAPLLSEKGSASSERDSQTKPGKKKTTGEM----LLRRYXXXXXXXXXXXXLAIG 1727
+ ++ AP +SE G+ + E +Q KP K G L++R+ LAIG
Sbjct: 67 IVLSEGAPAVSEDGAGNGE--AQPKPASKGGGGGGGFGGLVKRFPRKVLSRLSNLPLAIG 124
Query: 1726 EMFTIAGLMAIGTLIDQGEAPGYYFQKYPEENPVFGFLTWRWILPLGFDHMFTSPIFLGI 1547
EMFT+A LMA+GT IDQGEAP YYFQK+PE+NPV GF TWRW+L LGFDHMF+SPIFLG+
Sbjct: 125 EMFTVAALMALGTAIDQGEAPDYYFQKFPEDNPVLGFFTWRWVLTLGFDHMFSSPIFLGM 184
Query: 1546 LVLLGASLMACTSTT 1502
L LL SLMACT TT
Sbjct: 185 LALLATSLMACTYTT 199
>ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis]
gi|223541761|gb|EEF43309.1| conserved hypothetical
protein [Ricinus communis]
Length = 556
Score = 576 bits (1485), Expect(2) = 0.0
Identities = 280/340 (82%), Positives = 316/340 (92%)
Frame = -1
Query: 1401 RWSFVHSPDTIKKQEFSDTLPSASVQDLGVILMGAGYEVFLKGPSLYAFKGLAGRFAPIG 1222
RW+F+HS + I+KQEF+DTLP AS+QD+GVILMGAGYEVFLKGPSLYAFKGLAGRFAPIG
Sbjct: 207 RWNFLHSAEAIRKQEFADTLPQASIQDVGVILMGAGYEVFLKGPSLYAFKGLAGRFAPIG 266
Query: 1221 VHIALLLIMAGGTLSAAGSFRGSVTVPQGLNFVAGDVLEPSGFLSTPSDAFSTEVHVNKF 1042
VH+A+LLIMAG TL+A GSFRGSVTVPQGLNFV GDVL PSGFLSTP++AF+TEVHVNKF
Sbjct: 267 VHLAMLLIMAGATLTATGSFRGSVTVPQGLNFVVGDVLGPSGFLSTPTEAFNTEVHVNKF 326
Query: 1041 YMEYYESGEVSQFYTDLSLYDLEGKEVLRKTIKVNDPLRYGGITIYQTDWSISALQVLKD 862
YM+YY+SGEVSQFY+DLSLYD++GKEVLRKTI VN+PLRYGG TIYQTDWS SALQ+ K+
Sbjct: 327 YMDYYDSGEVSQFYSDLSLYDIDGKEVLRKTISVNNPLRYGGFTIYQTDWSFSALQIRKN 386
Query: 861 GEGPFNLAMAPLQMNGGDKKLYGTILPVGSVDSPNVKGISMLARDLQSVVLYDQEGKFAG 682
EGPFNLAMAPL++N GDKKL+GT LPVG V+SPNVKGISMLARDLQS+VLYDQEGKF G
Sbjct: 387 DEGPFNLAMAPLKIN-GDKKLFGTFLPVGDVNSPNVKGISMLARDLQSIVLYDQEGKFVG 445
Query: 681 IRRPNSKLPIEIDGSKIEVLDAIGSSGLNLKTDPGVPVVYAGFGALMLTTCISFLSHSQI 502
+RRPNSKLPI+IDG++I + DAIGS+GL LKTDPGVPVVYAGFGALMLTTCIS+LSHSQI
Sbjct: 446 VRRPNSKLPIDIDGTRIVIEDAIGSTGLELKTDPGVPVVYAGFGALMLTTCISYLSHSQI 505
Query: 501 WALQDGTSVVVGGKSNRAKAEFPDAINRLLDQVPEIVASS 382
WALQDGTS+VVGGK+NRAK F D +NRLLDQVPEIV SS
Sbjct: 506 WALQDGTSMVVGGKTNRAKGVFEDEVNRLLDQVPEIVESS 545
Score = 150 bits (379), Expect(2) = 0.0
Identities = 89/190 (46%), Positives = 112/190 (58%), Gaps = 9/190 (4%)
Frame = -3
Query: 2044 QTHLIKSPFFPYNNTK-------HGLYNNKNFNFFTLKVTCKLTKTSKDSVKTKNLI--V 1892
+TH I F P+ N+ H L N + + L V+CKL + + K KN+ +
Sbjct: 13 KTHFIN--FHPFINSTIKLNPQIHILCNRRALS---LSVSCKLKTSKEVENKDKNVSRKI 67
Query: 1891 GPADKAPLLSEKGSASSERDSQTKPGKKKTTGEMLLRRYXXXXXXXXXXXXLAIGEMFTI 1712
++ AP +SE+G A + + K K +R LAIGEMF I
Sbjct: 68 LLSNSAPPVSEEGGAGNNGEIPDKAAKGGGGPLRFFKRLPRKVLSVLSNLPLAIGEMFAI 127
Query: 1711 AGLMAIGTLIDQGEAPGYYFQKYPEENPVFGFLTWRWILPLGFDHMFTSPIFLGILVLLG 1532
AGLMA+GT+IDQG+AP YFQ YPEENPV GF TWRWIL LGFDHMF+SP+FLG+L LLG
Sbjct: 128 AGLMALGTVIDQGQAPEIYFQNYPEENPVLGFFTWRWILTLGFDHMFSSPVFLGMLALLG 187
Query: 1531 ASLMACTSTT 1502
SLMACT TT
Sbjct: 188 LSLMACTYTT 197
>ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
[Cucumis sativus]
Length = 560
Score = 554 bits (1428), Expect(2) = 0.0
Identities = 264/343 (76%), Positives = 312/343 (90%)
Frame = -1
Query: 1401 RWSFVHSPDTIKKQEFSDTLPSASVQDLGVILMGAGYEVFLKGPSLYAFKGLAGRFAPIG 1222
RW+F+ S +TI+K E SD LP ASVQDLGV+LMGAGYEVF+KGP+LYAFKGLAGRFAPIG
Sbjct: 213 RWNFLQSGETIRKLECSDILPRASVQDLGVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIG 272
Query: 1221 VHIALLLIMAGGTLSAAGSFRGSVTVPQGLNFVAGDVLEPSGFLSTPSDAFSTEVHVNKF 1042
VH+A+LLIMAG TLSA GSFRGSVTVPQGLNFV GDVL PSGFL+ P++AF+TEVHVNKF
Sbjct: 273 VHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGFLAKPTEAFNTEVHVNKF 332
Query: 1041 YMEYYESGEVSQFYTDLSLYDLEGKEVLRKTIKVNDPLRYGGITIYQTDWSISALQVLKD 862
YM YY+SGE+ QFY+DLSL+DL GKEV+RKTI VN+PLRYGG TIYQTDW SALQ+LK+
Sbjct: 333 YMNYYDSGEIKQFYSDLSLFDLNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKN 392
Query: 861 GEGPFNLAMAPLQMNGGDKKLYGTILPVGSVDSPNVKGISMLARDLQSVVLYDQEGKFAG 682
EGPFNLA+APL++N GDKKLYGT LPVG V+SP+VKGISMLARDLQS+VLYDQEGKF G
Sbjct: 393 DEGPFNLAVAPLKIN-GDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDQEGKFVG 451
Query: 681 IRRPNSKLPIEIDGSKIEVLDAIGSSGLNLKTDPGVPVVYAGFGALMLTTCISFLSHSQI 502
+RRP+S+LPI+I+G KIE++DAIGS+GL LKTDPGVP+VYAGFGALMLTTC+S+LSHSQ+
Sbjct: 452 VRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQV 511
Query: 501 WALQDGTSVVVGGKSNRAKAEFPDAINRLLDQVPEIVASSQSK 373
WA+QDGT V+VGGK+NRAK EFP+ ++RLLD+VPEI+ S +K
Sbjct: 512 WAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEIIEPSYNK 554
Score = 150 bits (380), Expect(2) = 0.0
Identities = 93/208 (44%), Positives = 122/208 (58%), Gaps = 6/208 (2%)
Frame = -3
Query: 2107 SSMETPTLNTTHTSMYLSSKPQTHLIKSPFFPYNNTKHGLYNN----KNFNFFTLKVTCK 1940
S+ME LN + S+ SKP L+K+ F H ++++ + + VTCK
Sbjct: 9 STMERLILNNLNPSL---SKP--FLLKTSFL------HSVFSHQITLRTAQIRSFSVTCK 57
Query: 1939 LTKTSKDSV--KTKNLIVGPADKAPLLSEKGSASSERDSQTKPGKKKTTGEMLLRRYXXX 1766
K S+D N IV PL E+ S +++ KPG + + L++R
Sbjct: 58 -NKASQDKKLKNASNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSRSMK-LVKRLPKR 115
Query: 1765 XXXXXXXXXLAIGEMFTIAGLMAIGTLIDQGEAPGYYFQKYPEENPVFGFLTWRWILPLG 1586
LAIGEMFTIA LMA+GT+IDQGEAP +YFQKYPE+NP++GF WRWIL LG
Sbjct: 116 ILGALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFNWRWILTLG 175
Query: 1585 FDHMFTSPIFLGILVLLGASLMACTSTT 1502
FDHM++S IFLG+L LLG SLMACT TT
Sbjct: 176 FDHMYSSTIFLGMLALLGISLMACTYTT 203
>ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
[Cucumis sativus]
Length = 557
Score = 552 bits (1423), Expect(2) = 0.0
Identities = 263/342 (76%), Positives = 311/342 (90%)
Frame = -1
Query: 1398 WSFVHSPDTIKKQEFSDTLPSASVQDLGVILMGAGYEVFLKGPSLYAFKGLAGRFAPIGV 1219
W+F+ S +TI+K E SD LP ASVQDLGV+LMGAGYEVF+KGP+LYAFKGLAGRFAPIGV
Sbjct: 211 WNFLQSGETIRKLECSDILPRASVQDLGVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGV 270
Query: 1218 HIALLLIMAGGTLSAAGSFRGSVTVPQGLNFVAGDVLEPSGFLSTPSDAFSTEVHVNKFY 1039
H+A+LLIMAG TLSA GSFRGSVTVPQGLNFV GDVL PSGFL+ P++AF+TEVHVNKFY
Sbjct: 271 HLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGFLAKPTEAFNTEVHVNKFY 330
Query: 1038 MEYYESGEVSQFYTDLSLYDLEGKEVLRKTIKVNDPLRYGGITIYQTDWSISALQVLKDG 859
M YY+SGE+ QFY+DLSL+DL GKEV+RKTI VN+PLRYGG TIYQTDW SALQ+LK+
Sbjct: 331 MNYYDSGEIKQFYSDLSLFDLNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKND 390
Query: 858 EGPFNLAMAPLQMNGGDKKLYGTILPVGSVDSPNVKGISMLARDLQSVVLYDQEGKFAGI 679
EGPFNLA+APL++N GDKKLYGT LPVG V+SP+VKGISMLARDLQS+VLYDQEGKF G+
Sbjct: 391 EGPFNLAVAPLKIN-GDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDQEGKFVGV 449
Query: 678 RRPNSKLPIEIDGSKIEVLDAIGSSGLNLKTDPGVPVVYAGFGALMLTTCISFLSHSQIW 499
RRP+S+LPI+I+G KIE++DAIGS+GL LKTDPGVP+VYAGFGALMLTTC+S+LSHSQ+W
Sbjct: 450 RRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQVW 509
Query: 498 ALQDGTSVVVGGKSNRAKAEFPDAINRLLDQVPEIVASSQSK 373
A+QDGT V+VGGK+NRAK EFP+ ++RLLD+VPEI+ S +K
Sbjct: 510 AIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEIIEPSYNK 551
Score = 149 bits (375), Expect(2) = 0.0
Identities = 92/206 (44%), Positives = 120/206 (58%), Gaps = 6/206 (2%)
Frame = -3
Query: 2101 METPTLNTTHTSMYLSSKPQTHLIKSPFFPYNNTKHGLYNN----KNFNFFTLKVTCKLT 1934
ME LN + S+ SKP L+K+ F H ++++ + + VTCK
Sbjct: 1 MERLILNNLNPSL---SKP--FLLKTSFL------HSVFSHQITLRTAQIRSFSVTCK-N 48
Query: 1933 KTSKDSV--KTKNLIVGPADKAPLLSEKGSASSERDSQTKPGKKKTTGEMLLRRYXXXXX 1760
K S+D N IV PL E+ S +++ KPG + + L++R
Sbjct: 49 KASQDKKLKNASNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSRSMK-LVKRLPKRIL 107
Query: 1759 XXXXXXXLAIGEMFTIAGLMAIGTLIDQGEAPGYYFQKYPEENPVFGFLTWRWILPLGFD 1580
LAIGEMFTIA LMA+GT+IDQGEAP +YFQKYPE+NP++GF WRWIL LGFD
Sbjct: 108 GALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFNWRWILTLGFD 167
Query: 1579 HMFTSPIFLGILVLLGASLMACTSTT 1502
HM++S IFLG+L LLG SLMACT TT
Sbjct: 168 HMYSSTIFLGMLALLGISLMACTYTT 193